RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 CDC25CP30307 473 aa15.31■□□□□ 0.04
NPLOC4-209ENST00000572760 SLC5A3P53794 718 aa15.31■□□□□ 0.04
NPLOC4-209ENST00000572760 CDR2Q01850 454 aa15.31■□□□□ 0.04
NPLOC4-209ENST00000572760 KLHL30Q0D2K2 578 aa15.31■□□□□ 0.04
NPLOC4-209ENST00000572760 MEA1Q16626 185 aa15.31■□□□□ 0.04
NPLOC4-209ENST00000572760 PKDCCQ504Y2 493 aa15.31■□□□□ 0.04
NPLOC4-209ENST00000572760 TDRD12Q587J7 1177 aaKnown RBP15.31■□□□□ 0.04
NPLOC4-209ENST00000572760 SIX6OS1Q8N1H7 587 aa15.31■□□□□ 0.04
NPLOC4-209ENST00000572760 TMEM35BQ8NCS4 154 aa15.31■□□□□ 0.04
NPLOC4-209ENST00000572760 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.31■□□□□ 0.04
NPLOC4-209ENST00000572760 FBXO32Q969P5 355 aa15.31■□□□□ 0.04
NPLOC4-209ENST00000572760 ATXN3LQ9H3M9 355 aa15.31■□□□□ 0.04
NPLOC4-209ENST00000572760 ZNF334Q9HCZ1 680 aaPredicted RBP15.31■□□□□ 0.04
NPLOC4-209ENST00000572760 ZNHIT6Q9NWK9 470 aaKnown RBP15.31■□□□□ 0.04
NPLOC4-209ENST00000572760 COMMD8Q9NX08 183 aa15.31■□□□□ 0.04
NPLOC4-209ENST00000572760 AIPL1Q9NZN9 384 aa15.31■□□□□ 0.04
NPLOC4-209ENST00000572760 CLUHO75153 1309 aa15.31■□□□□ 0.04
NPLOC4-209ENST00000572760 GOLGA6L6A8MZA4 724 aa15.3■□□□□ 0.04
NPLOC4-209ENST00000572760 TULP2O00295 520 aa15.3■□□□□ 0.04
NPLOC4-209ENST00000572760 ABL1P00519 1130 aa15.3■□□□□ 0.04
NPLOC4-209ENST00000572760 MMEP08473 750 aa15.3■□□□□ 0.04
NPLOC4-209ENST00000572760 CFHP08603 1231 aa15.3■□□□□ 0.04
NPLOC4-209ENST00000572760 LCP1P13796 627 aa15.3■□□□□ 0.04
NPLOC4-209ENST00000572760 GPD2P43304 727 aa15.3■□□□□ 0.04
NPLOC4-209ENST00000572760 PLA2G4AP47712 749 aa15.3■□□□□ 0.04
NPLOC4-209ENST00000572760 SNX16P57768 344 aa15.3■□□□□ 0.04
NPLOC4-209ENST00000572760 TAF10Q12962 218 aa15.3■□□□□ 0.04
NPLOC4-209ENST00000572760 ARHGAP15Q53QZ3 475 aa15.3■□□□□ 0.04
NPLOC4-209ENST00000572760 GET4Q7L5D6 327 aaPredicted RBP15.3■□□□□ 0.04
NPLOC4-209ENST00000572760 IRF2BP2Q7Z5L9 587 aa15.3■□□□□ 0.04
NPLOC4-209ENST00000572760 CNGA4Q8IV77 575 aa15.3■□□□□ 0.04
NPLOC4-209ENST00000572760 OR8K1Q8NGG5 319 aa15.3■□□□□ 0.04
NPLOC4-209ENST00000572760 SCAMP5Q8TAC9 235 aa15.3■□□□□ 0.04
NPLOC4-209ENST00000572760 SLC20A1Q8WUM9 679 aa15.3■□□□□ 0.04
NPLOC4-209ENST00000572760 SLC35F5Q8WV83 523 aa15.3■□□□□ 0.04
NPLOC4-209ENST00000572760 SUSD6Q92537 303 aa15.3■□□□□ 0.04
NPLOC4-209ENST00000572760 SYN2Q92777 582 aaPredicted RBP15.3■□□□□ 0.04
NPLOC4-209ENST00000572760 TRMT2BQ96GJ1 504 aaKnown RBP15.3■□□□□ 0.04
NPLOC4-209ENST00000572760 HSFY1Q96LI6 401 aa15.3■□□□□ 0.04
NPLOC4-209ENST00000572760 AGPAT1Q99943 283 aa15.3■□□□□ 0.04
NPLOC4-209ENST00000572760 LHX5Q9H2C1 402 aa15.3■□□□□ 0.04
NPLOC4-209ENST00000572760 POMKQ9H5K3 350 aa15.3■□□□□ 0.04
NPLOC4-209ENST00000572760 SYNCQ9H7C4 482 aa15.3■□□□□ 0.04
NPLOC4-209ENST00000572760 TRPM5Q9NZQ8 1165 aa15.3■□□□□ 0.04
NPLOC4-209ENST00000572760 NOCTQ9UK39 431 aaKnown RBP15.3■□□□□ 0.04
NPLOC4-209ENST00000572760 A0A1W2PRU2 124 aa15.29■□□□□ 0.04
NPLOC4-209ENST00000572760 HHLA1C9JL84 531 aa15.29■□□□□ 0.04
NPLOC4-209ENST00000572760 AKR1B15C9JRZ8 316 aaPredicted RBP15.29■□□□□ 0.04
NPLOC4-209ENST00000572760 TNFRSF10BO14763 440 aa15.29■□□□□ 0.04
NPLOC4-209ENST00000572760 SKILP12757 684 aa15.29■□□□□ 0.04
NPLOC4-209ENST00000572760 GJA1P17302 382 aa15.29■□□□□ 0.04
NPLOC4-209ENST00000572760 GBP2P32456 591 aaPredicted RBP15.29■□□□□ 0.04
NPLOC4-209ENST00000572760 ACADSBP45954 432 aa15.29■□□□□ 0.04
NPLOC4-209ENST00000572760 TKTL1P51854 596 aa15.29■□□□□ 0.04
NPLOC4-209ENST00000572760 KIF11P52732 1056 aa15.29■□□□□ 0.04
NPLOC4-209ENST00000572760 EPHA5P54756 1037 aa15.29■□□□□ 0.04
NPLOC4-209ENST00000572760 ADKP55263 362 aaKnown RBP15.29■□□□□ 0.04
NPLOC4-209ENST00000572760 USP46P62068 366 aa15.29■□□□□ 0.04
NPLOC4-209ENST00000572760 MRPS5P82675 430 aaKnown RBP15.29■□□□□ 0.04
NPLOC4-209ENST00000572760 ADIGQ0VDE8 80 aa15.29■□□□□ 0.04
NPLOC4-209ENST00000572760 PMF1Q6P1K2 205 aa15.29■□□□□ 0.04
NPLOC4-209ENST00000572760 TRIM72Q6ZMU5 477 aa15.29■□□□□ 0.04
NPLOC4-209ENST00000572760 GPRIN1Q7Z2K8 1008 aa15.29■□□□□ 0.04
NPLOC4-209ENST00000572760 VPS36Q86VN1 386 aa15.29■□□□□ 0.04
NPLOC4-209ENST00000572760 TMC8Q8IU68 726 aa15.29■□□□□ 0.04
NPLOC4-209ENST00000572760 MSANTD4Q8NCY6 345 aa15.29■□□□□ 0.04
NPLOC4-209ENST00000572760 C1orf131Q8NDD1 294 aaKnown RBP15.29■□□□□ 0.04
NPLOC4-209ENST00000572760 PDZD8Q8NEN9 1154 aa15.29■□□□□ 0.04
NPLOC4-209ENST00000572760 IPO4Q8TEX9 1081 aaKnown RBP15.29■□□□□ 0.04
NPLOC4-209ENST00000572760 ING5Q8WYH8 240 aa15.29■□□□□ 0.04
NPLOC4-209ENST00000572760 KCTD13Q8WZ19 329 aa15.29■□□□□ 0.04
NPLOC4-209ENST00000572760 DDX1Q92499 740 aaKnown RBP15.29■□□□□ 0.04
NPLOC4-209ENST00000572760 MRPS31Q92665 395 aaKnown RBP15.29■□□□□ 0.04
NPLOC4-209ENST00000572760 MYRFLQ96LU7 910 aa15.29■□□□□ 0.04
NPLOC4-209ENST00000572760 LRRC3Q9BY71 257 aa15.29■□□□□ 0.04
NPLOC4-209ENST00000572760 SLITRK6Q9H5Y7 841 aa15.29■□□□□ 0.04
NPLOC4-209ENST00000572760 HAUS4Q9H6D7 363 aa15.29■□□□□ 0.04
NPLOC4-209ENST00000572760 AVENQ9NQS1 362 aaPredicted RBP15.29■□□□□ 0.04
NPLOC4-209ENST00000572760 BZW2Q9Y6E2 419 aaKnown RBP15.29■□□□□ 0.04
NPLOC4-209ENST00000572760 PIK3R2O00459 728 aa15.28■□□□□ 0.04
NPLOC4-209ENST00000572760 MFAP3LO75121 409 aa15.28■□□□□ 0.04
NPLOC4-209ENST00000572760 LSM8O95777 96 aaKnown RBP15.28■□□□□ 0.04
NPLOC4-209ENST00000572760 SERPING1P05155 500 aa15.28■□□□□ 0.04
NPLOC4-209ENST00000572760 USP17L7P0C7H9 530 aa15.28■□□□□ 0.04
NPLOC4-209ENST00000572760 IL9P15248 144 aa15.28■□□□□ 0.04
NPLOC4-209ENST00000572760 CHRNB2P17787 502 aa15.28■□□□□ 0.04
NPLOC4-209ENST00000572760 CDC25BP30305 580 aa15.28■□□□□ 0.04
NPLOC4-209ENST00000572760 PRKCIP41743 596 aa15.28■□□□□ 0.04
NPLOC4-209ENST00000572760 PPP3CCP48454 512 aa15.28■□□□□ 0.04
NPLOC4-209ENST00000572760 FMO1Q01740 532 aa15.28■□□□□ 0.04
NPLOC4-209ENST00000572760 GOLGA8FQ08AF8 430 aa15.28■□□□□ 0.04
NPLOC4-209ENST00000572760 GOLGA8DPQ0D2H9 430 aa15.28■□□□□ 0.04
NPLOC4-209ENST00000572760 TBX2Q13207 712 aaPredicted RBP15.28■□□□□ 0.04
NPLOC4-209ENST00000572760 SMAD2Q15796 467 aaKnown RBP15.28■□□□□ 0.04
NPLOC4-209ENST00000572760 SLC5A9Q2M3M2 681 aa15.28■□□□□ 0.04
NPLOC4-209ENST00000572760 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.28■□□□□ 0.04
NPLOC4-209ENST00000572760 ERICH1Q86X53 443 aa15.28■□□□□ 0.04
NPLOC4-209ENST00000572760 SPC24Q8NBT2 197 aa15.28■□□□□ 0.04
NPLOC4-209ENST00000572760 ITFG1Q8TB96 612 aa15.28■□□□□ 0.04
NPLOC4-209ENST00000572760 STK32AQ8WU08 396 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms