RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 TEX101Q9BY14 249 aa3□□□□□ -1.93
COPS3-213ENST00000577210 STK33Q9BYT3 514 aa3□□□□□ -1.93
COPS3-213ENST00000577210 WDR11Q9BZH6 1224 aa3□□□□□ -1.93
COPS3-213ENST00000577210 SMOC2Q9H3U7 446 aa3□□□□□ -1.93
COPS3-213ENST00000577210 MMRN2Q9H8L6 949 aa3□□□□□ -1.93
COPS3-213ENST00000577210 TMEM8AQ9HCN3 771 aa3□□□□□ -1.93
COPS3-213ENST00000577210 ANKFY1Q9P2R3 1169 aa3□□□□□ -1.93
COPS3-213ENST00000577210 DNMT3BQ9UBC3 853 aaKnown RBP3□□□□□ -1.93
COPS3-213ENST00000577210 DKK4Q9UBT3 224 aa3□□□□□ -1.93
COPS3-213ENST00000577210 NKX1-2Q9UD57 310 aaPredicted RBP3□□□□□ -1.93
COPS3-213ENST00000577210 PACSIN3Q9UKS6 424 aa3□□□□□ -1.93
COPS3-213ENST00000577210 NFU1Q9UMS0 254 aa3□□□□□ -1.93
COPS3-213ENST00000577210 UNC119BA6NIH7 251 aa2.99□□□□□ -1.93
COPS3-213ENST00000577210 NPIPB8E9PQR5 432 aa2.99□□□□□ -1.93
COPS3-213ENST00000577210 PODXLO00592 558 aa2.99□□□□□ -1.93
COPS3-213ENST00000577210 CD3EAPO15446 510 aaKnown RBP2.99□□□□□ -1.93
COPS3-213ENST00000577210 SRGAP2O75044 1071 aa2.99□□□□□ -1.93
COPS3-213ENST00000577210 URI1O94763 535 aaPredicted RBP2.99□□□□□ -1.93
COPS3-213ENST00000577210 LDHAP00338 332 aaKnown RBP2.99□□□□□ -1.93
COPS3-213ENST00000577210 IL1R1P14778 569 aa2.99□□□□□ -1.93
COPS3-213ENST00000577210 ZFXP17010 805 aaPredicted RBP2.99□□□□□ -1.93
COPS3-213ENST00000577210 PPM1AP35813 382 aa2.99□□□□□ -1.93
COPS3-213ENST00000577210 GRIA3P42263 894 aa2.99□□□□□ -1.93
COPS3-213ENST00000577210 PGDP52209 483 aa2.99□□□□□ -1.93
COPS3-213ENST00000577210 ZNF134P52741 427 aa2.99□□□□□ -1.93
COPS3-213ENST00000577210 DGKQP52824 942 aa2.99□□□□□ -1.93
COPS3-213ENST00000577210 ATXN1P54253 815 aaKnown RBP2.99□□□□□ -1.93
COPS3-213ENST00000577210 TPTEP56180 551 aa2.99□□□□□ -1.93
COPS3-213ENST00000577210 NSUN2Q08J23 767 aaKnown RBP eCLIP2.99□□□□□ -1.93
COPS3-213ENST00000577210 CHAF1AQ13111 956 aaPredicted RBP2.99□□□□□ -1.93
COPS3-213ENST00000577210 STK3Q13188 491 aa2.99□□□□□ -1.93
COPS3-213ENST00000577210 TBCCQ15814 346 aa2.99□□□□□ -1.93
COPS3-213ENST00000577210 MAPKAPK3Q16644 382 aa2.99□□□□□ -1.93
COPS3-213ENST00000577210 FAM153CQ494X1 144 aa2.99□□□□□ -1.93
COPS3-213ENST00000577210 RFX8Q6ZV50 586 aa2.99□□□□□ -1.93
COPS3-213ENST00000577210 PARS2Q7L3T8 475 aaKnown RBP2.99□□□□□ -1.93
COPS3-213ENST00000577210 GATAD2AQ86YP4 633 aa2.99□□□□□ -1.93
COPS3-213ENST00000577210 LIX1LQ8IVB5 337 aa2.99□□□□□ -1.93
COPS3-213ENST00000577210 IZUMO1Q8IYV9 350 aa2.99□□□□□ -1.93
COPS3-213ENST00000577210 ABRAQ8N0Z2 381 aa2.99□□□□□ -1.93
COPS3-213ENST00000577210 ZNF527Q8NB42 609 aa2.99□□□□□ -1.93
COPS3-213ENST00000577210 MBD3L2Q8NHZ7 208 aaPredicted RBP2.99□□□□□ -1.93
COPS3-213ENST00000577210 MYCBPAPQ8TBZ2 947 aa2.99□□□□□ -1.93
COPS3-213ENST00000577210 ASB10Q8WXI3 467 aa2.99□□□□□ -1.93
COPS3-213ENST00000577210 LINC00476Q8WZB0 136 aa2.99□□□□□ -1.93
COPS3-213ENST00000577210 TBC1D5Q92609 795 aa2.99□□□□□ -1.93
COPS3-213ENST00000577210 LRIG1Q96JA1 1093 aa2.99□□□□□ -1.93
COPS3-213ENST00000577210 NUDT22Q9BRQ3 303 aa2.99□□□□□ -1.93
COPS3-213ENST00000577210 VN1R3Q9BXE9 311 aa2.99□□□□□ -1.93
COPS3-213ENST00000577210 WDR12Q9GZL7 423 aaKnown RBP2.99□□□□□ -1.93
COPS3-213ENST00000577210 CXorf36Q9H7Y0 433 aa2.99□□□□□ -1.93
COPS3-213ENST00000577210 CHST12Q9NRB3 414 aa2.99□□□□□ -1.93
COPS3-213ENST00000577210 SNX15Q9NRS6 342 aa2.99□□□□□ -1.93
COPS3-213ENST00000577210 TBC1D23Q9NUY8 699 aa2.99□□□□□ -1.93
COPS3-213ENST00000577210 TFCP2L1Q9NZI6 479 aa2.99□□□□□ -1.93
COPS3-213ENST00000577210 STEAP1Q9UHE8 339 aa2.99□□□□□ -1.93
COPS3-213ENST00000577210 SERTAD3Q9UJW9 196 aa2.99□□□□□ -1.93
COPS3-213ENST00000577210 MAN2B2Q9Y2E5 1009 aa2.99□□□□□ -1.93
COPS3-213ENST00000577210 A8MVJ9 347 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 TMEM233B4DJY2 109 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 F5H423 210 aaPredicted RBP2.98□□□□□ -1.93
COPS3-213ENST00000577210 F8W8V4 182 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 H7C4K7 107 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 IFRD1O00458 451 aaPredicted RBP2.98□□□□□ -1.93
COPS3-213ENST00000577210 KIAA0355O15063 1070 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 SUV39H1O43463 412 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 RAMP2O60895 175 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 MYCLP12524 364 aaPredicted RBP2.98□□□□□ -1.93
COPS3-213ENST00000577210 EGR1P18146 543 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 RBL1P28749 1068 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 LIPAP38571 399 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 HSPA7P48741 367 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 GATMP50440 423 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 INHBCP55103 352 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 TIAL1Q01085 375 aaKnown RBP eCLIP2.98□□□□□ -1.93
COPS3-213ENST00000577210 PMS2P11Q13670 270 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 BLMHQ13867 455 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 BOP1Q14137 746 aaKnown RBP2.98□□□□□ -1.93
COPS3-213ENST00000577210 SLC5A9Q2M3M2 681 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 SLC35G1Q2M3R5 365 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 TRIM71Q2Q1W2 868 aaKnown RBP2.98□□□□□ -1.93
COPS3-213ENST00000577210 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.98□□□□□ -1.93
COPS3-213ENST00000577210 HECTD2Q5U5R9 776 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 VPS53Q5VIR6 699 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 FNDC7Q5VTL7 733 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 FCRL6Q6DN72 434 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 LAIR1Q6GTX8 287 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 ZDHHC24Q6UX98 284 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 Q6YL49 198 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 MRGPRGQ86SM5 289 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 COL23A1Q86Y22 540 aaPredicted RBP2.98□□□□□ -1.93
COPS3-213ENST00000577210 SMC5Q8IY18 1101 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 NRSN1Q8IZ57 195 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.98□□□□□ -1.93
COPS3-213ENST00000577210 SIRT6Q8N6T7 355 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 DNAJB14Q8TBM8 379 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 ACTRT2Q8TDY3 377 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 WDR60Q8WVS4 1066 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 SOCS4Q8WXH5 440 aa2.98□□□□□ -1.93
COPS3-213ENST00000577210 ATG4AQ8WYN0 398 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms