RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 PRPF39Q86UA1 669 aaKnown RBP19.91■□□□□ 0.78
SCARF1-206ENST00000573852 ACO2Q99798 780 aaKnown RBP19.91■□□□□ 0.78
SCARF1-206ENST00000573852 NMRK1Q9NWW6 199 aa19.91■□□□□ 0.78
SCARF1-206ENST00000573852 TAS2R1Q9NYW7 299 aa19.91■□□□□ 0.78
SCARF1-206ENST00000573852 IKBKGQ9Y6K9 419 aa19.91■□□□□ 0.78
SCARF1-206ENST00000573852 PHIPQ8WWQ0 1821 aa19.91■□□□□ 0.78
SCARF1-206ENST00000573852 IGKV6D-21A0A0A0MT36 114 aa19.9■□□□□ 0.78
SCARF1-206ENST00000573852 E5RJQ4 531 aa19.9■□□□□ 0.78
SCARF1-206ENST00000573852 SMAPO00193 183 aa19.9■□□□□ 0.78
SCARF1-206ENST00000573852 FAM155BO75949 473 aa19.9■□□□□ 0.78
SCARF1-206ENST00000573852 INHBAP08476 426 aa19.9■□□□□ 0.78
SCARF1-206ENST00000573852 HOXC6P09630 235 aa19.9■□□□□ 0.78
SCARF1-206ENST00000573852 YWHAGP61981 247 aaKnown RBP eCLIP19.9■□□□□ 0.78
SCARF1-206ENST00000573852 TSNAXIP1Q2TAA8 658 aa19.9■□□□□ 0.78
SCARF1-206ENST00000573852 CDHR3Q6ZTQ4 885 aa19.9■□□□□ 0.78
SCARF1-206ENST00000573852 ZC3H18Q86VM9 953 aaKnown RBP19.9■□□□□ 0.78
SCARF1-206ENST00000573852 LMNTD2Q8IXW0 634 aa19.9■□□□□ 0.78
SCARF1-206ENST00000573852 TMEM130Q8N3G9 435 aa19.9■□□□□ 0.78
SCARF1-206ENST00000573852 NRG4Q8WWG1 115 aa19.9■□□□□ 0.78
SCARF1-206ENST00000573852 ZNF333Q96JL9 665 aa19.9■□□□□ 0.78
SCARF1-206ENST00000573852 MRPL4Q9BYD3 311 aaKnown RBP19.9■□□□□ 0.78
SCARF1-206ENST00000573852 LHX5Q9H2C1 402 aa19.9■□□□□ 0.78
SCARF1-206ENST00000573852 CPSF3Q9UKF6 684 aaKnown RBP19.9■□□□□ 0.78
SCARF1-206ENST00000573852 LCTP09848 1927 aa19.9■□□□□ 0.78
SCARF1-206ENST00000573852 OGTO15294 1046 aa19.9■□□□□ 0.78
SCARF1-206ENST00000573852 MYL2P10916 166 aa19.9■□□□□ 0.78
SCARF1-206ENST00000573852 RXRBP28702 533 aa19.9■□□□□ 0.78
SCARF1-206ENST00000573852 PEX19P40855 299 aa19.9■□□□□ 0.78
SCARF1-206ENST00000573852 RFC5P40937 340 aa19.9■□□□□ 0.78
SCARF1-206ENST00000573852 TUBP50607 506 aa19.9■□□□□ 0.78
SCARF1-206ENST00000573852 CDH8P55286 799 aa19.9■□□□□ 0.78
SCARF1-206ENST00000573852 MUM1Q2TAK8 710 aa19.9■□□□□ 0.78
SCARF1-206ENST00000573852 NBPF12Q5TAG4 269 aaPredicted RBP19.9■□□□□ 0.78
SCARF1-206ENST00000573852 WDR60Q8WVS4 1066 aa19.9■□□□□ 0.78
SCARF1-206ENST00000573852 STOML1Q9UBI4 398 aa19.9■□□□□ 0.78
SCARF1-206ENST00000573852 KAT6AQ92794 2004 aa19.9■□□□□ 0.78
SCARF1-206ENST00000573852 ABLIM1O14639 778 aa19.89■□□□□ 0.78
SCARF1-206ENST00000573852 NVLO15381 856 aaKnown RBP19.89■□□□□ 0.78
SCARF1-206ENST00000573852 TRUB2O95900 331 aaKnown RBP19.89■□□□□ 0.78
SCARF1-206ENST00000573852 SRGAP2CP0DJJ0 459 aa19.89■□□□□ 0.78
SCARF1-206ENST00000573852 SERPINB4P48594 390 aa19.89■□□□□ 0.78
SCARF1-206ENST00000573852 STXBP2Q15833 593 aa19.89■□□□□ 0.78
SCARF1-206ENST00000573852 DARS2Q6PI48 645 aaKnown RBP19.89■□□□□ 0.78
SCARF1-206ENST00000573852 TEX13BQ9BXU2 312 aa19.89■□□□□ 0.78
SCARF1-206ENST00000573852 YIPF3Q9GZM5 350 aa19.89■□□□□ 0.78
SCARF1-206ENST00000573852 FZD1Q9UP38 647 aa19.89■□□□□ 0.78
SCARF1-206ENST00000573852 FAM237BA0A1B0GVD1 139 aa19.89■□□□□ 0.77
SCARF1-206ENST00000573852 CNTN2Q02246 1040 aa19.89■□□□□ 0.77
SCARF1-206ENST00000573852 TNFAIP1Q13829 316 aa19.89■□□□□ 0.77
SCARF1-206ENST00000573852 KCNJ11Q14654 390 aa19.89■□□□□ 0.77
SCARF1-206ENST00000573852 CCDC6Q16204 474 aa19.89■□□□□ 0.77
SCARF1-206ENST00000573852 VPS52Q8N1B4 723 aa19.89■□□□□ 0.77
SCARF1-206ENST00000573852 ZNF280CQ8ND82 737 aa19.89■□□□□ 0.77
SCARF1-206ENST00000573852 ARMC2Q8NEN0 867 aa19.89■□□□□ 0.77
SCARF1-206ENST00000573852 OXNAD1Q96HP4 312 aaPredicted RBP19.89■□□□□ 0.77
SCARF1-206ENST00000573852 PEBP4Q96S96 227 aa19.89■□□□□ 0.77
SCARF1-206ENST00000573852 SYNCQ9H7C4 482 aa19.89■□□□□ 0.77
SCARF1-206ENST00000573852 ARMCX1Q9P291 453 aa19.89■□□□□ 0.77
SCARF1-206ENST00000573852 USP18Q9UMW8 372 aa19.89■□□□□ 0.77
SCARF1-206ENST00000573852 FCHO1O14526 889 aa19.89■□□□□ 0.77
SCARF1-206ENST00000573852 ESRRAP11474 423 aaPredicted RBP19.89■□□□□ 0.77
SCARF1-206ENST00000573852 ICAM3P32942 547 aa19.89■□□□□ 0.77
SCARF1-206ENST00000573852 VHLP40337 213 aa19.89■□□□□ 0.77
SCARF1-206ENST00000573852 OSTNP61366 133 aa19.89■□□□□ 0.77
SCARF1-206ENST00000573852 ROR1Q01973 937 aa19.89■□□□□ 0.77
SCARF1-206ENST00000573852 KRT72Q14CN4 511 aa19.89■□□□□ 0.77
SCARF1-206ENST00000573852 RAB6CQ53S08 254 aa19.89■□□□□ 0.77
SCARF1-206ENST00000573852 SNX30Q5VWJ9 437 aa19.89■□□□□ 0.77
SCARF1-206ENST00000573852 SCYL3Q8IZE3 742 aa19.89■□□□□ 0.77
SCARF1-206ENST00000573852 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.89■□□□□ 0.77
SCARF1-206ENST00000573852 MCUR1Q96AQ8 359 aa19.89■□□□□ 0.77
SCARF1-206ENST00000573852 RAB6CQ9H0N0 254 aa19.89■□□□□ 0.77
SCARF1-206ENST00000573852 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.89■□□□□ 0.77
SCARF1-206ENST00000573852 C1QAP02745 245 aa19.88■□□□□ 0.77
SCARF1-206ENST00000573852 SH3PXD2AQ5TCZ1 1133 aa19.88■□□□□ 0.77
SCARF1-206ENST00000573852 ALYREFQ86V81 257 aaKnown RBP19.88■□□□□ 0.77
SCARF1-206ENST00000573852 CFAP36Q96G28 342 aa19.88■□□□□ 0.77
SCARF1-206ENST00000573852 SRPK1Q96SB4 655 aaKnown RBP19.88■□□□□ 0.77
SCARF1-206ENST00000573852 SYT15Q9BQS2 421 aa19.88■□□□□ 0.77
SCARF1-206ENST00000573852 NMUR2Q9GZQ4 415 aa19.88■□□□□ 0.77
SCARF1-206ENST00000573852 NRBP2Q9NSY0 501 aa19.88■□□□□ 0.77
SCARF1-206ENST00000573852 MAFO75444 373 aaPredicted RBP19.88■□□□□ 0.77
SCARF1-206ENST00000573852 MRPS35P82673 323 aaKnown RBP19.88■□□□□ 0.77
SCARF1-206ENST00000573852 FAM136AQ96C01 138 aa19.88■□□□□ 0.77
SCARF1-206ENST00000573852 SDCBP2Q9H190 292 aa19.88■□□□□ 0.77
SCARF1-206ENST00000573852 ARHGEF4Q9NR80 690 aa19.88■□□□□ 0.77
SCARF1-206ENST00000573852 MGAMO43451 1857 aa19.87■□□□□ 0.77
SCARF1-206ENST00000573852 TRIM49D1C9J1S8 452 aa19.87■□□□□ 0.77
SCARF1-206ENST00000573852 PSMG1O95456 288 aa19.87■□□□□ 0.77
SCARF1-206ENST00000573852 RARBP10826 455 aa19.87■□□□□ 0.77
SCARF1-206ENST00000573852 PTPRAP18433 802 aa19.87■□□□□ 0.77
SCARF1-206ENST00000573852 EFNA5P52803 228 aa19.87■□□□□ 0.77
SCARF1-206ENST00000573852 NOMO1Q15155 1222 aa19.87■□□□□ 0.77
SCARF1-206ENST00000573852 HSF5Q4G112 596 aaPredicted RBP19.87■□□□□ 0.77
SCARF1-206ENST00000573852 CEP120Q8N960 986 aa19.87■□□□□ 0.77
SCARF1-206ENST00000573852 TWNKQ96RR1 684 aa19.87■□□□□ 0.77
SCARF1-206ENST00000573852 MECRQ9BV79 373 aa19.87■□□□□ 0.77
SCARF1-206ENST00000573852 CXorf49A8MYA2 514 aaPredicted RBP19.87■□□□□ 0.77
SCARF1-206ENST00000573852 COPEO14579 308 aa19.87■□□□□ 0.77
SCARF1-206ENST00000573852 CAPN9O14815 690 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms