RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 ADCY1Q08828 1119 aa11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 CCDC14Q49A88 953 aa11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 TMEM173Q86WV6 379 aaPredicted RBP11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 NPAS4Q8IUM7 802 aa11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 NAP1L3Q99457 506 aaPredicted RBP11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 ACBD6Q9BR61 282 aa11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 PCDHB8Q9UN66 801 aa11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 LTBP2Q14767 1821 aa11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 CCDC151A5D8V7 595 aa11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 NT5C1B-RDH14C9J2C7 533 aa11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 TMEM189-UBE2V1I3L0A0 370 aa11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 NRP1O14786 923 aa11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 MIPP30301 263 aa11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 SLC11A1P49279 550 aa11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 ZFYVE27Q5T4F4 411 aa11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 TTC27Q6P3X3 843 aa11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 FAM171BQ6P995 826 aa11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 TMCO2Q7Z6W1 182 aaPredicted RBP11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 ARGLU1Q9NWB6 273 aaPredicted RBP11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 MARCH5Q9NX47 278 aa11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 DSEQ9UL01 958 aa11.48□□□□□ -0.57
PDXDC1-216ENST00000569715 TTI1O43156 1089 aa11.47□□□□□ -0.57
PDXDC1-216ENST00000569715 HSPA1AP0DMV8 641 aaKnown RBP11.47□□□□□ -0.57
PDXDC1-216ENST00000569715 HSPA1BP0DMV9 641 aaKnown RBP11.47□□□□□ -0.57
PDXDC1-216ENST00000569715 CCDC70Q6NSX1 233 aa11.47□□□□□ -0.57
PDXDC1-216ENST00000569715 MFSD7Q6UXD7 560 aa11.47□□□□□ -0.57
PDXDC1-216ENST00000569715 CYP4V2Q6ZWL3 525 aaPredicted RBP11.47□□□□□ -0.57
PDXDC1-216ENST00000569715 EXD1Q8NHP7 514 aa11.47□□□□□ -0.57
PDXDC1-216ENST00000569715 HSFY1Q96LI6 401 aa11.47□□□□□ -0.57
PDXDC1-216ENST00000569715 SLITRK1Q96PX8 696 aa11.47□□□□□ -0.57
PDXDC1-216ENST00000569715 R3HDM2Q9Y2K5 976 aaKnown RBP11.47□□□□□ -0.57
PDXDC1-216ENST00000569715 TRIM43BA6NCK2 446 aa11.47□□□□□ -0.57
PDXDC1-216ENST00000569715 FSCN2O14926 492 aa11.47□□□□□ -0.57
PDXDC1-216ENST00000569715 ZRANB2O95218 330 aaKnown RBP eCLIP11.47□□□□□ -0.57
PDXDC1-216ENST00000569715 KRT10P13645 584 aa11.47□□□□□ -0.57
PDXDC1-216ENST00000569715 TYMPP19971 482 aa11.47□□□□□ -0.57
PDXDC1-216ENST00000569715 BDNFP23560 247 aa11.47□□□□□ -0.57
PDXDC1-216ENST00000569715 GUCY2DQ02846 1103 aa11.47□□□□□ -0.57
PDXDC1-216ENST00000569715 YWHAHQ04917 246 aaPredicted RBP11.47□□□□□ -0.57
PDXDC1-216ENST00000569715 BRD3Q15059 726 aa11.47□□□□□ -0.57
PDXDC1-216ENST00000569715 LRRC38Q5VT99 294 aa11.47□□□□□ -0.57
PDXDC1-216ENST00000569715 ATG4AQ8WYN0 398 aa11.47□□□□□ -0.57
PDXDC1-216ENST00000569715 TRIM43Q96BQ3 446 aaPredicted RBP11.47□□□□□ -0.57
PDXDC1-216ENST00000569715 FAM118BQ9BPY3 351 aa11.47□□□□□ -0.57
PDXDC1-216ENST00000569715 CNPY3Q9BT09 278 aa11.47□□□□□ -0.57
PDXDC1-216ENST00000569715 GPR62Q9BZJ7 368 aa11.47□□□□□ -0.57
PDXDC1-216ENST00000569715 PRDM5Q9NQX1 630 aaPredicted RBP11.47□□□□□ -0.57
PDXDC1-216ENST00000569715 LCMT1Q9UIC8 334 aa11.47□□□□□ -0.57
PDXDC1-216ENST00000569715 PATJQ8NI35 1801 aa11.47□□□□□ -0.57
PDXDC1-216ENST00000569715 GOLGA6L10A0A0M3HER8 536 aa11.47□□□□□ -0.57
PDXDC1-216ENST00000569715 PHF2O75151 1096 aa11.47□□□□□ -0.57
PDXDC1-216ENST00000569715 SMC1AQ14683 1233 aaKnown RBP11.47□□□□□ -0.57
PDXDC1-216ENST00000569715 GLE1Q53GS7 698 aaKnown RBP11.47□□□□□ -0.57
PDXDC1-216ENST00000569715 SLC26A9Q7LBE3 791 aa11.47□□□□□ -0.57
PDXDC1-216ENST00000569715 ANKLE1Q8NAG6 615 aa11.47□□□□□ -0.57
PDXDC1-216ENST00000569715 BCL7CQ8WUZ0 217 aaPredicted RBP11.47□□□□□ -0.57
PDXDC1-216ENST00000569715 C1orf54Q8WWF1 131 aa11.47□□□□□ -0.57
PDXDC1-216ENST00000569715 TRIM51Q9BSJ1 452 aa11.47□□□□□ -0.57
PDXDC1-216ENST00000569715 CYLDQ9NQC7 956 aa11.47□□□□□ -0.57
PDXDC1-216ENST00000569715 LRRD1A4D1F6 860 aa11.46□□□□□ -0.57
PDXDC1-216ENST00000569715 HHLA1C9JL84 531 aa11.46□□□□□ -0.57
PDXDC1-216ENST00000569715 TADA2AO75478 443 aa11.46□□□□□ -0.57
PDXDC1-216ENST00000569715 ACADSBP45954 432 aa11.46□□□□□ -0.57
PDXDC1-216ENST00000569715 ATXN1P54253 815 aaKnown RBP11.46□□□□□ -0.57
PDXDC1-216ENST00000569715 KLF1Q13351 362 aaPredicted RBP11.46□□□□□ -0.57
PDXDC1-216ENST00000569715 ZDHHC17Q8IUH5 632 aa11.46□□□□□ -0.57
PDXDC1-216ENST00000569715 SPATA18Q8TC71 538 aa11.46□□□□□ -0.57
PDXDC1-216ENST00000569715 SMARCD1Q96GM5 515 aa11.46□□□□□ -0.57
PDXDC1-216ENST00000569715 OSBPL8Q9BZF1 889 aa11.46□□□□□ -0.57
PDXDC1-216ENST00000569715 EPB41L5Q9HCM4 733 aa11.46□□□□□ -0.57
PDXDC1-216ENST00000569715 ADAM28Q9UKQ2 775 aa11.46□□□□□ -0.57
PDXDC1-216ENST00000569715 USP18Q9UMW8 372 aa11.46□□□□□ -0.57
PDXDC1-216ENST00000569715 C3orf70A6NLC5 250 aaPredicted RBP11.46□□□□□ -0.57
PDXDC1-216ENST00000569715 DPYSL4O14531 572 aa11.46□□□□□ -0.57
PDXDC1-216ENST00000569715 CD48P09326 243 aa11.46□□□□□ -0.57
PDXDC1-216ENST00000569715 TKTL1P51854 596 aa11.46□□□□□ -0.57
PDXDC1-216ENST00000569715 SLC8A3P57103 927 aa11.46□□□□□ -0.57
PDXDC1-216ENST00000569715 PKN2Q16513 984 aaKnown RBP11.46□□□□□ -0.57
PDXDC1-216ENST00000569715 KAZNQ674X7 775 aa11.46□□□□□ -0.57
PDXDC1-216ENST00000569715 TMCO3Q6UWJ1 677 aa11.46□□□□□ -0.57
PDXDC1-216ENST00000569715 HFE2Q6ZVN8 426 aa11.46□□□□□ -0.57
PDXDC1-216ENST00000569715 FAM172AQ8WUF8 416 aa11.46□□□□□ -0.57
PDXDC1-216ENST00000569715 CASKIN2Q8WXE0 1202 aa11.46□□□□□ -0.57
PDXDC1-216ENST00000569715 KCTD13Q8WZ19 329 aa11.46□□□□□ -0.57
PDXDC1-216ENST00000569715 GDAP1L1Q96MZ0 367 aa11.46□□□□□ -0.57
PDXDC1-216ENST00000569715 PLVAPQ9BX97 442 aa11.46□□□□□ -0.57
PDXDC1-216ENST00000569715 SLITRK6Q9H5Y7 841 aa11.46□□□□□ -0.57
PDXDC1-216ENST00000569715 NGRNQ9NPE2 291 aaKnown RBP11.46□□□□□ -0.57
PDXDC1-216ENST00000569715 CHST7Q9NS84 486 aa11.46□□□□□ -0.57
PDXDC1-216ENST00000569715 ASNSD1Q9NWL6 643 aa11.46□□□□□ -0.57
PDXDC1-216ENST00000569715 CALCOCO1Q9P1Z2 691 aa11.46□□□□□ -0.57
PDXDC1-216ENST00000569715 PARNO95453 639 aaKnown RBP11.46□□□□□ -0.58
PDXDC1-216ENST00000569715 TRUB2O95900 331 aaKnown RBP11.46□□□□□ -0.58
PDXDC1-216ENST00000569715 CSF2RAP15509 400 aa11.46□□□□□ -0.58
PDXDC1-216ENST00000569715 SDC4P31431 198 aa11.46□□□□□ -0.58
PDXDC1-216ENST00000569715 KCNJ1P48048 391 aa11.46□□□□□ -0.58
PDXDC1-216ENST00000569715 BEND6Q5SZJ8 279 aaPredicted RBP11.46□□□□□ -0.58
PDXDC1-216ENST00000569715 CCNI2Q6ZMN8 369 aaPredicted RBP11.46□□□□□ -0.58
PDXDC1-216ENST00000569715 SPOCD1Q6ZMY3 1216 aa11.46□□□□□ -0.58
PDXDC1-216ENST00000569715 POLNQ7Z5Q5 900 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms