RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 DHCR24Q15392 516 aa18.69■□□□□ 0.58
CIITA-206ENST00000571190 STPG1Q5TH74 334 aa18.69■□□□□ 0.58
CIITA-206ENST00000571190 PAQR9Q6ZVX9 377 aa18.69■□□□□ 0.58
CIITA-206ENST00000571190 KIAA1958Q8N8K9 716 aa18.69■□□□□ 0.58
CIITA-206ENST00000571190 B3GALNT2Q8NCR0 500 aa18.69■□□□□ 0.58
CIITA-206ENST00000571190 ELMO3Q96BJ8 720 aa18.69■□□□□ 0.58
CIITA-206ENST00000571190 ELOVL4Q9GZR5 314 aa18.69■□□□□ 0.58
CIITA-206ENST00000571190 NXF1Q9UBU9 619 aaKnown RBP18.69■□□□□ 0.58
CIITA-206ENST00000571190 INVSQ9Y283 1065 aa18.69■□□□□ 0.58
CIITA-206ENST00000571190 SPTBN2O15020 2390 aa18.68■□□□□ 0.58
CIITA-206ENST00000571190 PVALEFA0A1B0GWK0 134 aa18.68■□□□□ 0.58
CIITA-206ENST00000571190 A8MXQ7 604 aa18.68■□□□□ 0.58
CIITA-206ENST00000571190 ATICP31939 592 aa18.68■□□□□ 0.58
CIITA-206ENST00000571190 DGKEP52429 567 aa18.68■□□□□ 0.58
CIITA-206ENST00000571190 SEC13P55735 322 aa18.68■□□□□ 0.58
CIITA-206ENST00000571190 KNOP1Q1ED39 458 aaKnown RBP18.68■□□□□ 0.58
CIITA-206ENST00000571190 C2orf27AQ580R0 203 aa18.68■□□□□ 0.58
CIITA-206ENST00000571190 TDRD10Q5VZ19 366 aaKnown RBP18.68■□□□□ 0.58
CIITA-206ENST00000571190 IL31Q6EBC2 164 aa18.68■□□□□ 0.58
CIITA-206ENST00000571190 RHBDF2Q6PJF5 856 aa18.68■□□□□ 0.58
CIITA-206ENST00000571190 RASSF3Q86WH2 238 aa18.68■□□□□ 0.58
CIITA-206ENST00000571190 C12orf40Q86WS4 652 aa18.68■□□□□ 0.58
CIITA-206ENST00000571190 GRAMD1CQ8IYS0 662 aa18.68■□□□□ 0.58
CIITA-206ENST00000571190 ZFRQ96KR1 1074 aaKnown RBP18.68■□□□□ 0.58
CIITA-206ENST00000571190 KCNK16Q96T55 309 aa18.68■□□□□ 0.58
CIITA-206ENST00000571190 SDCBP2Q9H190 292 aa18.68■□□□□ 0.58
CIITA-206ENST00000571190 SMYD3Q9H7B4 428 aa18.68■□□□□ 0.58
CIITA-206ENST00000571190 VRTNQ9H8Y1 702 aa18.68■□□□□ 0.58
CIITA-206ENST00000571190 MAGEF1Q9HAY2 307 aa18.68■□□□□ 0.58
CIITA-206ENST00000571190 VPS45Q9NRW7 570 aa18.68■□□□□ 0.58
CIITA-206ENST00000571190 EHD2Q9NZN4 543 aa18.68■□□□□ 0.58
CIITA-206ENST00000571190 CFAP97Q9P2B7 532 aa18.68■□□□□ 0.58
CIITA-206ENST00000571190 PCDHA7Q9UN72 937 aa18.68■□□□□ 0.58
CIITA-206ENST00000571190 BCLAF3A2AJT9 711 aaKnown RBP18.67■□□□□ 0.58
CIITA-206ENST00000571190 ABL1P00519 1130 aa18.67■□□□□ 0.58
CIITA-206ENST00000571190 AFMP43652 599 aa18.67■□□□□ 0.58
CIITA-206ENST00000571190 CLDN10P78369 228 aa18.67■□□□□ 0.58
CIITA-206ENST00000571190 TRPC3Q13507 836 aa18.67■□□□□ 0.58
CIITA-206ENST00000571190 FOXD4L6Q3SYB3 417 aaPredicted RBP18.67■□□□□ 0.58
CIITA-206ENST00000571190 N4BP2L1Q5TBK1 243 aaPredicted RBP18.67■□□□□ 0.58
CIITA-206ENST00000571190 RESP18Q5W5W9 173 aa18.67■□□□□ 0.58
CIITA-206ENST00000571190 TMEM92Q6UXU6 159 aa18.67■□□□□ 0.58
CIITA-206ENST00000571190 FOXD4L3Q6VB84 417 aaPredicted RBP18.67■□□□□ 0.58
CIITA-206ENST00000571190 CCDC33Q8N5R6 958 aa18.67■□□□□ 0.58
CIITA-206ENST00000571190 TSTD1Q8NFU3 115 aa18.67■□□□□ 0.58
CIITA-206ENST00000571190 PARD3BQ8TEW8 1205 aa18.67■□□□□ 0.58
CIITA-206ENST00000571190 DDX1Q92499 740 aaKnown RBP18.67■□□□□ 0.58
CIITA-206ENST00000571190 TPSD1Q9BZJ3 242 aa18.67■□□□□ 0.58
CIITA-206ENST00000571190 DMAC2Q9NW81 257 aa18.67■□□□□ 0.58
CIITA-206ENST00000571190 IL37Q9NZH6 218 aa18.67■□□□□ 0.58
CIITA-206ENST00000571190 MMP17Q9ULZ9 603 aa18.67■□□□□ 0.58
CIITA-206ENST00000571190 A0A0A0MRY4 1105 aa18.66■□□□□ 0.58
CIITA-206ENST00000571190 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.66■□□□□ 0.58
CIITA-206ENST00000571190 LRRIQ3A6PVS8 624 aaPredicted RBP18.66■□□□□ 0.58
CIITA-206ENST00000571190 TNFRSF10BO14763 440 aa18.66■□□□□ 0.58
CIITA-206ENST00000571190 KLRC4O43908 158 aa18.66■□□□□ 0.58
CIITA-206ENST00000571190 EXOC3O60645 756 aa18.66■□□□□ 0.58
CIITA-206ENST00000571190 VNN1O95497 513 aa18.66■□□□□ 0.58
CIITA-206ENST00000571190 C4BPAP04003 597 aaKnown RBP18.66■□□□□ 0.58
CIITA-206ENST00000571190 BCKDHBP21953 392 aa18.66■□□□□ 0.58
CIITA-206ENST00000571190 YWHAQP27348 245 aa18.66■□□□□ 0.58
CIITA-206ENST00000571190 IFRD2Q12894 506 aaPredicted RBP18.66■□□□□ 0.58
CIITA-206ENST00000571190 ELF2Q15723 593 aa18.66■□□□□ 0.58
CIITA-206ENST00000571190 CRY1Q16526 586 aa18.66■□□□□ 0.58
CIITA-206ENST00000571190 EMC10Q5UCC4 262 aa18.66■□□□□ 0.58
CIITA-206ENST00000571190 NUP93Q8N1F7 819 aa18.66■□□□□ 0.58
CIITA-206ENST00000571190 CCDC26Q8TAB7 109 aa18.66■□□□□ 0.58
CIITA-206ENST00000571190 SCAMP5Q8TAC9 235 aa18.66■□□□□ 0.58
CIITA-206ENST00000571190 SYAP1Q96A49 352 aaPredicted RBP18.66■□□□□ 0.58
CIITA-206ENST00000571190 SLITRK1Q96PX8 696 aa18.66■□□□□ 0.58
CIITA-206ENST00000571190 CGNQ9P2M7 1197 aaKnown RBP18.66■□□□□ 0.58
CIITA-206ENST00000571190 CHORDC1Q9UHD1 332 aaPredicted RBP18.66■□□□□ 0.58
CIITA-206ENST00000571190 COCHO43405 550 aa18.65■□□□□ 0.58
CIITA-206ENST00000571190 RHOBTB1O94844 696 aa18.65■□□□□ 0.58
CIITA-206ENST00000571190 CAVIN2O95810 425 aa18.65■□□□□ 0.58
CIITA-206ENST00000571190 ZSCAN22P10073 491 aaPredicted RBP18.65■□□□□ 0.58
CIITA-206ENST00000571190 MBL2P11226 248 aaPredicted RBP18.65■□□□□ 0.58
CIITA-206ENST00000571190 KCNA4P22459 653 aa18.65■□□□□ 0.58
CIITA-206ENST00000571190 PMLP29590 882 aa18.65■□□□□ 0.58
CIITA-206ENST00000571190 MRPS21P82921 87 aaKnown RBP18.65■□□□□ 0.58
CIITA-206ENST00000571190 CREB5Q02930 508 aa18.65■□□□□ 0.58
CIITA-206ENST00000571190 STK4Q13043 487 aa18.65■□□□□ 0.58
CIITA-206ENST00000571190 PMS2CLQ68D20 193 aa18.65■□□□□ 0.58
CIITA-206ENST00000571190 ANO7Q6IWH7 933 aa18.65■□□□□ 0.58
CIITA-206ENST00000571190 FAM35AQ86V20 835 aa18.65■□□□□ 0.58
CIITA-206ENST00000571190 PHTF2Q8N3S3 785 aa18.65■□□□□ 0.58
CIITA-206ENST00000571190 IL17RCQ8NAC3 791 aa18.65■□□□□ 0.58
CIITA-206ENST00000571190 MDGA1Q8NFP4 955 aa18.65■□□□□ 0.58
CIITA-206ENST00000571190 SNX21Q969T3 373 aa18.65■□□□□ 0.58
CIITA-206ENST00000571190 WBP2Q969T9 261 aa18.65■□□□□ 0.58
CIITA-206ENST00000571190 CNOT6LQ96LI5 555 aaKnown RBP18.65■□□□□ 0.58
CIITA-206ENST00000571190 PNKPQ96T60 521 aa18.65■□□□□ 0.58
CIITA-206ENST00000571190 LSM14BQ9BX40 385 aaKnown RBP18.65■□□□□ 0.58
CIITA-206ENST00000571190 OBSL1O75147 1896 aa18.65■□□□□ 0.58
CIITA-206ENST00000571190 TCHHQ07283 1943 aa18.64■□□□□ 0.58
CIITA-206ENST00000571190 SLC9A3R1O14745 358 aaPredicted RBP18.64■□□□□ 0.57
CIITA-206ENST00000571190 PHACTR2O75167 634 aa18.64■□□□□ 0.57
CIITA-206ENST00000571190 F13A1P00488 732 aa18.64■□□□□ 0.57
CIITA-206ENST00000571190 ZDHHC11BP0C7U3 371 aa18.64■□□□□ 0.57
CIITA-206ENST00000571190 GBP1P32455 592 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms