RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 B3GNT5Q9BYG0 378 aa21.26■□□□□ 0.99
SMG8-203ENST00000578922 NFS1Q9Y697 457 aa21.26■□□□□ 0.99
SMG8-203ENST00000578922 SCN5AQ14524 2016 aa21.26■□□□□ 0.99
SMG8-203ENST00000578922 TCRBV7S2A1N4TA0A589 114 aa21.26■□□□□ 0.99
SMG8-203ENST00000578922 DCDC2CA8MYV0 355 aa21.26■□□□□ 0.99
SMG8-203ENST00000578922 GABBR2O75899 941 aa21.26■□□□□ 0.99
SMG8-203ENST00000578922 GATMP50440 423 aa21.26■□□□□ 0.99
SMG8-203ENST00000578922 C1QTNF8P60827 252 aa21.26■□□□□ 0.99
SMG8-203ENST00000578922 BST2Q10589 180 aaKnown RBP21.26■□□□□ 0.99
SMG8-203ENST00000578922 TAF5Q15542 800 aa21.26■□□□□ 0.99
SMG8-203ENST00000578922 ATP13A4Q4VNC1 1196 aa21.26■□□□□ 0.99
SMG8-203ENST00000578922 ZFYVE27Q5T4F4 411 aa21.26■□□□□ 0.99
SMG8-203ENST00000578922 MICALCLQ6ZW33 695 aa21.26■□□□□ 0.99
SMG8-203ENST00000578922 CTU1Q7Z7A3 348 aaKnown RBP21.26■□□□□ 0.99
SMG8-203ENST00000578922 RHOT1Q8IXI2 618 aa21.26■□□□□ 0.99
SMG8-203ENST00000578922 MED10Q9BTT4 135 aa21.26■□□□□ 0.99
SMG8-203ENST00000578922 DNAI2Q9GZS0 605 aa21.26■□□□□ 0.99
SMG8-203ENST00000578922 CRISPLD2Q9H0B8 497 aa21.26■□□□□ 0.99
SMG8-203ENST00000578922 GGA2Q9UJY4 613 aa21.26■□□□□ 0.99
SMG8-203ENST00000578922 ATP11BQ9Y2G3 1177 aa21.26■□□□□ 0.99
SMG8-203ENST00000578922 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.26■□□□□ 0.99
SMG8-203ENST00000578922 SKIDA1Q1XH10 827 aa21.25■□□□□ 0.99
SMG8-203ENST00000578922 TTC19Q6DKK2 380 aaPredicted RBP21.25■□□□□ 0.99
SMG8-203ENST00000578922 FUKQ8N0W3 1084 aa21.25■□□□□ 0.99
SMG8-203ENST00000578922 TMEM86AQ8N2M4 240 aa21.25■□□□□ 0.99
SMG8-203ENST00000578922 URGCPQ8TCY9 931 aa21.25■□□□□ 0.99
SMG8-203ENST00000578922 ACSF2Q96CM8 615 aaPredicted RBP21.25■□□□□ 0.99
SMG8-203ENST00000578922 SYT15Q9BQS2 421 aa21.25■□□□□ 0.99
SMG8-203ENST00000578922 CRTAC1Q9NQ79 661 aa21.25■□□□□ 0.99
SMG8-203ENST00000578922 TBC1D13Q9NVG8 400 aa21.25■□□□□ 0.99
SMG8-203ENST00000578922 PCDH10Q9P2E7 1040 aa21.25■□□□□ 0.99
SMG8-203ENST00000578922 UTP11Q9Y3A2 253 aaKnown RBP21.25■□□□□ 0.99
SMG8-203ENST00000578922 ODC1P11926 461 aa21.24■□□□□ 0.99
SMG8-203ENST00000578922 LCP1P13796 627 aa21.24■□□□□ 0.99
SMG8-203ENST00000578922 MAN1A1P33908 653 aa21.24■□□□□ 0.99
SMG8-203ENST00000578922 RABGGTBP53611 331 aa21.24■□□□□ 0.99
SMG8-203ENST00000578922 BCAT1P54687 386 aa21.24■□□□□ 0.99
SMG8-203ENST00000578922 ANKRD33Q7Z3H0 272 aa21.24■□□□□ 0.99
SMG8-203ENST00000578922 CCDC50Q8IVM0 306 aa21.24■□□□□ 0.99
SMG8-203ENST00000578922 DNAJC5GQ8N7S2 189 aa21.24■□□□□ 0.99
SMG8-203ENST00000578922 SLC4A5Q9BY07 1137 aa21.24■□□□□ 0.99
SMG8-203ENST00000578922 TMEM161AQ9NX61 479 aa21.24■□□□□ 0.99
SMG8-203ENST00000578922 DNAJB4Q9UDY4 337 aa21.24■□□□□ 0.99
SMG8-203ENST00000578922 PRG3Q9Y2Y8 225 aaPredicted RBP21.24■□□□□ 0.99
SMG8-203ENST00000578922 MYBPHLA2RUH7 354 aa21.24■□□□□ 0.99
SMG8-203ENST00000578922 OR1G1P47890 313 aa21.24■□□□□ 0.99
SMG8-203ENST00000578922 LHX1P48742 406 aa21.24■□□□□ 0.99
SMG8-203ENST00000578922 PIGHQ14442 188 aaPredicted RBP21.24■□□□□ 0.99
SMG8-203ENST00000578922 AGBL2Q5U5Z8 902 aa21.24■□□□□ 0.99
SMG8-203ENST00000578922 TXNRD3NBQ6F5E7 133 aa21.24■□□□□ 0.99
SMG8-203ENST00000578922 CLEC4CQ8WTT0 213 aa21.24■□□□□ 0.99
SMG8-203ENST00000578922 PCDHB7Q9Y5E2 793 aa21.24■□□□□ 0.99
SMG8-203ENST00000578922 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.24■□□□□ 0.99
SMG8-203ENST00000578922 BEST1O76090 585 aa21.23■□□□□ 0.99
SMG8-203ENST00000578922 SETSIPP0DME0 302 aa21.23■□□□□ 0.99
SMG8-203ENST00000578922 GSCP56915 257 aaPredicted RBP21.23■□□□□ 0.99
SMG8-203ENST00000578922 UAP1Q16222 522 aaPredicted RBP21.23■□□□□ 0.99
SMG8-203ENST00000578922 FBXO46Q6PJ61 603 aaPredicted RBP21.23■□□□□ 0.99
SMG8-203ENST00000578922 PAQR9Q6ZVX9 377 aa21.23■□□□□ 0.99
SMG8-203ENST00000578922 YTHDF3Q7Z739 585 aaKnown RBP21.23■□□□□ 0.99
SMG8-203ENST00000578922 ZDHHC14Q8IZN3 488 aa21.23■□□□□ 0.99
SMG8-203ENST00000578922 ABI1Q8IZP0 508 aa21.23■□□□□ 0.99
SMG8-203ENST00000578922 RSPH1Q8WYR4 309 aa21.23■□□□□ 0.99
SMG8-203ENST00000578922 UROC1Q96N76 676 aa21.23■□□□□ 0.99
SMG8-203ENST00000578922 RAB17Q9H0T7 212 aa21.23■□□□□ 0.99
SMG8-203ENST00000578922 AMACRQ9UHK6 382 aa21.23■□□□□ 0.99
SMG8-203ENST00000578922 ANKRD65E5RJM6 399 aa21.23■□□□□ 0.99
SMG8-203ENST00000578922 PI4K2BG5E9Z4 385 aa21.23■□□□□ 0.99
SMG8-203ENST00000578922 INPPL1O15357 1258 aa21.23■□□□□ 0.99
SMG8-203ENST00000578922 PAPSS1O43252 624 aaPredicted RBP21.23■□□□□ 0.99
SMG8-203ENST00000578922 PSTPIP1O43586 416 aa21.23■□□□□ 0.99
SMG8-203ENST00000578922 DCLRE1AQ6PJP8 1040 aa21.23■□□□□ 0.99
SMG8-203ENST00000578922 TMEM110Q86TL2 294 aa21.23■□□□□ 0.99
SMG8-203ENST00000578922 PACS2Q86VP3 889 aa21.23■□□□□ 0.99
SMG8-203ENST00000578922 SLC13A5Q86YT5 568 aaPredicted RBP21.23■□□□□ 0.99
SMG8-203ENST00000578922 RNF25Q96BH1 459 aaPredicted RBP21.23■□□□□ 0.99
SMG8-203ENST00000578922 FAM193BQ96PV7 902 aaPredicted RBP21.23■□□□□ 0.99
SMG8-203ENST00000578922 HNRNPABQ99729 332 aaKnown RBP21.23■□□□□ 0.99
SMG8-203ENST00000578922 LRFN2Q9ULH4 789 aa21.23■□□□□ 0.99
SMG8-203ENST00000578922 HSPA8P11142 646 aaKnown RBP21.22■□□□□ 0.99
SMG8-203ENST00000578922 LBX1P52954 281 aa21.22■□□□□ 0.99
SMG8-203ENST00000578922 GUCY1A3Q02108 690 aa21.22■□□□□ 0.99
SMG8-203ENST00000578922 TRNP1Q6NT89 227 aa21.22■□□□□ 0.99
SMG8-203ENST00000578922 OLFML1Q6UWY5 402 aa21.22■□□□□ 0.99
SMG8-203ENST00000578922 METTL23Q86XA0 190 aa21.22■□□□□ 0.99
SMG8-203ENST00000578922 ARFGAP1Q8N6T3 406 aa21.22■□□□□ 0.99
SMG8-203ENST00000578922 RTP3Q9BQQ7 232 aa21.22■□□□□ 0.99
SMG8-203ENST00000578922 HEMGNQ9BXL5 484 aa21.22■□□□□ 0.99
SMG8-203ENST00000578922 HCSTQ9UBK5 93 aa21.22■□□□□ 0.99
SMG8-203ENST00000578922 GOLGA6L10A0A0M3HER8 536 aa21.21■□□□□ 0.99
SMG8-203ENST00000578922 FAM163BP0C2L3 166 aa21.21■□□□□ 0.99
SMG8-203ENST00000578922 FLT3P36888 993 aa21.21■□□□□ 0.99
SMG8-203ENST00000578922 ZNF844Q08AG5 666 aa21.21■□□□□ 0.99
SMG8-203ENST00000578922 SH3PXD2AQ5TCZ1 1133 aa21.21■□□□□ 0.99
SMG8-203ENST00000578922 DDX42Q86XP3 938 aaKnown RBP eCLIP21.21■□□□□ 0.99
SMG8-203ENST00000578922 RXFP2Q8WXD0 754 aa21.21■□□□□ 0.99
SMG8-203ENST00000578922 PCED1BQ96HM7 432 aa21.21■□□□□ 0.99
SMG8-203ENST00000578922 HERPUD2Q9BSE4 406 aa21.21■□□□□ 0.99
SMG8-203ENST00000578922 RHOBTB2Q9BYZ6 727 aa21.21■□□□□ 0.99
SMG8-203ENST00000578922 ZWILCHQ9H900 591 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms