RNA–Protein interactions for RNA: ENST00000570300.1

NPLOC4-203, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-203ENST00000570300 ABHD8Q96I13 439 aa11.55□□□□□ -0.56
NPLOC4-203ENST00000570300 CAPZA3Q96KX2 299 aa11.55□□□□□ -0.56
NPLOC4-203ENST00000570300 RNPC3Q96LT9 517 aaKnown RBP11.55□□□□□ -0.56
NPLOC4-203ENST00000570300 CEP295NLQ96MC4 621 aa11.55□□□□□ -0.56
NPLOC4-203ENST00000570300 PSMB7Q99436 277 aa11.55□□□□□ -0.56
NPLOC4-203ENST00000570300 GPR62Q9BZJ7 368 aa11.55□□□□□ -0.56
NPLOC4-203ENST00000570300 DMAP1Q9NPF5 467 aaPredicted RBP11.55□□□□□ -0.56
NPLOC4-203ENST00000570300 KRT82Q9NSB4 513 aa11.55□□□□□ -0.56
NPLOC4-203ENST00000570300 TMEM51Q9NW97 253 aa11.55□□□□□ -0.56
NPLOC4-203ENST00000570300 BACE2Q9Y5Z0 518 aa11.55□□□□□ -0.56
NPLOC4-203ENST00000570300 PATJQ8NI35 1801 aa11.55□□□□□ -0.56
NPLOC4-203ENST00000570300 ALPK3Q96L96 1907 aa11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 TARSL2A2RTX5 802 aaKnown RBP11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 TMEM110-MUSTN1A8MSY1 372 aa11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 F8VP50 259 aa11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 CLDN5O00501 218 aa11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 FSCN2O14926 492 aa11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 HSF2BPO75031 334 aa11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 LRCH4O75427 683 aa11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 GJB6O95452 261 aa11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 KRT7P08729 469 aa11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 GPD1P21695 349 aa11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 PSMA2P25787 234 aa11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 MARCKSL1P49006 195 aa11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 COPS2P61201 443 aa11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 MRPS5P82675 430 aaKnown RBP11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 HTRA4P83105 476 aaPredicted RBP11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 TAZQ16635 292 aa11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 HADHQ16836 314 aaKnown RBP11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 FAM171A1Q5VUB5 890 aa11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 ZNF280DQ6N043 979 aa11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 ANKS3Q6ZW76 656 aa11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 C16orf59Q7L2K0 433 aa11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 BNIPLQ7Z465 357 aa11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 PHLDB2Q86SQ0 1253 aa11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 VSIG1Q86XK7 387 aa11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 SCUBE3Q8IX30 993 aa11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 NT5C3BQ969T7 300 aa11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 IGSF21Q96ID5 467 aa11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 MS4A14Q96JA4 679 aa11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 TBCBQ99426 244 aa11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 MED10Q9BTT4 135 aa11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 TTPALQ9BTX7 342 aa11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 DDX23Q9BUQ8 820 aaKnown RBP11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 LRRC4Q9HBW1 653 aa11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 PRDM5Q9NQX1 630 aaPredicted RBP11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 METTL5Q9NRN9 209 aaKnown RBP11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 CHST7Q9NS84 486 aa11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 TMLHEQ9NVH6 421 aa11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 DDX56Q9NY93 547 aaKnown RBP11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 RRN3Q9NYV6 651 aa11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 EFR3BQ9Y2G0 817 aa11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 USP3Q9Y6I4 520 aa11.54□□□□□ -0.56
NPLOC4-203ENST00000570300 FAM170AA1A519 330 aa11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 RNF8O76064 485 aa11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 BEST1O76090 585 aa11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 ENDOD1O94919 500 aa11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 ZRANB2O95218 330 aaKnown RBP eCLIP11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 PYGMP11217 842 aa11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 PDGFRAP16234 1089 aa11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 DESP17661 470 aa11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 LAG3P18627 525 aa11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 FLT3P36888 993 aa11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 MATKP42679 507 aa11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 TAS2R40P59535 323 aa11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 SLC25A11Q02978 314 aaKnown RBP11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 FPGSQ05932 587 aa11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 GPR17Q13304 367 aa11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 CCDC142Q17RM4 750 aa11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 ERCC6LQ2NKX8 1250 aa11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 USP41Q3LFD5 358 aa11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 SEL1L2Q5TEA6 688 aa11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 SLC8B1Q6J4K2 584 aa11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 TRNP1Q6NT89 227 aa11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 PSRC1Q6PGN9 363 aaPredicted RBP11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 KCNT2Q6UVM3 1135 aa11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 STRADAQ7RTN6 431 aa11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 CPNE8Q86YQ8 564 aa11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 SLC13A5Q86YT5 568 aaPredicted RBP11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 RCOR2Q8IZ40 523 aa11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 SLC39A11Q8N1S5 342 aa11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 ARFGAP1Q8N6T3 406 aa11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 NOA1Q8NC60 698 aaKnown RBP11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 CMASQ8NFW8 434 aaPredicted RBP11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 TEKT4Q8WW24 435 aa11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 MAIP1Q8WWC4 291 aa11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 RXFP2Q8WXD0 754 aa11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 PIK3R5Q8WYR1 880 aa11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 RBM41Q96IZ5 413 aaKnown RBP11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 PIWIL1Q96J94 861 aaKnown RBP11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 C8orf48Q96LL4 319 aa11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 SLC2A13Q96QE2 648 aa11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 TRIM62Q9BVG3 475 aa11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 TMEM30AQ9NV96 361 aa11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 IL37Q9NZH6 218 aa11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 HSFX1Q9UBD0 423 aa11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 PRKAG2Q9UGJ0 569 aa11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 TNRC18O15417 2968 aaPredicted RBP11.53□□□□□ -0.56
NPLOC4-203ENST00000570300 ZNF487B1APH4 448 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms