RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 SECISBP2LQ93073 1101 aaKnown RBP8.37□□□□□ -1.07
CCDC40-215ENST00000576033 SMARCD1Q96GM5 515 aa8.37□□□□□ -1.07
CCDC40-215ENST00000576033 FUBP3Q96I24 572 aaKnown RBP eCLIP8.37□□□□□ -1.07
CCDC40-215ENST00000576033 TNIP3Q96KP6 325 aa8.37□□□□□ -1.07
CCDC40-215ENST00000576033 ZNF512Q96ME7 567 aaPredicted RBP8.37□□□□□ -1.07
CCDC40-215ENST00000576033 ZNF830Q96NB3 372 aaPredicted RBP8.37□□□□□ -1.07
CCDC40-215ENST00000576033 LRRC3BQ96PB8 259 aa8.37□□□□□ -1.07
CCDC40-215ENST00000576033 OXCT2Q9BYC2 517 aaPredicted RBP8.37□□□□□ -1.07
CCDC40-215ENST00000576033 TRPC7Q9HCX4 862 aa8.37□□□□□ -1.07
CCDC40-215ENST00000576033 ABCB6Q9NP58 842 aa8.37□□□□□ -1.07
CCDC40-215ENST00000576033 DMAP1Q9NPF5 467 aaPredicted RBP8.37□□□□□ -1.07
CCDC40-215ENST00000576033 RTN4Q9NQC3 1192 aaKnown RBP8.37□□□□□ -1.07
CCDC40-215ENST00000576033 OSER1Q9NX31 292 aa8.37□□□□□ -1.07
CCDC40-215ENST00000576033 GMIPQ9P107 970 aa8.37□□□□□ -1.07
CCDC40-215ENST00000576033 LIMD1Q9UGP4 676 aa8.37□□□□□ -1.07
CCDC40-215ENST00000576033 PYCARDQ9ULZ3 195 aa8.37□□□□□ -1.07
CCDC40-215ENST00000576033 CCL26Q9Y258 94 aa8.37□□□□□ -1.07
CCDC40-215ENST00000576033 NUMBLQ9Y6R0 609 aa8.37□□□□□ -1.07
CCDC40-215ENST00000576033 MYO15AQ9UKN7 3530 aa8.37□□□□□ -1.07
CCDC40-215ENST00000576033 GTPBP10A4D1E9 387 aaKnown RBP8.36□□□□□ -1.07
CCDC40-215ENST00000576033 FAM86C2PA6NEL3 165 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 F8VZ95 297 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 M0QYV0 167 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 FOXN3O00409 490 aaPredicted RBP8.36□□□□□ -1.07
CCDC40-215ENST00000576033 MDM4O15151 490 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 C1RP00736 705 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 F11P03951 625 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 POU2F2P09086 479 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 UCHL3P15374 230 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 NPR3P17342 541 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 FECHP22830 423 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 MSNP26038 577 aaKnown RBP8.36□□□□□ -1.07
CCDC40-215ENST00000576033 GNA15P30679 374 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 MAGEA11P43364 429 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 TUFMP49411 452 aaKnown RBP8.36□□□□□ -1.07
CCDC40-215ENST00000576033 ZXDBP98169 803 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 GOLGA8FQ08AF8 430 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 GOLGA8DPQ0D2H9 430 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 CETN1Q12798 172 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 TAF10Q12962 218 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 HTR4Q13639 388 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 ARID5BQ14865 1188 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 DRAP1Q14919 205 aaPredicted RBP8.36□□□□□ -1.07
CCDC40-215ENST00000576033 VEPH1Q14D04 833 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 AAK1Q2M2I8 961 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 PKDCCQ504Y2 493 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 SGO2Q562F6 1265 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 FAM78AQ5JUQ0 283 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 GPR158Q5T848 1215 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 TAF3Q5VWG9 929 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 ARHGAP17Q68EM7 881 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 TANGO2Q6ICL3 276 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 VSTM1Q6UX27 236 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 BHLHA9Q7RTU4 235 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 TMC6Q7Z403 805 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 DNAAF5Q86Y56 855 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 GJD3Q8N144 294 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 ELMOD1Q8N336 334 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 OLIG1Q8TAK6 271 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 SHC3Q92529 594 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 WBP2Q969T9 261 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 ASIC4Q96FT7 647 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 PIWIL1Q96J94 861 aaKnown RBP8.36□□□□□ -1.07
CCDC40-215ENST00000576033 C8orf48Q96LL4 319 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 PCMTD1Q96MG8 357 aaPredicted RBP8.36□□□□□ -1.07
CCDC40-215ENST00000576033 NECTIN4Q96NY8 510 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 HNRNPABQ99729 332 aaKnown RBP8.36□□□□□ -1.07
CCDC40-215ENST00000576033 ATXN3LQ9H3M9 355 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 SLITRK6Q9H5Y7 841 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 NUDT5Q9UKK9 219 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 CDH7Q9ULB5 785 aa8.36□□□□□ -1.07
CCDC40-215ENST00000576033 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.36□□□□□ -1.07
CCDC40-215ENST00000576033 TRIM66O15016 1216 aa8.35□□□□□ -1.07
CCDC40-215ENST00000576033 THAP12O43422 761 aa8.35□□□□□ -1.07
CCDC40-215ENST00000576033 GFPT2O94808 682 aa8.35□□□□□ -1.07
CCDC40-215ENST00000576033 USP17L7P0C7H9 530 aa8.35□□□□□ -1.07
CCDC40-215ENST00000576033 LAMP2P13473 410 aa8.35□□□□□ -1.07
CCDC40-215ENST00000576033 ANXA13P27216 316 aa8.35□□□□□ -1.07
CCDC40-215ENST00000576033 JAM2P57087 298 aa8.35□□□□□ -1.07
CCDC40-215ENST00000576033 RPL10AP62906 217 aaKnown RBP8.35□□□□□ -1.07
CCDC40-215ENST00000576033 ADIGQ0VDE8 80 aa8.35□□□□□ -1.07
CCDC40-215ENST00000576033 MAPRE1Q15691 268 aaKnown RBP8.35□□□□□ -1.07
CCDC40-215ENST00000576033 PUS10Q3MIT2 529 aaKnown RBP8.35□□□□□ -1.07
CCDC40-215ENST00000576033 C2CD6Q53TS8 623 aa8.35□□□□□ -1.07
CCDC40-215ENST00000576033 FKBP15Q5T1M5 1219 aa8.35□□□□□ -1.07
CCDC40-215ENST00000576033 SPECC1LQ69YQ0 1117 aa8.35□□□□□ -1.07
CCDC40-215ENST00000576033 PMF1Q6P1K2 205 aa8.35□□□□□ -1.07
CCDC40-215ENST00000576033 ELMSAN1Q6PJG2 1045 aa8.35□□□□□ -1.07
CCDC40-215ENST00000576033 DENND5BQ6ZUT9 1274 aa8.35□□□□□ -1.07
CCDC40-215ENST00000576033 HFE2Q6ZVN8 426 aa8.35□□□□□ -1.07
CCDC40-215ENST00000576033 NOP9Q86U38 636 aaKnown RBP8.35□□□□□ -1.07
CCDC40-215ENST00000576033 PIGZQ86VD9 579 aa8.35□□□□□ -1.07
CCDC40-215ENST00000576033 TMEM139Q8IV31 216 aa8.35□□□□□ -1.07
CCDC40-215ENST00000576033 DRC7Q8IY82 874 aa8.35□□□□□ -1.07
CCDC40-215ENST00000576033 MAB21L3Q8N8X9 362 aa8.35□□□□□ -1.07
CCDC40-215ENST00000576033 TTC8Q8TAM2 541 aa8.35□□□□□ -1.07
CCDC40-215ENST00000576033 ZSCAN18Q8TBC5 510 aaPredicted RBP8.35□□□□□ -1.07
CCDC40-215ENST00000576033 ZFYVE19Q96K21 471 aa8.35□□□□□ -1.07
CCDC40-215ENST00000576033 SPATA17Q96L03 361 aa8.35□□□□□ -1.07
CCDC40-215ENST00000576033 CYP2S1Q96SQ9 504 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms