RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 P4HA1P13674 534 aa10.62□□□□□ -0.71
RPA1-206ENST00000573994 CCDC130P13994 396 aa10.62□□□□□ -0.71
RPA1-206ENST00000573994 ARSAP15289 507 aa10.62□□□□□ -0.71
RPA1-206ENST00000573994 CTHP32929 405 aa10.62□□□□□ -0.71
RPA1-206ENST00000573994 ASPAP45381 313 aa10.62□□□□□ -0.71
RPA1-206ENST00000573994 NDST1P52848 882 aa10.62□□□□□ -0.71
RPA1-206ENST00000573994 NOP14P78316 857 aaKnown RBP10.62□□□□□ -0.71
RPA1-206ENST00000573994 ADAM9Q13443 819 aa10.62□□□□□ -0.71
RPA1-206ENST00000573994 FZD5Q13467 585 aa10.62□□□□□ -0.71
RPA1-206ENST00000573994 PON2Q15165 354 aa10.62□□□□□ -0.71
RPA1-206ENST00000573994 NFIL3Q16649 462 aa10.62□□□□□ -0.71
RPA1-206ENST00000573994 WDR44Q5JSH3 913 aa10.62□□□□□ -0.71
RPA1-206ENST00000573994 C1orf228Q6PIY5 440 aa10.62□□□□□ -0.71
RPA1-206ENST00000573994 Q6ZS52 159 aa10.62□□□□□ -0.71
RPA1-206ENST00000573994 INTS8Q75QN2 995 aaKnown RBP10.62□□□□□ -0.71
RPA1-206ENST00000573994 ACOT1Q86TX2 421 aa10.62□□□□□ -0.71
RPA1-206ENST00000573994 ARL14EPQ8N8R7 260 aaPredicted RBP10.62□□□□□ -0.71
RPA1-206ENST00000573994 ENGASEQ8NFI3 743 aa10.62□□□□□ -0.71
RPA1-206ENST00000573994 MSANTD3Q96H12 275 aa10.62□□□□□ -0.71
RPA1-206ENST00000573994 SPATA17Q96L03 361 aa10.62□□□□□ -0.71
RPA1-206ENST00000573994 GTPBP4Q9BZE4 634 aaKnown RBP10.62□□□□□ -0.71
RPA1-206ENST00000573994 CHRDQ9H2X0 955 aa10.62□□□□□ -0.71
RPA1-206ENST00000573994 EBF3Q9H4W6 596 aa10.62□□□□□ -0.71
RPA1-206ENST00000573994 LMAN1LQ9HAT1 526 aa10.62□□□□□ -0.71
RPA1-206ENST00000573994 HPS4Q9NQG7 708 aa10.62□□□□□ -0.71
RPA1-206ENST00000573994 KRT82Q9NSB4 513 aa10.62□□□□□ -0.71
RPA1-206ENST00000573994 FAM49BQ9NUQ9 324 aa10.62□□□□□ -0.71
RPA1-206ENST00000573994 RMND1Q9NWS8 449 aa10.62□□□□□ -0.71
RPA1-206ENST00000573994 THG1LQ9NWX6 298 aaKnown RBP10.62□□□□□ -0.71
RPA1-206ENST00000573994 GPR179Q6PRD1 2367 aa10.62□□□□□ -0.71
RPA1-206ENST00000573994 TICRRQ7Z2Z1 1910 aa10.62□□□□□ -0.71
RPA1-206ENST00000573994 RIF1Q5UIP0 2472 aaKnown RBP10.61□□□□□ -0.71
RPA1-206ENST00000573994 OTOL1A6NHN0 477 aaPredicted RBP10.61□□□□□ -0.71
RPA1-206ENST00000573994 SCAMP3O14828 347 aaKnown RBP10.61□□□□□ -0.71
RPA1-206ENST00000573994 MAPK13O15264 365 aa10.61□□□□□ -0.71
RPA1-206ENST00000573994 SMC2O95347 1197 aa10.61□□□□□ -0.71
RPA1-206ENST00000573994 ABL1P00519 1130 aa10.61□□□□□ -0.71
RPA1-206ENST00000573994 USP17L7P0C7H9 530 aa10.61□□□□□ -0.71
RPA1-206ENST00000573994 EPB41P11171 864 aaKnown RBP10.61□□□□□ -0.71
RPA1-206ENST00000573994 CD58P19256 250 aa10.61□□□□□ -0.71
RPA1-206ENST00000573994 RPL13P26373 211 aaKnown RBP10.61□□□□□ -0.71
RPA1-206ENST00000573994 PSMC2P35998 433 aaKnown RBP10.61□□□□□ -0.71
RPA1-206ENST00000573994 PRCPP42785 496 aa10.61□□□□□ -0.71
RPA1-206ENST00000573994 RPS9P46781 194 aaKnown RBP10.61□□□□□ -0.71
RPA1-206ENST00000573994 PMS1P54277 932 aaKnown RBP10.61□□□□□ -0.71
RPA1-206ENST00000573994 ENPEPQ07075 957 aa10.61□□□□□ -0.71
RPA1-206ENST00000573994 USP4Q13107 963 aa10.61□□□□□ -0.71
RPA1-206ENST00000573994 MTF1Q14872 753 aa10.61□□□□□ -0.71
RPA1-206ENST00000573994 LAPTM4AQ15012 233 aa10.61□□□□□ -0.71
RPA1-206ENST00000573994 ZNF77Q15935 545 aa10.61□□□□□ -0.71
RPA1-206ENST00000573994 SGSM1Q2NKQ1 1148 aa10.61□□□□□ -0.71
RPA1-206ENST00000573994 ITPRIPL2Q3MIP1 535 aa10.61□□□□□ -0.71
RPA1-206ENST00000573994 NAIF1Q69YI7 327 aaPredicted RBP10.61□□□□□ -0.71
RPA1-206ENST00000573994 ISM2Q6H9L7 571 aa10.61□□□□□ -0.71
RPA1-206ENST00000573994 CC2D1AQ6P1N0 951 aaPredicted RBP10.61□□□□□ -0.71
RPA1-206ENST00000573994 SMARCE1Q969G3 411 aa10.61□□□□□ -0.71
RPA1-206ENST00000573994 C8orf48Q96LL4 319 aa10.61□□□□□ -0.71
RPA1-206ENST00000573994 TWNKQ96RR1 684 aa10.61□□□□□ -0.71
RPA1-206ENST00000573994 IMPG2Q9BZV3 1241 aa10.61□□□□□ -0.71
RPA1-206ENST00000573994 C8orf33Q9H7E9 229 aaPredicted RBP10.61□□□□□ -0.71
RPA1-206ENST00000573994 KIF9Q9HAQ2 790 aa10.61□□□□□ -0.71
RPA1-206ENST00000573994 PRMT8Q9NR22 394 aaPredicted RBP10.61□□□□□ -0.71
RPA1-206ENST00000573994 GKN1Q9NS71 199 aa10.61□□□□□ -0.71
RPA1-206ENST00000573994 EHD2Q9NZN4 543 aa10.61□□□□□ -0.71
RPA1-206ENST00000573994 TRPM5Q9NZQ8 1165 aa10.61□□□□□ -0.71
RPA1-206ENST00000573994 GCNT4Q9P109 453 aa10.61□□□□□ -0.71
RPA1-206ENST00000573994 PCDHA5Q9Y5H7 936 aa10.61□□□□□ -0.71
RPA1-206ENST00000573994 ADGRG1Q9Y653 693 aa10.61□□□□□ -0.71
RPA1-206ENST00000573994 WNT6Q9Y6F9 365 aa10.61□□□□□ -0.71
RPA1-206ENST00000573994 NUP210Q8TEM1 1887 aaPredicted RBP10.61□□□□□ -0.71
RPA1-206ENST00000573994 FRYLO94915 3013 aa10.6□□□□□ -0.71
RPA1-206ENST00000573994 ATP8B3O60423 1300 aa10.6□□□□□ -0.71
RPA1-206ENST00000573994 TRIM49BA6NDI0 452 aa10.6□□□□□ -0.71
RPA1-206ENST00000573994 IKBKBO14920 756 aa10.6□□□□□ -0.71
RPA1-206ENST00000573994 GADD45BO75293 160 aaPredicted RBP10.6□□□□□ -0.71
RPA1-206ENST00000573994 AP1G2O75843 785 aa10.6□□□□□ -0.71
RPA1-206ENST00000573994 CHRNB1P11230 501 aa10.6□□□□□ -0.71
RPA1-206ENST00000573994 ADORA2BP29275 332 aa10.6□□□□□ -0.71
RPA1-206ENST00000573994 MXI1P50539 228 aa10.6□□□□□ -0.71
RPA1-206ENST00000573994 SLC5A3P53794 718 aa10.6□□□□□ -0.71
RPA1-206ENST00000573994 TAF10Q12962 218 aa10.6□□□□□ -0.71
RPA1-206ENST00000573994 GAS6Q14393 721 aa10.6□□□□□ -0.71
RPA1-206ENST00000573994 ZNF268Q14587 947 aaPredicted RBP10.6□□□□□ -0.71
RPA1-206ENST00000573994 EDRF1Q3B7T1 1238 aa10.6□□□□□ -0.71
RPA1-206ENST00000573994 DCAF17Q5H9S7 520 aaPredicted RBP10.6□□□□□ -0.71
RPA1-206ENST00000573994 ZNF658Q5TYW1 1059 aaPredicted RBP10.6□□□□□ -0.71
RPA1-206ENST00000573994 ZC3H14Q6PJT7 736 aaKnown RBP10.6□□□□□ -0.71
RPA1-206ENST00000573994 PAQR9Q6ZVX9 377 aa10.6□□□□□ -0.71
RPA1-206ENST00000573994 RALGPS2Q86X27 583 aaPredicted RBP10.6□□□□□ -0.71
RPA1-206ENST00000573994 FUKQ8N0W3 1084 aa10.6□□□□□ -0.71
RPA1-206ENST00000573994 C12orf29Q8N999 325 aa10.6□□□□□ -0.71
RPA1-206ENST00000573994 SCAMP5Q8TAC9 235 aa10.6□□□□□ -0.71
RPA1-206ENST00000573994 SLC2A14Q8TDB8 520 aa10.6□□□□□ -0.71
RPA1-206ENST00000573994 SH3RF2Q8TEC5 729 aa10.6□□□□□ -0.71
RPA1-206ENST00000573994 TAF4BQ92750 862 aa10.6□□□□□ -0.71
RPA1-206ENST00000573994 FBXO32Q969P5 355 aa10.6□□□□□ -0.71
RPA1-206ENST00000573994 JAKMIP2Q96AA8 810 aa10.6□□□□□ -0.71
RPA1-206ENST00000573994 TNIP3Q96KP6 325 aa10.6□□□□□ -0.71
RPA1-206ENST00000573994 KCNK16Q96T55 309 aa10.6□□□□□ -0.71
RPA1-206ENST00000573994 TSG101Q99816 390 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms