RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 EIF3EP60228 445 aaKnown RBP17.05■□□□□ 0.32
POLR2A-201ENST00000572844 SLC6A3Q01959 620 aa17.05■□□□□ 0.32
POLR2A-201ENST00000572844 HIF1AQ16665 826 aa17.05■□□□□ 0.32
POLR2A-201ENST00000572844 XKR4Q5GH76 650 aa17.05■□□□□ 0.32
POLR2A-201ENST00000572844 C9orf57Q5W0N0 161 aa17.05■□□□□ 0.32
POLR2A-201ENST00000572844 CCDC121Q6ZUS5 278 aa17.05■□□□□ 0.32
POLR2A-201ENST00000572844 ARCQ7LC44 396 aa17.05■□□□□ 0.32
POLR2A-201ENST00000572844 TTC30AQ86WT1 665 aa17.05■□□□□ 0.32
POLR2A-201ENST00000572844 ANKS4BQ8N8V4 417 aa17.05■□□□□ 0.32
POLR2A-201ENST00000572844 CPT1BQ92523 772 aa17.05■□□□□ 0.32
POLR2A-201ENST00000572844 MAK16Q9BXY0 300 aaKnown RBP17.05■□□□□ 0.32
POLR2A-201ENST00000572844 FAM49AQ9H0Q0 323 aaPredicted RBP17.05■□□□□ 0.32
POLR2A-201ENST00000572844 HESX1Q9UBX0 185 aa17.05■□□□□ 0.32
POLR2A-201ENST00000572844 SLC24A2Q9UI40 661 aa17.05■□□□□ 0.32
POLR2A-201ENST00000572844 ZMYND8Q9ULU4 1186 aaPredicted RBP17.05■□□□□ 0.32
POLR2A-201ENST00000572844 EXOC1LA0A1B0GW35 172 aa17.04■□□□□ 0.32
POLR2A-201ENST00000572844 GCAP28676 217 aa17.04■□□□□ 0.32
POLR2A-201ENST00000572844 RPL34P49207 117 aaKnown RBP17.04■□□□□ 0.32
POLR2A-201ENST00000572844 GDF10P55107 478 aa17.04■□□□□ 0.32
POLR2A-201ENST00000572844 MAP2K5Q13163 448 aa17.04■□□□□ 0.32
POLR2A-201ENST00000572844 DPYSL3Q14195 570 aa17.04■□□□□ 0.32
POLR2A-201ENST00000572844 TAF5Q15542 800 aa17.04■□□□□ 0.32
POLR2A-201ENST00000572844 CCDC14Q49A88 953 aa17.04■□□□□ 0.32
POLR2A-201ENST00000572844 LACTB2Q53H82 288 aaPredicted RBP17.04■□□□□ 0.32
POLR2A-201ENST00000572844 PMF1Q6P1K2 205 aa17.04■□□□□ 0.32
POLR2A-201ENST00000572844 PPP1R21Q6ZMI0 780 aa17.04■□□□□ 0.32
POLR2A-201ENST00000572844 ARHGEF18Q6ZSZ5 1173 aa17.04■□□□□ 0.32
POLR2A-201ENST00000572844 DPH6Q7L8W6 267 aa17.04■□□□□ 0.32
POLR2A-201ENST00000572844 C12orf29Q8N999 325 aa17.04■□□□□ 0.32
POLR2A-201ENST00000572844 CKAP2Q8WWK9 683 aa17.04■□□□□ 0.32
POLR2A-201ENST00000572844 DNAI2Q9GZS0 605 aa17.04■□□□□ 0.32
POLR2A-201ENST00000572844 CDHR5Q9HBB8 845 aa17.04■□□□□ 0.32
POLR2A-201ENST00000572844 SENP1Q9P0U3 644 aa17.04■□□□□ 0.32
POLR2A-201ENST00000572844 SAE1Q9UBE0 346 aaPredicted RBP17.04■□□□□ 0.32
POLR2A-201ENST00000572844 TUBGCP4Q9UGJ1 667 aa17.04■□□□□ 0.32
POLR2A-201ENST00000572844 TRIP12Q14669 1992 aaPredicted RBP17.04■□□□□ 0.32
POLR2A-201ENST00000572844 GOLGA6L7A0A1B0GV03 622 aa17.03■□□□□ 0.32
POLR2A-201ENST00000572844 PIRO00625 290 aa17.03■□□□□ 0.32
POLR2A-201ENST00000572844 PPEF2O14830 753 aa17.03■□□□□ 0.32
POLR2A-201ENST00000572844 XPOTO43592 962 aaKnown RBP17.03■□□□□ 0.32
POLR2A-201ENST00000572844 ECM2O94769 699 aaPredicted RBP17.03■□□□□ 0.32
POLR2A-201ENST00000572844 RBP3P10745 1247 aa17.03■□□□□ 0.32
POLR2A-201ENST00000572844 GHRP10912 638 aa17.03■□□□□ 0.32
POLR2A-201ENST00000572844 CREB1P16220 341 aa17.03■□□□□ 0.32
POLR2A-201ENST00000572844 LIG3P49916 1009 aa17.03■□□□□ 0.32
POLR2A-201ENST00000572844 CDH6P55285 790 aa17.03■□□□□ 0.32
POLR2A-201ENST00000572844 PDIA2Q13087 525 aaKnown RBP17.03■□□□□ 0.32
POLR2A-201ENST00000572844 MFSD10Q14728 455 aa17.03■□□□□ 0.32
POLR2A-201ENST00000572844 ACOT1Q86TX2 421 aa17.03■□□□□ 0.32
POLR2A-201ENST00000572844 TRABD2AQ86V40 505 aa17.03■□□□□ 0.32
POLR2A-201ENST00000572844 UNC45BQ8IWX7 931 aa17.03■□□□□ 0.32
POLR2A-201ENST00000572844 CCDC13Q8IYE1 715 aa17.03■□□□□ 0.32
POLR2A-201ENST00000572844 ZBED8Q8IZ13 594 aa17.03■□□□□ 0.32
POLR2A-201ENST00000572844 CRYBG2Q8N1P7 616 aa17.03■□□□□ 0.32
POLR2A-201ENST00000572844 KHSRPQ92945 711 aaKnown RBP eCLIP17.03■□□□□ 0.32
POLR2A-201ENST00000572844 RNF157Q96PX1 679 aa17.03■□□□□ 0.32
POLR2A-201ENST00000572844 OSMRQ99650 979 aa17.03■□□□□ 0.32
POLR2A-201ENST00000572844 CALN1Q9BXU9 219 aa17.03■□□□□ 0.32
POLR2A-201ENST00000572844 CXCL16Q9H2A7 254 aa17.03■□□□□ 0.32
POLR2A-201ENST00000572844 KDM4CQ9H3R0 1056 aa17.03■□□□□ 0.32
POLR2A-201ENST00000572844 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.03■□□□□ 0.32
POLR2A-201ENST00000572844 GDAP2Q9NXN4 497 aa17.03■□□□□ 0.32
POLR2A-201ENST00000572844 SAMD15Q9P1V8 674 aa17.03■□□□□ 0.32
POLR2A-201ENST00000572844 NME7Q9Y5B8 376 aa17.03■□□□□ 0.32
POLR2A-201ENST00000572844 KCNE1P15382 129 aa17.03■□□□□ 0.32
POLR2A-201ENST00000572844 PNPLA4P41247 253 aa17.03■□□□□ 0.32
POLR2A-201ENST00000572844 RNF187Q5TA31 235 aaPredicted RBP17.03■□□□□ 0.32
POLR2A-201ENST00000572844 LIMS2Q7Z4I7 341 aa17.03■□□□□ 0.32
POLR2A-201ENST00000572844 TAX1BP1Q86VP1 789 aa17.03■□□□□ 0.32
POLR2A-201ENST00000572844 MICALL1Q8N3F8 863 aa17.03■□□□□ 0.32
POLR2A-201ENST00000572844 DYDC1Q8WWB3 177 aa17.03■□□□□ 0.32
POLR2A-201ENST00000572844 SGSM3Q96HU1 749 aa17.03■□□□□ 0.32
POLR2A-201ENST00000572844 KCNK9Q9NPC2 374 aa17.03■□□□□ 0.32
POLR2A-201ENST00000572844 Q9Y3F1 56 aa17.03■□□□□ 0.32
POLR2A-201ENST00000572844 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.03■□□□□ 0.32
POLR2A-201ENST00000572844 MDM4O15151 490 aa17.02■□□□□ 0.32
POLR2A-201ENST00000572844 RECQL4O94761 1208 aa17.02■□□□□ 0.32
POLR2A-201ENST00000572844 VIMP08670 466 aaKnown RBP17.02■□□□□ 0.32
POLR2A-201ENST00000572844 ZNF865P0CJ78 1059 aaPredicted RBP17.02■□□□□ 0.32
POLR2A-201ENST00000572844 TGM2P21980 687 aa17.02■□□□□ 0.32
POLR2A-201ENST00000572844 SDC4P31431 198 aa17.02■□□□□ 0.32
POLR2A-201ENST00000572844 PHBP35232 272 aa17.02■□□□□ 0.32
POLR2A-201ENST00000572844 PSEN2P49810 448 aa17.02■□□□□ 0.32
POLR2A-201ENST00000572844 ROR1Q01973 937 aa17.02■□□□□ 0.32
POLR2A-201ENST00000572844 ACTN3Q08043 901 aaPredicted RBP17.02■□□□□ 0.32
POLR2A-201ENST00000572844 TMEM62Q0P6H9 643 aa17.02■□□□□ 0.32
POLR2A-201ENST00000572844 FASTKD3Q14CZ7 662 aaKnown RBP17.02■□□□□ 0.32
POLR2A-201ENST00000572844 SOWAHAQ2M3V2 549 aa17.02■□□□□ 0.32
POLR2A-201ENST00000572844 C15orf59Q2T9L4 293 aaPredicted RBP17.02■□□□□ 0.32
POLR2A-201ENST00000572844 EFHC2Q5JST6 749 aa17.02■□□□□ 0.32
POLR2A-201ENST00000572844 SH3PXD2AQ5TCZ1 1133 aa17.02■□□□□ 0.32
POLR2A-201ENST00000572844 SPATA18Q8TC71 538 aa17.02■□□□□ 0.32
POLR2A-201ENST00000572844 CCT6BQ92526 530 aa17.02■□□□□ 0.32
POLR2A-201ENST00000572844 PIWIL1Q96J94 861 aaKnown RBP17.02■□□□□ 0.32
POLR2A-201ENST00000572844 ZNF560Q96MR9 790 aa17.02■□□□□ 0.32
POLR2A-201ENST00000572844 TRIM6Q9C030 488 aaPredicted RBP17.02■□□□□ 0.32
POLR2A-201ENST00000572844 NKIRAS1Q9NYS0 192 aa17.02■□□□□ 0.32
POLR2A-201ENST00000572844 CFAP69A5D8W1 941 aa17.01■□□□□ 0.31
POLR2A-201ENST00000572844 PRPF4O43172 522 aaKnown RBP eCLIP17.01■□□□□ 0.31
POLR2A-201ENST00000572844 PTPN9P43378 593 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms