RNA–Protein interactions for RNA: ENST00000577578.5

CSNK1D-206, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 928 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-206ENST00000577578 DGKKQ5KSL6 1271 aa13.22□□□□□ -0.29
CSNK1D-206ENST00000577578 KRT39Q6A163 491 aa13.22□□□□□ -0.29
CSNK1D-206ENST00000577578 ACOT1Q86TX2 421 aa13.22□□□□□ -0.29
CSNK1D-206ENST00000577578 ADSSL1Q8N142 457 aa13.22□□□□□ -0.29
CSNK1D-206ENST00000577578 NUP93Q8N1F7 819 aa13.22□□□□□ -0.29
CSNK1D-206ENST00000577578 SYNPOQ8N3V7 929 aa13.22□□□□□ -0.29
CSNK1D-206ENST00000577578 ARL14EPQ8N8R7 260 aaPredicted RBP13.22□□□□□ -0.29
CSNK1D-206ENST00000577578 OSCP1Q8WVF1 389 aa13.22□□□□□ -0.29
CSNK1D-206ENST00000577578 OVCA2Q8WZ82 227 aa13.22□□□□□ -0.29
CSNK1D-206ENST00000577578 SMARCE1Q969G3 411 aa13.22□□□□□ -0.29
CSNK1D-206ENST00000577578 KCNK16Q96T55 309 aa13.22□□□□□ -0.29
CSNK1D-206ENST00000577578 IMPG2Q9BZV3 1241 aa13.22□□□□□ -0.29
CSNK1D-206ENST00000577578 NIF3L1Q9GZT8 377 aa13.22□□□□□ -0.29
CSNK1D-206ENST00000577578 EBF3Q9H4W6 596 aa13.22□□□□□ -0.29
CSNK1D-206ENST00000577578 APOBEC3GQ9HC16 384 aaKnown RBP13.22□□□□□ -0.29
CSNK1D-206ENST00000577578 TRPC7Q9HCX4 862 aa13.22□□□□□ -0.29
CSNK1D-206ENST00000577578 DMAP1Q9NPF5 467 aaPredicted RBP13.22□□□□□ -0.29
CSNK1D-206ENST00000577578 HOOK1Q9UJC3 728 aaKnown RBP13.22□□□□□ -0.29
CSNK1D-206ENST00000577578 CIZ1Q9ULV3 898 aaPredicted RBP13.22□□□□□ -0.29
CSNK1D-206ENST00000577578 CEP250Q9BV73 2442 aa13.22□□□□□ -0.29
CSNK1D-206ENST00000577578 MYO16Q9Y6X6 1858 aa13.21□□□□□ -0.29
CSNK1D-206ENST00000577578 KIAA1549LQ6ZVL6 1849 aa13.21□□□□□ -0.29
CSNK1D-206ENST00000577578 ATG2BQ96BY7 2078 aa13.21□□□□□ -0.29
CSNK1D-206ENST00000577578 TRDMT1O14717 391 aaKnown RBP13.21□□□□□ -0.29
CSNK1D-206ENST00000577578 SLC16A3O15427 465 aaKnown RBP13.21□□□□□ -0.29
CSNK1D-206ENST00000577578 RTN3O95197 1032 aaPredicted RBP13.21□□□□□ -0.29
CSNK1D-206ENST00000577578 LMNAP02545 664 aaKnown RBP13.21□□□□□ -0.29
CSNK1D-206ENST00000577578 CCR3P51677 355 aa13.21□□□□□ -0.29
CSNK1D-206ENST00000577578 PMS1P54277 932 aaKnown RBP13.21□□□□□ -0.29
CSNK1D-206ENST00000577578 FKBP3Q00688 224 aaKnown RBP13.21□□□□□ -0.29
CSNK1D-206ENST00000577578 CSTF1Q05048 431 aaKnown RBP13.21□□□□□ -0.29
CSNK1D-206ENST00000577578 LRRC63Q05C16 580 aa13.21□□□□□ -0.29
CSNK1D-206ENST00000577578 TMEM196Q5HYL7 178 aa13.21□□□□□ -0.29
CSNK1D-206ENST00000577578 SNX30Q5VWJ9 437 aa13.21□□□□□ -0.29
CSNK1D-206ENST00000577578 TRIM68Q6AZZ1 485 aa13.21□□□□□ -0.29
CSNK1D-206ENST00000577578 CC2D1AQ6P1N0 951 aaPredicted RBP13.21□□□□□ -0.29
CSNK1D-206ENST00000577578 FOXR2Q6PJQ5 311 aa13.21□□□□□ -0.29
CSNK1D-206ENST00000577578 SPEM1Q8N4L4 309 aa13.21□□□□□ -0.29
CSNK1D-206ENST00000577578 PDZD8Q8NEN9 1154 aa13.21□□□□□ -0.29
CSNK1D-206ENST00000577578 ZMIZ2Q8NF64 920 aa13.21□□□□□ -0.29
CSNK1D-206ENST00000577578 TTC8Q8TAM2 541 aa13.21□□□□□ -0.29
CSNK1D-206ENST00000577578 SH3RF2Q8TEC5 729 aa13.21□□□□□ -0.29
CSNK1D-206ENST00000577578 EEF2KMTQ96G04 330 aa13.21□□□□□ -0.29
CSNK1D-206ENST00000577578 SLITRK1Q96PX8 696 aa13.21□□□□□ -0.29
CSNK1D-206ENST00000577578 TWNKQ96RR1 684 aa13.21□□□□□ -0.29
CSNK1D-206ENST00000577578 RNF38Q9H0F5 515 aa13.21□□□□□ -0.29
CSNK1D-206ENST00000577578 FAM124BQ9H5Z6 455 aaPredicted RBP13.21□□□□□ -0.29
CSNK1D-206ENST00000577578 KRT82Q9NSB4 513 aa13.21□□□□□ -0.29
CSNK1D-206ENST00000577578 COMMD8Q9NX08 183 aa13.21□□□□□ -0.29
CSNK1D-206ENST00000577578 ZSCAN32Q9NX65 697 aa13.21□□□□□ -0.29
CSNK1D-206ENST00000577578 STX10O60499 249 aa13.2□□□□□ -0.3
CSNK1D-206ENST00000577578 CILPO75339 1184 aa13.2□□□□□ -0.3
CSNK1D-206ENST00000577578 ZDHHC11BP0C7U3 371 aa13.2□□□□□ -0.3
CSNK1D-206ENST00000577578 EPB41P11171 864 aaKnown RBP13.2□□□□□ -0.3
CSNK1D-206ENST00000577578 CCDC130P13994 396 aa13.2□□□□□ -0.3
CSNK1D-206ENST00000577578 ARSAP15289 507 aa13.2□□□□□ -0.3
CSNK1D-206ENST00000577578 YWHAQP27348 245 aa13.2□□□□□ -0.3
CSNK1D-206ENST00000577578 MXI1P50539 228 aa13.2□□□□□ -0.3
CSNK1D-206ENST00000577578 TUBP50607 506 aa13.2□□□□□ -0.3
CSNK1D-206ENST00000577578 AMPD2Q01433 879 aa13.2□□□□□ -0.3
CSNK1D-206ENST00000577578 PON2Q15165 354 aa13.2□□□□□ -0.3
CSNK1D-206ENST00000577578 EML3Q32P44 896 aa13.2□□□□□ -0.3
CSNK1D-206ENST00000577578 ANKRD40Q6AI12 368 aa13.2□□□□□ -0.3
CSNK1D-206ENST00000577578 C12orf29Q8N999 325 aa13.2□□□□□ -0.3
CSNK1D-206ENST00000577578 SUMF1Q8NBK3 374 aa13.2□□□□□ -0.3
CSNK1D-206ENST00000577578 FBXL13Q8NEE6 735 aa13.2□□□□□ -0.3
CSNK1D-206ENST00000577578 SLC2A14Q8TDB8 520 aa13.2□□□□□ -0.3
CSNK1D-206ENST00000577578 WHAMMQ8TF30 809 aa13.2□□□□□ -0.3
CSNK1D-206ENST00000577578 SEMA4DQ92854 862 aa13.2□□□□□ -0.3
CSNK1D-206ENST00000577578 ERCC4Q92889 916 aaPredicted RBP13.2□□□□□ -0.3
CSNK1D-206ENST00000577578 ATP2A3Q93084 1043 aa13.2□□□□□ -0.3
CSNK1D-206ENST00000577578 HNRNPABQ99729 332 aaKnown RBP13.2□□□□□ -0.3
CSNK1D-206ENST00000577578 SMOQ99835 787 aa13.2□□□□□ -0.3
CSNK1D-206ENST00000577578 NT5C1AQ9BXI3 368 aa13.2□□□□□ -0.3
CSNK1D-206ENST00000577578 ECT2Q9H8V3 914 aa13.2□□□□□ -0.3
CSNK1D-206ENST00000577578 RBM12Q9NTZ6 932 aaKnown RBP13.2□□□□□ -0.3
CSNK1D-206ENST00000577578 DUS2Q9NX74 493 aaKnown RBP13.2□□□□□ -0.3
CSNK1D-206ENST00000577578 COQ4Q9Y3A0 265 aa13.2□□□□□ -0.3
CSNK1D-206ENST00000577578 MYOFQ9NZM1 2061 aa13.19□□□□□ -0.3
CSNK1D-206ENST00000577578 KINO60870 393 aaKnown RBP13.19□□□□□ -0.3
CSNK1D-206ENST00000577578 AP1G2O75843 785 aa13.19□□□□□ -0.3
CSNK1D-206ENST00000577578 BEST1O76090 585 aa13.19□□□□□ -0.3
CSNK1D-206ENST00000577578 CLSTN1O94985 981 aa13.19□□□□□ -0.3
CSNK1D-206ENST00000577578 HOXA6P31267 233 aa13.19□□□□□ -0.3
CSNK1D-206ENST00000577578 GJA4P35212 333 aa13.19□□□□□ -0.3
CSNK1D-206ENST00000577578 PPP1R2P41236 205 aa13.19□□□□□ -0.3
CSNK1D-206ENST00000577578 CXCL12P48061 93 aa13.19□□□□□ -0.3
CSNK1D-206ENST00000577578 SLC5A3P53794 718 aa13.19□□□□□ -0.3
CSNK1D-206ENST00000577578 ORC1Q13415 861 aa13.19□□□□□ -0.3
CSNK1D-206ENST00000577578 PPP2R5DQ14738 602 aa13.19□□□□□ -0.3
CSNK1D-206ENST00000577578 FSTL4Q6MZW2 842 aa13.19□□□□□ -0.3
CSNK1D-206ENST00000577578 TSSK4Q6SA08 328 aa13.19□□□□□ -0.3
CSNK1D-206ENST00000577578 Q6ZS52 159 aa13.19□□□□□ -0.3
CSNK1D-206ENST00000577578 CPA6Q8N4T0 437 aa13.19□□□□□ -0.3
CSNK1D-206ENST00000577578 TTC39CQ8N584 583 aa13.19□□□□□ -0.3
CSNK1D-206ENST00000577578 CCDC150Q8NCX0 1101 aa13.19□□□□□ -0.3
CSNK1D-206ENST00000577578 SCAMP5Q8TAC9 235 aa13.19□□□□□ -0.3
CSNK1D-206ENST00000577578 DHTKD1Q96HY7 919 aaPredicted RBP13.19□□□□□ -0.3
CSNK1D-206ENST00000577578 TSG101Q99816 390 aa13.19□□□□□ -0.3
CSNK1D-206ENST00000577578 DUSP9Q99956 384 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms