RNA–Protein interactions for RNA: ENST00000573694.5

NDE1-208, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-208ENST00000573694 TUSC3Q13454 348 aa10.13□□□□□ -0.79
NDE1-208ENST00000573694 MESDQ14696 234 aa10.13□□□□□ -0.79
NDE1-208ENST00000573694 TCEAL1Q15170 157 aa10.13□□□□□ -0.79
NDE1-208ENST00000573694 RPS6KA1Q15418 735 aa10.13□□□□□ -0.79
NDE1-208ENST00000573694 KIAA0319Q5VV43 1072 aa10.13□□□□□ -0.79
NDE1-208ENST00000573694 C11orf63Q6NUN7 778 aa10.13□□□□□ -0.79
NDE1-208ENST00000573694 CREG2Q8IUH2 290 aa10.13□□□□□ -0.79
NDE1-208ENST00000573694 LRRC52Q8N7C0 313 aa10.13□□□□□ -0.79
NDE1-208ENST00000573694 ANKRD7Q92527 254 aa10.13□□□□□ -0.79
NDE1-208ENST00000573694 GOLGA1Q92805 767 aa10.13□□□□□ -0.79
NDE1-208ENST00000573694 DDX27Q96GQ7 796 aaKnown RBP10.13□□□□□ -0.79
NDE1-208ENST00000573694 FAXDC2Q96IV6 333 aa10.13□□□□□ -0.79
NDE1-208ENST00000573694 KLHL5Q96PQ7 755 aa10.13□□□□□ -0.79
NDE1-208ENST00000573694 GAD1Q99259 594 aa10.13□□□□□ -0.79
NDE1-208ENST00000573694 OXCT2Q9BYC2 517 aaPredicted RBP10.13□□□□□ -0.79
NDE1-208ENST00000573694 AVENQ9NQS1 362 aaPredicted RBP10.13□□□□□ -0.79
NDE1-208ENST00000573694 SLC38A7Q9NVC3 462 aa10.13□□□□□ -0.79
NDE1-208ENST00000573694 MIOSQ9NXC5 875 aa10.13□□□□□ -0.79
NDE1-208ENST00000573694 IGSF9Q9P2J2 1179 aa10.13□□□□□ -0.79
NDE1-208ENST00000573694 TJP2Q9UDY2 1190 aa10.13□□□□□ -0.79
NDE1-208ENST00000573694 PCDHGC3Q9UN70 934 aa10.13□□□□□ -0.79
NDE1-208ENST00000573694 SORCS3Q9UPU3 1222 aa10.13□□□□□ -0.79
NDE1-208ENST00000573694 SNX9Q9Y5X1 595 aa10.13□□□□□ -0.79
NDE1-208ENST00000573694 PTPRDP23468 1912 aa10.13□□□□□ -0.79
NDE1-208ENST00000573694 SF3B1O75533 1304 aaKnown RBP eCLIP10.12□□□□□ -0.797e-12■■■■■ 77.5
NDE1-208ENST00000573694 ATG2AQ2TAZ0 1938 aa10.12□□□□□ -0.79
NDE1-208ENST00000573694 CTAGE15A4D2H0 777 aa10.12□□□□□ -0.79
NDE1-208ENST00000573694 KCNK3O14649 394 aa10.12□□□□□ -0.79
NDE1-208ENST00000573694 DDX3YO15523 660 aaKnown RBP10.12□□□□□ -0.79
NDE1-208ENST00000573694 XPOTO43592 962 aaKnown RBP10.12□□□□□ -0.79
NDE1-208ENST00000573694 DDHD2O94830 711 aa10.12□□□□□ -0.79
NDE1-208ENST00000573694 MICAL2O94851 1124 aa10.12□□□□□ -0.79
NDE1-208ENST00000573694 LSM8O95777 96 aaKnown RBP10.12□□□□□ -0.79
NDE1-208ENST00000573694 THP07101 528 aa10.12□□□□□ -0.79
NDE1-208ENST00000573694 CTAGE8P0CG41 777 aa10.12□□□□□ -0.79
NDE1-208ENST00000573694 PRLRP16471 622 aa10.12□□□□□ -0.79
NDE1-208ENST00000573694 KLRC2P26717 231 aa10.12□□□□□ -0.79
NDE1-208ENST00000573694 CDH5P33151 784 aaPredicted RBP10.12□□□□□ -0.79
NDE1-208ENST00000573694 MARCKSL1P49006 195 aa10.12□□□□□ -0.79
NDE1-208ENST00000573694 SCNN1GP51170 649 aa10.12□□□□□ -0.79
NDE1-208ENST00000573694 CLCN4P51793 760 aa10.12□□□□□ -0.79
NDE1-208ENST00000573694 C1QBPQ07021 282 aaKnown RBP10.12□□□□□ -0.79
NDE1-208ENST00000573694 MTMR3Q13615 1198 aa10.12□□□□□ -0.79
NDE1-208ENST00000573694 PTPN20Q4JDL3 420 aa10.12□□□□□ -0.79
NDE1-208ENST00000573694 DCAF12L1Q5VU92 463 aa10.12□□□□□ -0.79
NDE1-208ENST00000573694 CTAGE6Q86UF2 777 aa10.12□□□□□ -0.79
NDE1-208ENST00000573694 OSTM1Q86WC4 334 aa10.12□□□□□ -0.79
NDE1-208ENST00000573694 ZNF280BQ86YH2 543 aa10.12□□□□□ -0.79
NDE1-208ENST00000573694 PHF13Q86YI8 300 aaPredicted RBP10.12□□□□□ -0.79
NDE1-208ENST00000573694 CTAGE4Q8IX94 777 aa10.12□□□□□ -0.79
NDE1-208ENST00000573694 SYCE1Q8N0S2 351 aa10.12□□□□□ -0.79
NDE1-208ENST00000573694 WDTC1Q8N5D0 677 aa10.12□□□□□ -0.79
NDE1-208ENST00000573694 GSTCDQ8NEC7 633 aa10.12□□□□□ -0.79
NDE1-208ENST00000573694 TRIM11Q96F44 468 aa10.12□□□□□ -0.79
NDE1-208ENST00000573694 TMEM176AQ96HP8 235 aa10.12□□□□□ -0.79
NDE1-208ENST00000573694 ZNF560Q96MR9 790 aa10.12□□□□□ -0.79
NDE1-208ENST00000573694 LPIN3Q9BQK8 851 aa10.12□□□□□ -0.79
NDE1-208ENST00000573694 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.12□□□□□ -0.79
NDE1-208ENST00000573694 ADAM22Q9P0K1 906 aa10.12□□□□□ -0.79
NDE1-208ENST00000573694 UVRAGQ9P2Y5 699 aa10.12□□□□□ -0.79
NDE1-208ENST00000573694 CYTH4Q9UIA0 394 aa10.12□□□□□ -0.79
NDE1-208ENST00000573694 ANAPC7Q9UJX3 599 aa10.12□□□□□ -0.79
NDE1-208ENST00000573694 ADAM28Q9UKQ2 775 aa10.12□□□□□ -0.79
NDE1-208ENST00000573694 AMFRQ9UKV5 643 aa10.12□□□□□ -0.79
NDE1-208ENST00000573694 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.12□□□□□ -0.79
NDE1-208ENST00000573694 INPP5FQ9Y2H2 1132 aa10.12□□□□□ -0.79
NDE1-208ENST00000573694 TRIOO75962 3097 aa10.11□□□□□ -0.79
NDE1-208ENST00000573694 TMEM221A6NGB7 291 aa10.11□□□□□ -0.79
NDE1-208ENST00000573694 M0QYV0 167 aa10.11□□□□□ -0.79
NDE1-208ENST00000573694 M0R296 226 aa10.11□□□□□ -0.79
NDE1-208ENST00000573694 O00370 1275 aa10.11□□□□□ -0.79
NDE1-208ENST00000573694 GLUD1P00367 558 aa10.11□□□□□ -0.79
NDE1-208ENST00000573694 CNPP09543 421 aaKnown RBP10.11□□□□□ -0.79
NDE1-208ENST00000573694 HNRNPA1P09651 372 aaKnown RBP eCLIP10.11□□□□□ -0.79
NDE1-208ENST00000573694 MYBL1P10243 752 aa10.11□□□□□ -0.79
NDE1-208ENST00000573694 COMTP21964 271 aa10.11□□□□□ -0.79
NDE1-208ENST00000573694 LRPAP1P30533 357 aa10.11□□□□□ -0.79
NDE1-208ENST00000573694 RPL9P32969 192 aaKnown RBP10.11□□□□□ -0.79
NDE1-208ENST00000573694 TAF6P49848 677 aa10.11□□□□□ -0.79
NDE1-208ENST00000573694 SOWAHAQ2M3V2 549 aa10.11□□□□□ -0.79
NDE1-208ENST00000573694 GOLGA7BQ2TAP0 167 aa10.11□□□□□ -0.79
NDE1-208ENST00000573694 SV2CQ496J9 727 aa10.11□□□□□ -0.79
NDE1-208ENST00000573694 CYP4A22Q5TCH4 519 aa10.11□□□□□ -0.79
NDE1-208ENST00000573694 LIN9Q5TKA1 542 aa10.11□□□□□ -0.79
NDE1-208ENST00000573694 DCLRE1AQ6PJP8 1040 aa10.11□□□□□ -0.79
NDE1-208ENST00000573694 DPH6Q7L8W6 267 aa10.11□□□□□ -0.79
NDE1-208ENST00000573694 ZNF572Q7Z3I7 529 aaPredicted RBP10.11□□□□□ -0.79
NDE1-208ENST00000573694 SUGP1Q8IWZ8 645 aaKnown RBP10.11□□□□□ -0.79
NDE1-208ENST00000573694 FBXL6Q8N531 539 aa10.11□□□□□ -0.79
NDE1-208ENST00000573694 TMEM35BQ8NCS4 154 aa10.11□□□□□ -0.79
NDE1-208ENST00000573694 KBTBD7Q8WVZ9 684 aa10.11□□□□□ -0.79
NDE1-208ENST00000573694 UBXN4Q92575 508 aa10.11□□□□□ -0.79
NDE1-208ENST00000573694 ALG3Q92685 438 aa10.11□□□□□ -0.79
NDE1-208ENST00000573694 RABGGTAQ92696 567 aa10.11□□□□□ -0.79
NDE1-208ENST00000573694 KRT35Q92764 455 aa10.11□□□□□ -0.79
NDE1-208ENST00000573694 KHSRPQ92945 711 aaKnown RBP eCLIP10.11□□□□□ -0.79
NDE1-208ENST00000573694 HES6Q96HZ4 224 aa10.11□□□□□ -0.79
NDE1-208ENST00000573694 DPEP3Q9H4B8 488 aa10.11□□□□□ -0.79
NDE1-208ENST00000573694 FAM49BQ9NUQ9 324 aa10.11□□□□□ -0.79
NDE1-208ENST00000573694 DNAJB4Q9UDY4 337 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms