RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 NDST1P52848 882 aa18.4■□□□□ 0.54
SMG6-212ENST00000573153 TAF10Q12962 218 aa18.4■□□□□ 0.54
SMG6-212ENST00000573153 ADAM9Q13443 819 aa18.4■□□□□ 0.54
SMG6-212ENST00000573153 EML3Q32P44 896 aa18.4■□□□□ 0.54
SMG6-212ENST00000573153 C1orf228Q6PIY5 440 aa18.4■□□□□ 0.54
SMG6-212ENST00000573153 ACOT1Q86TX2 421 aa18.4■□□□□ 0.54
SMG6-212ENST00000573153 ADSSL1Q8N142 457 aa18.4■□□□□ 0.54
SMG6-212ENST00000573153 SH3RF2Q8TEC5 729 aa18.4■□□□□ 0.54
SMG6-212ENST00000573153 ZFRQ96KR1 1074 aaKnown RBP18.4■□□□□ 0.54
SMG6-212ENST00000573153 HOOK1Q9UJC3 728 aaKnown RBP18.4■□□□□ 0.54
SMG6-212ENST00000573153 WNT6Q9Y6F9 365 aa18.4■□□□□ 0.54
SMG6-212ENST00000573153 MYO16Q9Y6X6 1858 aa18.39■□□□□ 0.54
SMG6-212ENST00000573153 TRAV19A0A0A6YYK7 116 aa18.39■□□□□ 0.53
SMG6-212ENST00000573153 HHLA1C9JL84 531 aa18.39■□□□□ 0.53
SMG6-212ENST00000573153 TRDMT1O14717 391 aaKnown RBP18.39■□□□□ 0.53
SMG6-212ENST00000573153 LMNAP02545 664 aaKnown RBP18.39■□□□□ 0.53
SMG6-212ENST00000573153 USP17L7P0C7H9 530 aa18.39■□□□□ 0.53
SMG6-212ENST00000573153 ZDHHC11BP0C7U3 371 aa18.39■□□□□ 0.53
SMG6-212ENST00000573153 PFKLP17858 780 aa18.39■□□□□ 0.53
SMG6-212ENST00000573153 BMP6P22004 513 aa18.39■□□□□ 0.53
SMG6-212ENST00000573153 SLC7A9P82251 487 aa18.39■□□□□ 0.53
SMG6-212ENST00000573153 DMWDQ09019 674 aa18.39■□□□□ 0.53
SMG6-212ENST00000573153 UNC93AQ86WB7 457 aa18.39■□□□□ 0.53
SMG6-212ENST00000573153 SPEM1Q8N4L4 309 aa18.39■□□□□ 0.53
SMG6-212ENST00000573153 C12orf29Q8N999 325 aa18.39■□□□□ 0.53
SMG6-212ENST00000573153 SCAMP5Q8TAC9 235 aa18.39■□□□□ 0.53
SMG6-212ENST00000573153 OSCP1Q8WVF1 389 aa18.39■□□□□ 0.53
SMG6-212ENST00000573153 TMEM8AQ9HCN3 771 aa18.39■□□□□ 0.53
SMG6-212ENST00000573153 ZSCAN32Q9NX65 697 aa18.39■□□□□ 0.53
SMG6-212ENST00000573153 PCDHGA2Q9Y5H1 932 aa18.39■□□□□ 0.53
SMG6-212ENST00000573153 WDR87Q6ZQQ6 2873 aa18.38■□□□□ 0.53
SMG6-212ENST00000573153 EP300Q09472 2414 aaPredicted RBP18.38■□□□□ 0.53
SMG6-212ENST00000573153 TRIM49BA6NDI0 452 aa18.38■□□□□ 0.53
SMG6-212ENST00000573153 CILPO75339 1184 aa18.38■□□□□ 0.53
SMG6-212ENST00000573153 CKMP06732 381 aa18.38■□□□□ 0.53
SMG6-212ENST00000573153 P4HA1P13674 534 aa18.38■□□□□ 0.53
SMG6-212ENST00000573153 CD44P16070 742 aaKnown RBP18.38■□□□□ 0.53
SMG6-212ENST00000573153 GTF2H1P32780 548 aa18.38■□□□□ 0.53
SMG6-212ENST00000573153 GJA4P35212 333 aa18.38■□□□□ 0.53
SMG6-212ENST00000573153 PIK3CAP42336 1068 aa18.38■□□□□ 0.53
SMG6-212ENST00000573153 SLC5A3P53794 718 aa18.38■□□□□ 0.53
SMG6-212ENST00000573153 SNX30Q5VWJ9 437 aa18.38■□□□□ 0.53
SMG6-212ENST00000573153 GPRIN1Q7Z2K8 1008 aa18.38■□□□□ 0.53
SMG6-212ENST00000573153 NUP93Q8N1F7 819 aa18.38■□□□□ 0.53
SMG6-212ENST00000573153 SMARCE1Q969G3 411 aa18.38■□□□□ 0.53
SMG6-212ENST00000573153 EPC1Q9H2F5 836 aa18.38■□□□□ 0.53
SMG6-212ENST00000573153 LINC00597Q9H2U6 94 aa18.38■□□□□ 0.53
SMG6-212ENST00000573153 ECT2Q9H8V3 914 aa18.38■□□□□ 0.53
SMG6-212ENST00000573153 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.38■□□□□ 0.53
SMG6-212ENST00000573153 THG1LQ9NWX6 298 aaKnown RBP18.38■□□□□ 0.53
SMG6-212ENST00000573153 DMXL1Q9Y485 3027 aa18.38■□□□□ 0.53
SMG6-212ENST00000573153 PTPRZ1P23471 2315 aaPredicted RBP18.38■□□□□ 0.53
SMG6-212ENST00000573153 ANTXRLA6NF34 631 aa18.37■□□□□ 0.53
SMG6-212ENST00000573153 LEFTY2O00292 366 aa18.37■□□□□ 0.53
SMG6-212ENST00000573153 GADD45BO75293 160 aaPredicted RBP18.37■□□□□ 0.53
SMG6-212ENST00000573153 KRT13P13646 458 aa18.37■□□□□ 0.53
SMG6-212ENST00000573153 HDCP19113 662 aa18.37■□□□□ 0.53
SMG6-212ENST00000573153 ANXA13P27216 316 aa18.37■□□□□ 0.53
SMG6-212ENST00000573153 PDGFRLQ15198 375 aa18.37■□□□□ 0.53
SMG6-212ENST00000573153 CBWD6Q4V339 395 aa18.37■□□□□ 0.53
SMG6-212ENST00000573153 CBWD3Q5JTY5 395 aa18.37■□□□□ 0.53
SMG6-212ENST00000573153 DGKKQ5KSL6 1271 aa18.37■□□□□ 0.53
SMG6-212ENST00000573153 CBWD5Q5RIA9 395 aa18.37■□□□□ 0.53
SMG6-212ENST00000573153 ANKRD40Q6AI12 368 aa18.37■□□□□ 0.53
SMG6-212ENST00000573153 SLC2A14Q8TDB8 520 aa18.37■□□□□ 0.53
SMG6-212ENST00000573153 WBP2Q969T9 261 aa18.37■□□□□ 0.53
SMG6-212ENST00000573153 SMARCD1Q96GM5 515 aa18.37■□□□□ 0.53
SMG6-212ENST00000573153 FAXDC2Q96IV6 333 aa18.37■□□□□ 0.53
SMG6-212ENST00000573153 NIF3L1Q9GZT8 377 aa18.37■□□□□ 0.53
SMG6-212ENST00000573153 KRT82Q9NSB4 513 aa18.37■□□□□ 0.53
SMG6-212ENST00000573153 TRPM5Q9NZQ8 1165 aa18.37■□□□□ 0.53
SMG6-212ENST00000573153 CETN3O15182 167 aa18.36■□□□□ 0.53
SMG6-212ENST00000573153 SLC16A3O15427 465 aaKnown RBP18.36■□□□□ 0.53
SMG6-212ENST00000573153 CCR3P51677 355 aa18.36■□□□□ 0.53
SMG6-212ENST00000573153 LRRC63Q05C16 580 aa18.36■□□□□ 0.53
SMG6-212ENST00000573153 LRRC32Q14392 662 aa18.36■□□□□ 0.53
SMG6-212ENST00000573153 FOXR2Q6PJQ5 311 aa18.36■□□□□ 0.53
SMG6-212ENST00000573153 ZC3H14Q6PJT7 736 aaKnown RBP18.36■□□□□ 0.53
SMG6-212ENST00000573153 CLEC20AQ6ZU45 233 aa18.36■□□□□ 0.53
SMG6-212ENST00000573153 TNIP3Q96KP6 325 aa18.36■□□□□ 0.53
SMG6-212ENST00000573153 ARID3AQ99856 593 aa18.36■□□□□ 0.53
SMG6-212ENST00000573153 DMAP1Q9NPF5 467 aaPredicted RBP18.36■□□□□ 0.53
SMG6-212ENST00000573153 FAM49BQ9NUQ9 324 aa18.36■□□□□ 0.53
SMG6-212ENST00000573153 DUS2Q9NX74 493 aaKnown RBP18.36■□□□□ 0.53
SMG6-212ENST00000573153 EHD2Q9NZN4 543 aa18.36■□□□□ 0.53
SMG6-212ENST00000573153 COQ4Q9Y3A0 265 aa18.36■□□□□ 0.53
SMG6-212ENST00000573153 COCHO43405 550 aa18.35■□□□□ 0.53
SMG6-212ENST00000573153 GREM1O60565 184 aa18.35■□□□□ 0.53
SMG6-212ENST00000573153 KINO60870 393 aaKnown RBP18.35■□□□□ 0.53
SMG6-212ENST00000573153 AP1G2O75843 785 aa18.35■□□□□ 0.53
SMG6-212ENST00000573153 EGFP01133 1207 aa18.35■□□□□ 0.53
SMG6-212ENST00000573153 OPRD1P41143 372 aa18.35■□□□□ 0.53
SMG6-212ENST00000573153 PPP1R2P41236 205 aa18.35■□□□□ 0.53
SMG6-212ENST00000573153 PPP3CCP48454 512 aa18.35■□□□□ 0.53
SMG6-212ENST00000573153 FKBP3Q00688 224 aaKnown RBP18.35■□□□□ 0.53
SMG6-212ENST00000573153 MESP2Q0VG99 397 aa18.35■□□□□ 0.53
SMG6-212ENST00000573153 KRT39Q6A163 491 aa18.35■□□□□ 0.53
SMG6-212ENST00000573153 DCLK2Q8N568 766 aa18.35■□□□□ 0.53
SMG6-212ENST00000573153 KIAA1958Q8N8K9 716 aa18.35■□□□□ 0.53
SMG6-212ENST00000573153 OVCA2Q8WZ82 227 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms