RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 CIZ1Q9ULV3 898 aaPredicted RBP20.49■□□□□ 0.87
NUP88-203ENST00000572019 EXOC7Q9UPT5 735 aa20.49■□□□□ 0.87
NUP88-203ENST00000572019 SMC3Q9UQE7 1217 aa20.49■□□□□ 0.87
NUP88-203ENST00000572019 FRMD3A2A2Y4 597 aa20.48■□□□□ 0.87
NUP88-203ENST00000572019 F8VP50 259 aa20.48■□□□□ 0.87
NUP88-203ENST00000572019 BMP15O95972 392 aa20.48■□□□□ 0.87
NUP88-203ENST00000572019 TMEM191BP0C7N4 346 aa20.48■□□□□ 0.87
NUP88-203ENST00000572019 IDEP14735 1019 aa20.48■□□□□ 0.87
NUP88-203ENST00000572019 GAP43P17677 238 aa20.48■□□□□ 0.87
NUP88-203ENST00000572019 KIR2DL1P43626 348 aaPredicted RBP20.48■□□□□ 0.87
NUP88-203ENST00000572019 MAPK8P45983 427 aa20.48■□□□□ 0.87
NUP88-203ENST00000572019 SLC7A9P82251 487 aa20.48■□□□□ 0.87
NUP88-203ENST00000572019 KDSRQ06136 332 aa20.48■□□□□ 0.87
NUP88-203ENST00000572019 COL9A2Q14055 689 aaPredicted RBP20.48■□□□□ 0.87
NUP88-203ENST00000572019 MAP7D1Q3KQU3 841 aa20.48■□□□□ 0.87
NUP88-203ENST00000572019 TRIM61Q5EBN2 209 aa20.48■□□□□ 0.87
NUP88-203ENST00000572019 DENND5BQ6ZUT9 1274 aa20.48■□□□□ 0.87
NUP88-203ENST00000572019 SYCP3Q8IZU3 236 aa20.48■□□□□ 0.87
NUP88-203ENST00000572019 PHTF2Q8N3S3 785 aa20.48■□□□□ 0.87
NUP88-203ENST00000572019 PANK2Q9BZ23 570 aa20.48■□□□□ 0.87
NUP88-203ENST00000572019 DPEP3Q9H4B8 488 aa20.48■□□□□ 0.87
NUP88-203ENST00000572019 OLFML3Q9NRN5 406 aa20.48■□□□□ 0.87
NUP88-203ENST00000572019 TRPM5Q9NZQ8 1165 aa20.48■□□□□ 0.87
NUP88-203ENST00000572019 CDH9Q9ULB4 789 aa20.48■□□□□ 0.87
NUP88-203ENST00000572019 HYAL3O43820 417 aaPredicted RBP20.47■□□□□ 0.87
NUP88-203ENST00000572019 KAT7O95251 611 aa20.47■□□□□ 0.87
NUP88-203ENST00000572019 OAS1P00973 400 aaKnown RBP20.47■□□□□ 0.87
NUP88-203ENST00000572019 HOXD13P35453 343 aa20.47■□□□□ 0.87
NUP88-203ENST00000572019 MRPS21P82921 87 aaKnown RBP20.47■□□□□ 0.87
NUP88-203ENST00000572019 TAF10Q12962 218 aa20.47■□□□□ 0.87
NUP88-203ENST00000572019 MDH1BQ5I0G3 518 aa20.47■□□□□ 0.87
NUP88-203ENST00000572019 RRAGBQ5VZM2 374 aa20.47■□□□□ 0.87
NUP88-203ENST00000572019 VSTM1Q6UX27 236 aa20.47■□□□□ 0.87
NUP88-203ENST00000572019 C4orf50Q6ZRC1 276 aa20.47■□□□□ 0.87
NUP88-203ENST00000572019 BRAPQ7Z569 592 aa20.47■□□□□ 0.87
NUP88-203ENST00000572019 GPD1LQ8N335 351 aa20.47■□□□□ 0.87
NUP88-203ENST00000572019 DEFB119Q8N690 84 aa20.47■□□□□ 0.87
NUP88-203ENST00000572019 WBP2Q969T9 261 aa20.47■□□□□ 0.87
NUP88-203ENST00000572019 CFAP97Q9P2B7 532 aa20.47■□□□□ 0.87
NUP88-203ENST00000572019 HCN2Q9UL51 889 aa20.47■□□□□ 0.87
NUP88-203ENST00000572019 DMXL2Q8TDJ6 3036 aa20.46■□□□□ 0.87
NUP88-203ENST00000572019 SPAARA0A1B0GVQ0 90 aa20.46■□□□□ 0.87
NUP88-203ENST00000572019 SRRM3A6NNA2 597 aaPredicted RBP20.46■□□□□ 0.87
NUP88-203ENST00000572019 LDHAP00338 332 aaKnown RBP20.46■□□□□ 0.87
NUP88-203ENST00000572019 ABL1P00519 1130 aa20.46■□□□□ 0.87
NUP88-203ENST00000572019 WARSP23381 471 aaKnown RBP20.46■□□□□ 0.87
NUP88-203ENST00000572019 SV2BQ7L1I2 683 aa20.46■□□□□ 0.87
NUP88-203ENST00000572019 HMGB4Q8WW32 186 aa20.46■□□□□ 0.87
NUP88-203ENST00000572019 PNKPQ96T60 521 aa20.46■□□□□ 0.87
NUP88-203ENST00000572019 ZNF518BQ9C0D4 1074 aa20.46■□□□□ 0.87
NUP88-203ENST00000572019 EVLQ9UI08 416 aaPredicted RBP20.46■□□□□ 0.87
NUP88-203ENST00000572019 KLK13Q9UKR3 277 aa20.46■□□□□ 0.87
NUP88-203ENST00000572019 MYH10P35580 1976 aa20.46■□□□□ 0.87
NUP88-203ENST00000572019 CLDN5O00501 218 aa20.45■□□□□ 0.86
NUP88-203ENST00000572019 CST3P01034 146 aaPredicted RBP20.45■□□□□ 0.86
NUP88-203ENST00000572019 ENGP17813 658 aa20.45■□□□□ 0.86
NUP88-203ENST00000572019 ITPKAP23677 461 aa20.45■□□□□ 0.86
NUP88-203ENST00000572019 IFRD2Q12894 506 aaPredicted RBP20.45■□□□□ 0.86
NUP88-203ENST00000572019 DPH6Q7L8W6 267 aa20.45■□□□□ 0.86
NUP88-203ENST00000572019 C11orf74Q86VG3 221 aa20.45■□□□□ 0.86
NUP88-203ENST00000572019 OR2I1PQ8NGU4 316 aa20.45■□□□□ 0.86
NUP88-203ENST00000572019 MYCBPAPQ8TBZ2 947 aa20.45■□□□□ 0.86
NUP88-203ENST00000572019 ERLEC1Q96DZ1 483 aa20.45■□□□□ 0.86
NUP88-203ENST00000572019 ANKRD36BP1Q96IX9 119 aa20.45■□□□□ 0.86
NUP88-203ENST00000572019 ZFRQ96KR1 1074 aaKnown RBP20.45■□□□□ 0.86
NUP88-203ENST00000572019 PANK4Q9NVE7 773 aa20.45■□□□□ 0.86
NUP88-203ENST00000572019 CCDC39Q9UFE4 941 aa20.45■□□□□ 0.86
NUP88-203ENST00000572019 PCDHB13Q9Y5F0 798 aa20.45■□□□□ 0.86
NUP88-203ENST00000572019 SRPRBQ9Y5M8 271 aaKnown RBP20.45■□□□□ 0.86
NUP88-203ENST00000572019 TCRBV21S2A2A0A5A6 115 aa20.44■□□□□ 0.86
NUP88-203ENST00000572019 TRIM24O15164 1050 aa20.44■□□□□ 0.86
NUP88-203ENST00000572019 FAM193AP78312 1265 aa20.44■□□□□ 0.86
NUP88-203ENST00000572019 NOP14P78316 857 aaKnown RBP20.44■□□□□ 0.86
NUP88-203ENST00000572019 CEBPZQ03701 1054 aaKnown RBP20.44■□□□□ 0.86
NUP88-203ENST00000572019 MYO1EQ12965 1108 aa20.44■□□□□ 0.86
NUP88-203ENST00000572019 RESTQ13127 1097 aa20.44■□□□□ 0.86
NUP88-203ENST00000572019 LY6G5CQ5SRR4 150 aa20.44■□□□□ 0.86
NUP88-203ENST00000572019 LPCAT2Q7L5N7 544 aa20.44■□□□□ 0.86
NUP88-203ENST00000572019 WHAMMQ8TF30 809 aa20.44■□□□□ 0.86
NUP88-203ENST00000572019 MMS19Q96T76 1030 aa20.44■□□□□ 0.86
NUP88-203ENST00000572019 ARHGEF4Q9NR80 690 aa20.44■□□□□ 0.86
NUP88-203ENST00000572019 A0A0A0MRY4 1105 aa20.43■□□□□ 0.86
NUP88-203ENST00000572019 VPS37CA5D8V6 355 aaPredicted RBP20.43■□□□□ 0.86
NUP88-203ENST00000572019 TNFRSF10BO14763 440 aa20.43■□□□□ 0.86
NUP88-203ENST00000572019 APODP05090 189 aa20.43■□□□□ 0.86
NUP88-203ENST00000572019 MBL2P11226 248 aaPredicted RBP20.43■□□□□ 0.86
NUP88-203ENST00000572019 ADH5P11766 374 aa20.43■□□□□ 0.86
NUP88-203ENST00000572019 PFKLP17858 780 aa20.43■□□□□ 0.86
NUP88-203ENST00000572019 ANXA13P27216 316 aa20.43■□□□□ 0.86
NUP88-203ENST00000572019 HS2ST1Q7LGA3 356 aa20.43■□□□□ 0.86
NUP88-203ENST00000572019 PIP4P1Q86T03 277 aa20.43■□□□□ 0.86
NUP88-203ENST00000572019 MIB1Q86YT6 1006 aa20.43■□□□□ 0.86
NUP88-203ENST00000572019 SYT12Q8IV01 421 aa20.43■□□□□ 0.86
NUP88-203ENST00000572019 NAT16Q8N8M0 369 aa20.43■□□□□ 0.86
NUP88-203ENST00000572019 CCDC26Q8TAB7 109 aa20.43■□□□□ 0.86
NUP88-203ENST00000572019 ZCCHC14Q8WYQ9 949 aaKnown RBP20.43■□□□□ 0.86
NUP88-203ENST00000572019 ELMO3Q96BJ8 720 aa20.43■□□□□ 0.86
NUP88-203ENST00000572019 C8orf48Q96LL4 319 aa20.43■□□□□ 0.86
NUP88-203ENST00000572019 B3GNT5Q9BYG0 378 aa20.43■□□□□ 0.86
NUP88-203ENST00000572019 GZF1Q9H116 711 aaPredicted RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms