RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 SIX2Q9NPC8 291 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 FBXO28Q9NVF7 368 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 H2AFY2Q9P0M6 372 aaPredicted RBP8.45□□□□□ -1.06
TCF4-246ENST00000570287 GCNT4Q9P109 453 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 VPS9D1Q9Y2B5 631 aa8.45□□□□□ -1.06
TCF4-246ENST00000570287 FCF1Q9Y324 198 aaKnown RBP8.45□□□□□ -1.06
TCF4-246ENST00000570287 RPTORQ8N122 1335 aa8.44□□□□□ -1.06
TCF4-246ENST00000570287 DPPA5A6NC42 116 aa8.44□□□□□ -1.06
TCF4-246ENST00000570287 CLTAP09496 248 aa8.44□□□□□ -1.06
TCF4-246ENST00000570287 ATP2A2P16615 1042 aaKnown RBP8.44□□□□□ -1.06
TCF4-246ENST00000570287 KCNA3P22001 575 aa8.44□□□□□ -1.06
TCF4-246ENST00000570287 CDC25CP30307 473 aa8.44□□□□□ -1.06
TCF4-246ENST00000570287 NCALDP61601 193 aa8.44□□□□□ -1.06
TCF4-246ENST00000570287 MRPS35P82673 323 aaKnown RBP8.44□□□□□ -1.06
TCF4-246ENST00000570287 PPP1R26Q5T8A7 1209 aaPredicted RBP8.44□□□□□ -1.06
TCF4-246ENST00000570287 ZNF449Q6P9G9 518 aa8.44□□□□□ -1.06
TCF4-246ENST00000570287 PACS1Q6VY07 963 aa8.44□□□□□ -1.06
TCF4-246ENST00000570287 SLC30A10Q6XR72 485 aa8.44□□□□□ -1.06
TCF4-246ENST00000570287 TRPM8Q7Z2W7 1104 aa8.44□□□□□ -1.06
TCF4-246ENST00000570287 ARHGAP22Q7Z5H3 698 aa8.44□□□□□ -1.06
TCF4-246ENST00000570287 CPLX4Q7Z7G2 160 aa8.44□□□□□ -1.06
TCF4-246ENST00000570287 VPS36Q86VN1 386 aa8.44□□□□□ -1.06
TCF4-246ENST00000570287 CLRN3Q8NCR9 226 aa8.44□□□□□ -1.06
TCF4-246ENST00000570287 LRRC45Q96CN5 670 aa8.44□□□□□ -1.06
TCF4-246ENST00000570287 NAF1Q96HR8 494 aaKnown RBP8.44□□□□□ -1.06
TCF4-246ENST00000570287 INPP4AQ96PE3 977 aaPredicted RBP8.44□□□□□ -1.06
TCF4-246ENST00000570287 LXNQ9BS40 222 aa8.44□□□□□ -1.06
TCF4-246ENST00000570287 KIAA1586Q9HCI6 787 aa8.44□□□□□ -1.06
TCF4-246ENST00000570287 DMAC2Q9NW81 257 aa8.44□□□□□ -1.06
TCF4-246ENST00000570287 CTNNAL1Q9UBT7 734 aa8.44□□□□□ -1.06
TCF4-246ENST00000570287 CCPG1Q9ULG6 757 aa8.44□□□□□ -1.06
TCF4-246ENST00000570287 ARHGEF35A5YM69 484 aa8.44□□□□□ -1.06
TCF4-246ENST00000570287 KPNA5O15131 536 aa8.44□□□□□ -1.06
TCF4-246ENST00000570287 WDR46O15213 610 aaKnown RBP8.44□□□□□ -1.06
TCF4-246ENST00000570287 PRODHO43272 600 aa8.44□□□□□ -1.06
TCF4-246ENST00000570287 FLOT1O75955 427 aa8.44□□□□□ -1.06
TCF4-246ENST00000570287 CXCR5P32302 372 aa8.44□□□□□ -1.06
TCF4-246ENST00000570287 ROR1Q01973 937 aa8.44□□□□□ -1.06
TCF4-246ENST00000570287 TNIP1Q15025 636 aa8.44□□□□□ -1.06
TCF4-246ENST00000570287 ZC2HC1CQ53FD0 456 aaPredicted RBP8.44□□□□□ -1.06
TCF4-246ENST00000570287 OVOS1Q6IE37 1185 aa8.44□□□□□ -1.06
TCF4-246ENST00000570287 ANO7Q6IWH7 933 aa8.44□□□□□ -1.06
TCF4-246ENST00000570287 ERICH1Q86X53 443 aa8.44□□□□□ -1.06
TCF4-246ENST00000570287 ARL10Q8N8L6 244 aa8.44□□□□□ -1.06
TCF4-246ENST00000570287 B4GALNT2Q8NHY0 566 aa8.44□□□□□ -1.06
TCF4-246ENST00000570287 IFT81Q8WYA0 676 aa8.44□□□□□ -1.06
TCF4-246ENST00000570287 SEC14L1Q92503 715 aa8.44□□□□□ -1.06
TCF4-246ENST00000570287 LPAR1Q92633 364 aa8.44□□□□□ -1.06
TCF4-246ENST00000570287 RBM41Q96IZ5 413 aaKnown RBP8.44□□□□□ -1.06
TCF4-246ENST00000570287 UBXN10Q96LJ8 280 aa8.44□□□□□ -1.06
TCF4-246ENST00000570287 GLIS2Q9BZE0 524 aaPredicted RBP8.44□□□□□ -1.06
TCF4-246ENST00000570287 UNKQ9C0B0 810 aaKnown RBP8.44□□□□□ -1.06
TCF4-246ENST00000570287 WRAP73Q9P2S5 460 aaPredicted RBP8.44□□□□□ -1.06
TCF4-246ENST00000570287 ZNF536O15090 1300 aa8.44□□□□□ -1.06
TCF4-246ENST00000570287 WNT10BO00744 389 aa8.43□□□□□ -1.06
TCF4-246ENST00000570287 MTHFD1P11586 935 aaKnown RBP8.43□□□□□ -1.06
TCF4-246ENST00000570287 DPEP1P16444 411 aa8.43□□□□□ -1.06
TCF4-246ENST00000570287 ALDH3A1P30838 453 aa8.43□□□□□ -1.06
TCF4-246ENST00000570287 TAF5Q15542 800 aa8.43□□□□□ -1.06
TCF4-246ENST00000570287 TRADDQ15628 312 aa8.43□□□□□ -1.06
TCF4-246ENST00000570287 NUGGCQ68CJ6 796 aa8.43□□□□□ -1.06
TCF4-246ENST00000570287 AHCYL2Q96HN2 611 aaKnown RBP8.43□□□□□ -1.06
TCF4-246ENST00000570287 PSMB7Q99436 277 aa8.43□□□□□ -1.06
TCF4-246ENST00000570287 STRA6Q9BX79 667 aa8.43□□□□□ -1.06
TCF4-246ENST00000570287 PACSIN1Q9BY11 444 aa8.43□□□□□ -1.06
TCF4-246ENST00000570287 AGPAT3Q9NRZ7 376 aa8.43□□□□□ -1.06
TCF4-246ENST00000570287 GIMAP2Q9UG22 337 aa8.43□□□□□ -1.06
TCF4-246ENST00000570287 NAGPAQ9UK23 515 aa8.43□□□□□ -1.06
TCF4-246ENST00000570287 NENFQ9UMX5 172 aa8.43□□□□□ -1.06
TCF4-246ENST00000570287 GOLGA6L10A0A0M3HER8 536 aa8.43□□□□□ -1.06
TCF4-246ENST00000570287 DCDC2CA8MYV0 355 aa8.43□□□□□ -1.06
TCF4-246ENST00000570287 MAPTP10636 758 aaKnown RBP8.43□□□□□ -1.06
TCF4-246ENST00000570287 SELPP16109 830 aa8.43□□□□□ -1.06
TCF4-246ENST00000570287 ITGB5P18084 799 aa8.43□□□□□ -1.06
TCF4-246ENST00000570287 STAT1P42224 750 aa8.43□□□□□ -1.06
TCF4-246ENST00000570287 KCNJ2P63252 427 aa8.43□□□□□ -1.06
TCF4-246ENST00000570287 SFSWAPQ12872 951 aaKnown RBP8.43□□□□□ -1.06
TCF4-246ENST00000570287 ALCAMQ13740 583 aa8.43□□□□□ -1.06
TCF4-246ENST00000570287 ANO4Q32M45 955 aa8.43□□□□□ -1.06
TCF4-246ENST00000570287 GNPTABQ3T906 1256 aa8.43□□□□□ -1.06
TCF4-246ENST00000570287 ALKBH5Q6P6C2 394 aaKnown RBP8.43□□□□□ -1.06
TCF4-246ENST00000570287 MIER3Q7Z3K6 550 aa8.43□□□□□ -1.06
TCF4-246ENST00000570287 CLEC4DQ8WXI8 215 aa8.43□□□□□ -1.06
TCF4-246ENST00000570287 DTNBP1Q96EV8 351 aa8.43□□□□□ -1.06
TCF4-246ENST00000570287 MS4A14Q96JA4 679 aa8.43□□□□□ -1.06
TCF4-246ENST00000570287 PPM1MQ96MI6 270 aa8.43□□□□□ -1.06
TCF4-246ENST00000570287 MRPL4Q9BYD3 311 aaKnown RBP8.43□□□□□ -1.06
TCF4-246ENST00000570287 ZNF341Q9BYN7 854 aa8.43□□□□□ -1.06
TCF4-246ENST00000570287 VPS11Q9H270 941 aa8.43□□□□□ -1.06
TCF4-246ENST00000570287 EMC7Q9NPA0 242 aa8.43□□□□□ -1.06
TCF4-246ENST00000570287 QPCTLQ9NXS2 382 aa8.43□□□□□ -1.06
TCF4-246ENST00000570287 ADAM22Q9P0K1 906 aa8.43□□□□□ -1.06
TCF4-246ENST00000570287 GIT1Q9Y2X7 761 aa8.43□□□□□ -1.06
TCF4-246ENST00000570287 MYH11P35749 1972 aa8.43□□□□□ -1.06
TCF4-246ENST00000570287 TRAV20A0A0B4J274 112 aa8.43□□□□□ -1.06
TCF4-246ENST00000570287 RAD51CO43502 376 aa8.43□□□□□ -1.06
TCF4-246ENST00000570287 CTNNA1P35221 906 aaKnown RBP8.43□□□□□ -1.06
TCF4-246ENST00000570287 MMP13P45452 471 aa8.43□□□□□ -1.06
TCF4-246ENST00000570287 FMO5P49326 533 aa8.43□□□□□ -1.06
TCF4-246ENST00000570287 CXCL9Q07325 125 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms