RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 TFIP11Q9UBB9 837 aaKnown RBP12.98□□□□□ -0.33
CCDC40-210ENST00000573903 CPQQ9Y646 472 aa12.98□□□□□ -0.33
CCDC40-210ENST00000573903 ZNF840PA6NDX5 716 aa12.97□□□□□ -0.33
CCDC40-210ENST00000573903 ALDH1A2O94788 518 aa12.97□□□□□ -0.33
CCDC40-210ENST00000573903 RTN3O95197 1032 aaPredicted RBP12.97□□□□□ -0.33
CCDC40-210ENST00000573903 CAVIN2O95810 425 aa12.97□□□□□ -0.33
CCDC40-210ENST00000573903 ADH1CP00326 375 aa12.97□□□□□ -0.33
CCDC40-210ENST00000573903 MBL2P11226 248 aaPredicted RBP12.97□□□□□ -0.33
CCDC40-210ENST00000573903 PTPN1P18031 435 aaKnown RBP12.97□□□□□ -0.33
CCDC40-210ENST00000573903 ATICP31939 592 aa12.97□□□□□ -0.33
CCDC40-210ENST00000573903 USP46P62068 366 aa12.97□□□□□ -0.33
CCDC40-210ENST00000573903 KRT85P78386 507 aa12.97□□□□□ -0.33
CCDC40-210ENST00000573903 TAF10Q12962 218 aa12.97□□□□□ -0.33
CCDC40-210ENST00000573903 BIRC3Q13489 604 aa12.97□□□□□ -0.33
CCDC40-210ENST00000573903 ST3GAL2Q16842 350 aa12.97□□□□□ -0.33
CCDC40-210ENST00000573903 C2orf27AQ580R0 203 aa12.97□□□□□ -0.33
CCDC40-210ENST00000573903 ANO7Q6IWH7 933 aa12.97□□□□□ -0.33
CCDC40-210ENST00000573903 CNNM4Q6P4Q7 775 aa12.97□□□□□ -0.33
CCDC40-210ENST00000573903 EPM2AIP1Q7L775 607 aaPredicted RBP12.97□□□□□ -0.33
CCDC40-210ENST00000573903 FILIP1Q7Z7B0 1213 aa12.97□□□□□ -0.33
CCDC40-210ENST00000573903 TTC30AQ86WT1 665 aa12.97□□□□□ -0.33
CCDC40-210ENST00000573903 B3GALNT2Q8NCR0 500 aa12.97□□□□□ -0.33
CCDC40-210ENST00000573903 USP33Q8TEY7 942 aa12.97□□□□□ -0.33
CCDC40-210ENST00000573903 EZH1Q92800 747 aaPredicted RBP12.97□□□□□ -0.33
CCDC40-210ENST00000573903 C7orf25Q9BPX7 421 aa12.97□□□□□ -0.33
CCDC40-210ENST00000573903 EDEM2Q9BV94 578 aa12.97□□□□□ -0.33
CCDC40-210ENST00000573903 TPSD1Q9BZJ3 242 aa12.97□□□□□ -0.33
CCDC40-210ENST00000573903 SMOC1Q9H4F8 434 aa12.97□□□□□ -0.33
CCDC40-210ENST00000573903 SMPD4Q9NXE4 827 aa12.97□□□□□ -0.33
CCDC40-210ENST00000573903 FAM13BQ9NYF5 915 aa12.97□□□□□ -0.33
CCDC40-210ENST00000573903 NXF1Q9UBU9 619 aaKnown RBP12.97□□□□□ -0.33
CCDC40-210ENST00000573903 ANGPTL2Q9UKU9 493 aa12.97□□□□□ -0.33
CCDC40-210ENST00000573903 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.96□□□□□ -0.33
CCDC40-210ENST00000573903 DCLK1O15075 740 aa12.96□□□□□ -0.33
CCDC40-210ENST00000573903 TGFB1I1O43294 461 aa12.96□□□□□ -0.33
CCDC40-210ENST00000573903 EXOC3O60645 756 aa12.96□□□□□ -0.33
CCDC40-210ENST00000573903 STAU1O95793 577 aaKnown RBP12.96□□□□□ -0.33
CCDC40-210ENST00000573903 OLFM2O95897 454 aa12.96□□□□□ -0.33
CCDC40-210ENST00000573903 CST3P01034 146 aaPredicted RBP12.96□□□□□ -0.33
CCDC40-210ENST00000573903 APODP05090 189 aa12.96□□□□□ -0.33
CCDC40-210ENST00000573903 CYP17A1P05093 508 aa12.96□□□□□ -0.33
CCDC40-210ENST00000573903 TRIM21P19474 475 aaKnown RBP12.96□□□□□ -0.33
CCDC40-210ENST00000573903 YWHAQP27348 245 aa12.96□□□□□ -0.33
CCDC40-210ENST00000573903 HOXD13P35453 343 aa12.96□□□□□ -0.33
CCDC40-210ENST00000573903 OPRD1P41143 372 aa12.96□□□□□ -0.33
CCDC40-210ENST00000573903 EIF2DP41214 584 aaKnown RBP12.96□□□□□ -0.33
CCDC40-210ENST00000573903 ME1P48163 572 aa12.96□□□□□ -0.33
CCDC40-210ENST00000573903 MRPS21P82921 87 aaKnown RBP12.96□□□□□ -0.33
CCDC40-210ENST00000573903 DNM1Q05193 864 aaKnown RBP12.96□□□□□ -0.33
CCDC40-210ENST00000573903 NUP93Q8N1F7 819 aa12.96□□□□□ -0.33
CCDC40-210ENST00000573903 GOLGA5Q8TBA6 731 aa12.96□□□□□ -0.33
CCDC40-210ENST00000573903 OVCA2Q8WZ82 227 aa12.96□□□□□ -0.33
CCDC40-210ENST00000573903 FBXO32Q969P5 355 aa12.96□□□□□ -0.33
CCDC40-210ENST00000573903 TNIP3Q96KP6 325 aa12.96□□□□□ -0.33
CCDC40-210ENST00000573903 SPACA7Q96KW9 195 aa12.96□□□□□ -0.33
CCDC40-210ENST00000573903 CNOT6LQ96LI5 555 aaKnown RBP12.96□□□□□ -0.33
CCDC40-210ENST00000573903 PNKPQ96T60 521 aa12.96□□□□□ -0.33
CCDC40-210ENST00000573903 MED10Q9BTT4 135 aa12.96□□□□□ -0.33
CCDC40-210ENST00000573903 ZNF518BQ9C0D4 1074 aa12.96□□□□□ -0.33
CCDC40-210ENST00000573903 CFAP97Q9P2B7 532 aa12.96□□□□□ -0.33
CCDC40-210ENST00000573903 TBC1D14Q9P2M4 693 aa12.96□□□□□ -0.33
CCDC40-210ENST00000573903 MMP17Q9ULZ9 603 aa12.96□□□□□ -0.33
CCDC40-210ENST00000573903 SDK1Q7Z5N4 2213 aa12.95□□□□□ -0.34
CCDC40-210ENST00000573903 BCLAF3A2AJT9 711 aaKnown RBP12.95□□□□□ -0.34
CCDC40-210ENST00000573903 K7EQS6 105 aa12.95□□□□□ -0.34
CCDC40-210ENST00000573903 POLR2DO15514 142 aaKnown RBP12.95□□□□□ -0.34
CCDC40-210ENST00000573903 OAS1P00973 400 aaKnown RBP12.95□□□□□ -0.34
CCDC40-210ENST00000573903 ADH5P11766 374 aa12.95□□□□□ -0.34
CCDC40-210ENST00000573903 ANP32AP39687 249 aaKnown RBP12.95□□□□□ -0.34
CCDC40-210ENST00000573903 AP3M2P53677 418 aa12.95□□□□□ -0.34
CCDC40-210ENST00000573903 MYL6P60660 151 aa12.95□□□□□ -0.34
CCDC40-210ENST00000573903 NUCB2P80303 420 aa12.95□□□□□ -0.34
CCDC40-210ENST00000573903 DHCR24Q15392 516 aa12.95□□□□□ -0.34
CCDC40-210ENST00000573903 ZNF699Q32M78 642 aa12.95□□□□□ -0.34
CCDC40-210ENST00000573903 HSF5Q4G112 596 aaPredicted RBP12.95□□□□□ -0.34
CCDC40-210ENST00000573903 PREPLQ4J6C6 727 aaPredicted RBP12.95□□□□□ -0.34
CCDC40-210ENST00000573903 ZNF667Q5HYK9 610 aa12.95□□□□□ -0.34
CCDC40-210ENST00000573903 DAB2IPQ5VWQ8 1189 aa12.95□□□□□ -0.34
CCDC40-210ENST00000573903 BTBD8Q5XKL5 378 aa12.95□□□□□ -0.34
CCDC40-210ENST00000573903 PMS2CLQ68D20 193 aa12.95□□□□□ -0.34
CCDC40-210ENST00000573903 SHC4Q6S5L8 630 aa12.95□□□□□ -0.34
CCDC40-210ENST00000573903 CYP2U1Q7Z449 544 aa12.95□□□□□ -0.34
CCDC40-210ENST00000573903 C12orf56Q8IXR9 622 aa12.95□□□□□ -0.34
CCDC40-210ENST00000573903 CEP57L1Q8IYX8 460 aa12.95□□□□□ -0.34
CCDC40-210ENST00000573903 CCDC33Q8N5R6 958 aa12.95□□□□□ -0.34
CCDC40-210ENST00000573903 SCFD1Q8WVM8 642 aa12.95□□□□□ -0.34
CCDC40-210ENST00000573903 NACA2Q9H009 215 aa12.95□□□□□ -0.34
CCDC40-210ENST00000573903 RNF38Q9H0F5 515 aa12.95□□□□□ -0.34
CCDC40-210ENST00000573903 BLZF1Q9H2G9 400 aa12.95□□□□□ -0.34
CCDC40-210ENST00000573903 DPEP3Q9H4B8 488 aa12.95□□□□□ -0.34
CCDC40-210ENST00000573903 POLMQ9NP87 494 aaPredicted RBP12.95□□□□□ -0.34
CCDC40-210ENST00000573903 RXFP3Q9NSD7 469 aa12.95□□□□□ -0.34
CCDC40-210ENST00000573903 BCCIPQ9P287 314 aaKnown RBP eCLIP12.95□□□□□ -0.34
CCDC40-210ENST00000573903 CIZ1Q9ULV3 898 aaPredicted RBP12.95□□□□□ -0.34
CCDC40-210ENST00000573903 SH3BP1Q9Y3L3 701 aa12.95□□□□□ -0.34
CCDC40-210ENST00000573903 SPTBN2O15020 2390 aa12.95□□□□□ -0.34
CCDC40-210ENST00000573903 NUP205Q92621 2012 aa12.95□□□□□ -0.34
CCDC40-210ENST00000573903 THADAQ6YHU6 1953 aa12.94□□□□□ -0.34
CCDC40-210ENST00000573903 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.94□□□□□ -0.34
CCDC40-210ENST00000573903 PVALEFA0A1B0GWK0 134 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms