RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 ZXDBP98169 803 aa27.65■■■□□ 2.02
NPLOC4-215ENST00000574095 SATB1Q01826 763 aa27.65■■■□□ 2.02
NPLOC4-215ENST00000574095 CCINQ13939 588 aa27.65■■■□□ 2.02
NPLOC4-215ENST00000574095 UNC93AQ86WB7 457 aa27.65■■■□□ 2.02
NPLOC4-215ENST00000574095 C12orf29Q8N999 325 aa27.65■■■□□ 2.02
NPLOC4-215ENST00000574095 ZBTB44Q8NCP5 570 aa27.65■■■□□ 2.02
NPLOC4-215ENST00000574095 NELL1Q92832 810 aa27.65■■■□□ 2.02
NPLOC4-215ENST00000574095 SMARCD1Q96GM5 515 aa27.65■■■□□ 2.02
NPLOC4-215ENST00000574095 PCDHGA2Q9Y5H1 932 aa27.65■■■□□ 2.02
NPLOC4-215ENST00000574095 PTPRZ1P23471 2315 aaPredicted RBP27.65■■■□□ 2.02
NPLOC4-215ENST00000574095 AP1G2O75843 785 aa27.64■■■□□ 2.02
NPLOC4-215ENST00000574095 RTN3O95197 1032 aaPredicted RBP27.64■■■□□ 2.02
NPLOC4-215ENST00000574095 EPB41P11171 864 aaKnown RBP27.64■■■□□ 2.02
NPLOC4-215ENST00000574095 CXCL12P48061 93 aa27.64■■■□□ 2.02
NPLOC4-215ENST00000574095 SPEM1Q8N4L4 309 aa27.64■■■□□ 2.02
NPLOC4-215ENST00000574095 SCAMP5Q8TAC9 235 aa27.64■■■□□ 2.02
NPLOC4-215ENST00000574095 SPATA20Q8TB22 786 aa27.64■■■□□ 2.02
NPLOC4-215ENST00000574095 SLC2A14Q8TDB8 520 aa27.64■■■□□ 2.02
NPLOC4-215ENST00000574095 TWNKQ96RR1 684 aa27.64■■■□□ 2.02
NPLOC4-215ENST00000574095 LINC00597Q9H2U6 94 aa27.64■■■□□ 2.02
NPLOC4-215ENST00000574095 DMAP1Q9NPF5 467 aaPredicted RBP27.64■■■□□ 2.02
NPLOC4-215ENST00000574095 KRT82Q9NSB4 513 aa27.64■■■□□ 2.02
NPLOC4-215ENST00000574095 FAM49BQ9NUQ9 324 aa27.64■■■□□ 2.02
NPLOC4-215ENST00000574095 FAM186AA6NE01 2351 aa27.63■■■□□ 2.01
NPLOC4-215ENST00000574095 TNFRSF10BO14763 440 aa27.63■■■□□ 2.01
NPLOC4-215ENST00000574095 BEST1O76090 585 aa27.63■■■□□ 2.01
NPLOC4-215ENST00000574095 TDGF1P13385 188 aa27.63■■■□□ 2.01
NPLOC4-215ENST00000574095 PFKLP17858 780 aa27.63■■■□□ 2.01
NPLOC4-215ENST00000574095 MCCD1P59942 119 aaPredicted RBP27.63■■■□□ 2.01
NPLOC4-215ENST00000574095 PPP2R5DQ14738 602 aa27.63■■■□□ 2.01
NPLOC4-215ENST00000574095 COBLL1Q53SF7 1204 aa27.63■■■□□ 2.01
NPLOC4-215ENST00000574095 KRT39Q6A163 491 aa27.63■■■□□ 2.01
NPLOC4-215ENST00000574095 ANKRD40Q6AI12 368 aa27.63■■■□□ 2.01
NPLOC4-215ENST00000574095 ISM2Q6H9L7 571 aa27.63■■■□□ 2.01
NPLOC4-215ENST00000574095 CPA6Q8N4T0 437 aa27.63■■■□□ 2.01
NPLOC4-215ENST00000574095 FBXO32Q969P5 355 aa27.63■■■□□ 2.01
NPLOC4-215ENST00000574095 TSG101Q99816 390 aa27.63■■■□□ 2.01
NPLOC4-215ENST00000574095 SMOQ99835 787 aa27.63■■■□□ 2.01
NPLOC4-215ENST00000574095 ECT2Q9H8V3 914 aa27.63■■■□□ 2.01
NPLOC4-215ENST00000574095 CHORDC1Q9UHD1 332 aaPredicted RBP27.63■■■□□ 2.01
NPLOC4-215ENST00000574095 HOOK1Q9UJC3 728 aaKnown RBP27.63■■■□□ 2.01
NPLOC4-215ENST00000574095 LEFTY2O00292 366 aa27.62■■■□□ 2.01
NPLOC4-215ENST00000574095 TCF3P15923 654 aa27.62■■■□□ 2.01
NPLOC4-215ENST00000574095 CD58P19256 250 aa27.62■■■□□ 2.01
NPLOC4-215ENST00000574095 GTF2H1P32780 548 aa27.62■■■□□ 2.01
NPLOC4-215ENST00000574095 GJA4P35212 333 aa27.62■■■□□ 2.01
NPLOC4-215ENST00000574095 SLC5A3P53794 718 aa27.62■■■□□ 2.01
NPLOC4-215ENST00000574095 PMS1P54277 932 aaKnown RBP27.62■■■□□ 2.01
NPLOC4-215ENST00000574095 SLC7A9P82251 487 aa27.62■■■□□ 2.01
NPLOC4-215ENST00000574095 EML3Q32P44 896 aa27.62■■■□□ 2.01
NPLOC4-215ENST00000574095 FSTL4Q6MZW2 842 aa27.62■■■□□ 2.01
NPLOC4-215ENST00000574095 SUMF1Q8NBK3 374 aa27.62■■■□□ 2.01
NPLOC4-215ENST00000574095 CCDC150Q8NCX0 1101 aa27.62■■■□□ 2.01
NPLOC4-215ENST00000574095 ZMIZ2Q8NF64 920 aa27.62■■■□□ 2.01
NPLOC4-215ENST00000574095 SEMA4DQ92854 862 aa27.62■■■□□ 2.01
NPLOC4-215ENST00000574095 NIF3L1Q9GZT8 377 aa27.62■■■□□ 2.01
NPLOC4-215ENST00000574095 CYP3A43Q9HB55 503 aa27.62■■■□□ 2.01
NPLOC4-215ENST00000574095 C2orf42Q9NWW7 574 aa27.62■■■□□ 2.01
NPLOC4-215ENST00000574095 ATG2BQ96BY7 2078 aa27.61■■■□□ 2.01
NPLOC4-215ENST00000574095 TRIM49BA6NDI0 452 aa27.61■■■□□ 2.01
NPLOC4-215ENST00000574095 TRDMT1O14717 391 aaKnown RBP27.61■■■□□ 2.01
NPLOC4-215ENST00000574095 LILRB5O75023 590 aa27.61■■■□□ 2.01
NPLOC4-215ENST00000574095 OLFM2O95897 454 aa27.61■■■□□ 2.01
NPLOC4-215ENST00000574095 OAS1P00973 400 aaKnown RBP27.61■■■□□ 2.01
NPLOC4-215ENST00000574095 GALK1P51570 392 aa27.61■■■□□ 2.01
NPLOC4-215ENST00000574095 MAP3K7CLP57077 242 aa27.61■■■□□ 2.01
NPLOC4-215ENST00000574095 AMPD2Q01433 879 aa27.61■■■□□ 2.01
NPLOC4-215ENST00000574095 INCA1Q0VD86 236 aa27.61■■■□□ 2.01
NPLOC4-215ENST00000574095 TMEM196Q5HYL7 178 aa27.61■■■□□ 2.01
NPLOC4-215ENST00000574095 NAIF1Q69YI7 327 aaPredicted RBP27.61■■■□□ 2.01
NPLOC4-215ENST00000574095 FAM126AQ9BYI3 521 aaPredicted RBP27.61■■■□□ 2.01
NPLOC4-215ENST00000574095 FBRSL1Q9HCM7 1045 aaKnown RBP27.61■■■□□ 2.01
NPLOC4-215ENST00000574095 SMPD4Q9NXE4 827 aa27.61■■■□□ 2.01
NPLOC4-215ENST00000574095 CPQQ9Y646 472 aa27.61■■■□□ 2.01
NPLOC4-215ENST00000574095 ADORA2BP29275 332 aa27.6■■■□□ 2.01
NPLOC4-215ENST00000574095 MXI1P50539 228 aa27.6■■■□□ 2.01
NPLOC4-215ENST00000574095 GRSF1Q12849 480 aaKnown RBP eCLIP27.6■■■□□ 2.01
NPLOC4-215ENST00000574095 SYNPOQ8N3V7 929 aa27.6■■■□□ 2.01
NPLOC4-215ENST00000574095 PDZD8Q8NEN9 1154 aa27.6■■■□□ 2.01
NPLOC4-215ENST00000574095 WHAMMQ8TF30 809 aa27.6■■■□□ 2.01
NPLOC4-215ENST00000574095 OVCA2Q8WZ82 227 aa27.6■■■□□ 2.01
NPLOC4-215ENST00000574095 ATP2A3Q93084 1043 aa27.6■■■□□ 2.01
NPLOC4-215ENST00000574095 NT5C1AQ9BXI3 368 aa27.6■■■□□ 2.01
NPLOC4-215ENST00000574095 IL37Q9NZH6 218 aa27.6■■■□□ 2.01
NPLOC4-215ENST00000574095 WDR87Q6ZQQ6 2873 aa27.6■■■□□ 2.01
NPLOC4-215ENST00000574095 GADD45BO75293 160 aaPredicted RBP27.59■■■□□ 2.01
NPLOC4-215ENST00000574095 MBL2P11226 248 aaPredicted RBP27.59■■■□□ 2.01
NPLOC4-215ENST00000574095 NRLP54845 237 aa27.59■■■□□ 2.01
NPLOC4-215ENST00000574095 FKBP3Q00688 224 aaKnown RBP27.59■■■□□ 2.01
NPLOC4-215ENST00000574095 TCERG1LQ5VWI1 586 aa27.59■■■□□ 2.01
NPLOC4-215ENST00000574095 FBXL13Q8NEE6 735 aa27.59■■■□□ 2.01
NPLOC4-215ENST00000574095 CYFIP2Q96F07 1278 aa27.59■■■□□ 2.01
NPLOC4-215ENST00000574095 CSNK1G1Q9HCP0 422 aa27.59■■■□□ 2.01
NPLOC4-215ENST00000574095 RAB20Q9NX57 234 aa27.59■■■□□ 2.01
NPLOC4-215ENST00000574095 MAN1B1Q9UKM7 699 aa27.59■■■□□ 2.01
NPLOC4-215ENST00000574095 STX10O60499 249 aa27.58■■■□□ 2.01
NPLOC4-215ENST00000574095 CILPO75339 1184 aa27.58■■■□□ 2.01
NPLOC4-215ENST00000574095 EGFP01133 1207 aa27.58■■■□□ 2.01
NPLOC4-215ENST00000574095 TRIM21P19474 475 aaKnown RBP27.58■■■□□ 2.01
NPLOC4-215ENST00000574095 HOXC13P31276 330 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms