RNA–Protein interactions for RNA: ENST00000574728.1

PRPF8-211, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-211ENST00000574728 PDCD2LQ9BRP1 358 aa5.44□□□□□ -1.54
PRPF8-211ENST00000574728 ALDH8A1Q9H2A2 487 aaPredicted RBP5.44□□□□□ -1.54
PRPF8-211ENST00000574728 PXMP2Q9NR77 195 aa5.44□□□□□ -1.54
PRPF8-211ENST00000574728 SAE1Q9UBE0 346 aaPredicted RBP5.44□□□□□ -1.54
PRPF8-211ENST00000574728 ZHX1Q9UKY1 873 aaPredicted RBP5.44□□□□□ -1.54
PRPF8-211ENST00000574728 MRPL11Q9Y3B7 192 aaKnown RBP5.44□□□□□ -1.54
PRPF8-211ENST00000574728 CTDP1Q9Y5B0 961 aaPredicted RBP5.44□□□□□ -1.54
PRPF8-211ENST00000574728 PCDHB6Q9Y5E3 794 aa5.44□□□□□ -1.54
PRPF8-211ENST00000574728 ADAMTS20P59510 1910 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 KLF18A0A0U1RQI7 1052 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 ERICH2A1L162 156 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 TRIM43BA6NCK2 446 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 GABRDO14764 452 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 ZBTB43O43298 467 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 CFBP00751 764 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 ASGR1P07306 291 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 PFKMP08237 780 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 HMGB1P09429 215 aaKnown RBP5.43□□□□□ -1.54
PRPF8-211ENST00000574728 CALM1P0DP23 149 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 CALM2P0DP24 149 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 CALM3P0DP25 149 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 CASTP20810 708 aaKnown RBP5.43□□□□□ -1.54
PRPF8-211ENST00000574728 KCNC1P48547 511 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 GPR15P49685 360 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 GNAQP50148 359 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 KCNQ1P51787 676 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 SLURP1P55000 103 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 BEX3Q00994 111 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 TNFAIP2Q03169 654 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 TLE2Q04725 743 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 ST3GAL1Q11201 340 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 EIF4HQ15056 248 aaKnown RBP5.43□□□□□ -1.54
PRPF8-211ENST00000574728 PGM5Q15124 567 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 NPY5RQ15761 445 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.43□□□□□ -1.54
PRPF8-211ENST00000574728 TRIM60Q495X7 471 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 RUFY3Q7L099 469 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 ANKRD33Q7Z3H0 272 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 TLK2Q86UE8 772 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 FAM124AQ86V42 546 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 ZNF761Q86XN6 746 aaPredicted RBP5.43□□□□□ -1.54
PRPF8-211ENST00000574728 NSUN6Q8TEA1 469 aaKnown RBP5.43□□□□□ -1.54
PRPF8-211ENST00000574728 PIBF1Q8WXW3 757 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 KAT2BQ92831 832 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 TRIM43Q96BQ3 446 aaPredicted RBP5.43□□□□□ -1.54
PRPF8-211ENST00000574728 AJUBAQ96IF1 538 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 DYDC2Q96IM9 177 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 RAX2Q96IS3 184 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 IWS1Q96ST2 819 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 RMDN3Q96TC7 470 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 HTATIP2Q9BUP3 242 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 UPF3BQ9BZI7 483 aaKnown RBP5.43□□□□□ -1.54
PRPF8-211ENST00000574728 SENP6Q9GZR1 1112 aaPredicted RBP5.43□□□□□ -1.54
PRPF8-211ENST00000574728 MAP3K20Q9NYL2 800 aaKnown RBP5.43□□□□□ -1.54
PRPF8-211ENST00000574728 ADD3Q9UEY8 706 aaKnown RBP5.43□□□□□ -1.54
PRPF8-211ENST00000574728 CDC42EP3Q9UKI2 254 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 Q9Y3F1 56 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 SPEF1Q9Y4P9 236 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 VCANP13611 3396 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 REV3LO60673 3130 aa5.43□□□□□ -1.54
PRPF8-211ENST00000574728 UNC80Q8N2C7 3258 aa5.42□□□□□ -1.54
PRPF8-211ENST00000574728 MROH6A6NGR9 719 aa5.42□□□□□ -1.54
PRPF8-211ENST00000574728 CCDC69A6NI79 296 aa5.42□□□□□ -1.54
PRPF8-211ENST00000574728 GCOM1H8Y6P7 765 aaPredicted RBP5.42□□□□□ -1.54
PRPF8-211ENST00000574728 KIAA0355O15063 1070 aa5.42□□□□□ -1.54
PRPF8-211ENST00000574728 NRP2O60462 931 aa5.42□□□□□ -1.54
PRPF8-211ENST00000574728 EIF3JO75822 258 aaKnown RBP5.42□□□□□ -1.54
PRPF8-211ENST00000574728 CTDNEP1O95476 244 aa5.42□□□□□ -1.54
PRPF8-211ENST00000574728 CD4P01730 458 aa5.42□□□□□ -1.54
PRPF8-211ENST00000574728 LPLP06858 475 aa5.42□□□□□ -1.54
PRPF8-211ENST00000574728 POLR2MP0CAP2 368 aa5.42□□□□□ -1.54
PRPF8-211ENST00000574728 MYBL2P10244 700 aa5.42□□□□□ -1.54
PRPF8-211ENST00000574728 MTHFD2P13995 350 aa5.42□□□□□ -1.54
PRPF8-211ENST00000574728 IFNAR1P17181 557 aa5.42□□□□□ -1.54
PRPF8-211ENST00000574728 XPAP23025 273 aaPredicted RBP5.42□□□□□ -1.54
PRPF8-211ENST00000574728 ICAM3P32942 547 aa5.42□□□□□ -1.54
PRPF8-211ENST00000574728 KIF5BP33176 963 aa5.42□□□□□ -1.54
PRPF8-211ENST00000574728 GPR3P46089 330 aa5.42□□□□□ -1.54
PRPF8-211ENST00000574728 EPHB4P54760 987 aa5.42□□□□□ -1.54
PRPF8-211ENST00000574728 PURAQ00577 322 aaKnown RBP5.42□□□□□ -1.54
PRPF8-211ENST00000574728 SPIDRQ14159 915 aa5.42□□□□□ -1.54
PRPF8-211ENST00000574728 UBE2SQ16763 222 aa5.42□□□□□ -1.54
PRPF8-211ENST00000574728 PFKFB3Q16875 520 aaPredicted RBP5.42□□□□□ -1.54
PRPF8-211ENST00000574728 LY6KQ17RY6 165 aa5.42□□□□□ -1.54
PRPF8-211ENST00000574728 INAVAQ3KP66 663 aa5.42□□□□□ -1.54
PRPF8-211ENST00000574728 PLEKHG6Q3KR16 790 aa5.42□□□□□ -1.54
PRPF8-211ENST00000574728 PITRM1Q5JRX3 1037 aa5.42□□□□□ -1.54
PRPF8-211ENST00000574728 PGM2L1Q6PCE3 622 aa5.42□□□□□ -1.54
PRPF8-211ENST00000574728 BLOC1S2Q6QNY1 142 aa5.42□□□□□ -1.54
PRPF8-211ENST00000574728 CXCL17Q6UXB2 119 aa5.42□□□□□ -1.54
PRPF8-211ENST00000574728 CBARPQ8N350 705 aaPredicted RBP5.42□□□□□ -1.54
PRPF8-211ENST00000574728 SAMD3Q8N6K7 520 aa5.42□□□□□ -1.54
PRPF8-211ENST00000574728 CTCFLQ8NI51 663 aaPredicted RBP5.42□□□□□ -1.54
PRPF8-211ENST00000574728 SCFD2Q8WU76 684 aa5.42□□□□□ -1.54
PRPF8-211ENST00000574728 RRP36Q96EU6 259 aaKnown RBP5.42□□□□□ -1.54
PRPF8-211ENST00000574728 INPP4AQ96PE3 977 aaPredicted RBP5.42□□□□□ -1.54
PRPF8-211ENST00000574728 WDR11Q9BZH6 1224 aa5.42□□□□□ -1.54
PRPF8-211ENST00000574728 KCTD10Q9H3F6 313 aa5.42□□□□□ -1.54
PRPF8-211ENST00000574728 LUC7LQ9NQ29 371 aaKnown RBP5.42□□□□□ -1.54
PRPF8-211ENST00000574728 CCM2LQ9NUG4 571 aaPredicted RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms