RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 TMEM259Q4ZIN3 620 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 SYT10Q6XYQ8 523 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 C16orf59Q7L2K0 433 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 MB21D2Q8IYB1 491 aaPredicted RBP3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 VPS37AQ8NEZ2 397 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 UBA3Q8TBC4 463 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 SPPL2BQ8TCT7 592 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 RNF25Q96BH1 459 aaPredicted RBP3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 PAGE5Q96GU1 130 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 AIFM3Q96NN9 605 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 TRMT61BQ9BVS5 477 aaKnown RBP3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 MCOLN1Q9GZU1 580 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 UNC93B1Q9H1C4 597 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 CBX8Q9HC52 389 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 PDE11AQ9HCR9 933 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 FANCLQ9NW38 375 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 STX18Q9P2W9 335 aaKnown RBP3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 CDV3Q9UKY7 258 aaKnown RBP3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 TPX2Q9ULW0 747 aaKnown RBP3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 TBX20Q9UMR3 447 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 USP20Q9Y2K6 914 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 TRPM1Q7Z4N2 1603 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 NT5C1B-RDH14C9J2C7 533 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 PER2O15055 1255 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 SGPL1O95470 568 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 ANXA6P08133 673 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 MAPK8P45983 427 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 PLA2G4AP47712 749 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 CCT5P48643 541 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 CLK3P49761 638 aaKnown RBP3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 DUSP3P51452 185 aaPredicted RBP3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 NDUFA8P51970 172 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 GEMP55040 296 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 SULT2A1Q06520 285 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 BCL2L1Q07817 233 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 FOXD4Q12950 439 aaPredicted RBP3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 PTK6Q13882 451 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 DRAP1Q14919 205 aaPredicted RBP3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 KIF19Q2TAC6 998 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 NAPEPLDQ6IQ20 393 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 DOK6Q6PKX4 331 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 MTHFD1LQ6UB35 978 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 TMC5Q6UXY8 1006 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 C15orf52Q6ZUT6 534 aaKnown RBP3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 NIPA1Q7RTP0 329 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 FRMD5Q7Z6J6 570 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 RASEFQ8IZ41 740 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 SLC25A41Q8N5S1 370 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 DBF4BQ8NFT6 615 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 TMEM159Q96B96 161 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 REXO5Q96IC2 774 aaKnown RBP3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 FEM1CQ96JP0 617 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 SENP8Q96LD8 212 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 PANX2Q96RD6 677 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 HAPLN3Q96S86 360 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 KCNS3Q9BQ31 491 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 RUBCNLQ9H714 662 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 DNAJC17Q9NVM6 304 aaKnown RBP3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 SPASTQ9UBP0 616 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 DNMT3LQ9UJW3 386 aa3.05□□□□□ -1.92
SMCHD1-203ENST00000577880 A6NNZ2 444 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 RHPN2P1A8MT19 583 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 PGRMC1O00264 195 aaKnown RBP3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 MAN2B1O00754 1011 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 MSH4O15457 936 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 CCL16O15467 120 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 HS6ST1O60243 411 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 TBC1D4O60343 1298 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 DTNBO60941 627 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 PALMO75781 387 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 FSBPO95073 299 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 ARP10275 920 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 SMPD1P17405 629 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 GPD1P21695 349 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 FSHRP23945 695 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 MLH1P40692 756 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 RPL21P46778 160 aaKnown RBP3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 RFX3P48380 749 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 RASSF2P50749 326 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 TKTL1P51854 596 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 ZNF445P59923 1031 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 SMAD3P84022 425 aaKnown RBP3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 TUSC3Q13454 348 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 ACAP2Q15057 778 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 TCEA2Q15560 299 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 RBBP7Q16576 425 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 TUBB8Q3ZCM7 444 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 BOLA3Q53S33 107 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 FAXCQ5TGI0 409 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 DAB2IPQ5VWQ8 1189 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 SLC30A10Q6XR72 485 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 C11orf57Q6ZUT1 292 aaPredicted RBP3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 KIRREL3Q8IZU9 778 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 LGI2Q8N0V4 545 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 CYP4X1Q8N118 509 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 C10orf53Q8N6V4 93 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 ZNF579Q8NAF0 562 aaKnown RBP3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 LINC00301Q8NCQ3 95 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 KREMEN2Q8NCW0 462 aa3.04□□□□□ -1.92
SMCHD1-203ENST00000577880 MAGEC3Q8TD91 643 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms