RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 RNF225M0QZC1 329 aaPredicted RBP13.53□□□□□ -0.24
CDT1-203ENST00000569140 THAP12O43422 761 aa13.53□□□□□ -0.24
CDT1-203ENST00000569140 FCARP24071 287 aa13.53□□□□□ -0.24
CDT1-203ENST00000569140 KLK7P49862 253 aa13.53□□□□□ -0.24
CDT1-203ENST00000569140 BST2Q10589 180 aaKnown RBP13.53□□□□□ -0.24
CDT1-203ENST00000569140 LUZP1Q86V48 1076 aa13.53□□□□□ -0.24
CDT1-203ENST00000569140 CMTM8Q8IZV2 173 aa13.53□□□□□ -0.24
CDT1-203ENST00000569140 ARL14EPQ8N8R7 260 aaPredicted RBP13.53□□□□□ -0.24
CDT1-203ENST00000569140 ANKRD52Q8NB46 1076 aa13.53□□□□□ -0.24
CDT1-203ENST00000569140 PDZD8Q8NEN9 1154 aa13.53□□□□□ -0.24
CDT1-203ENST00000569140 TFAP2BQ92481 460 aa13.53□□□□□ -0.24
CDT1-203ENST00000569140 ELSPBP1Q96BH3 223 aa13.53□□□□□ -0.24
CDT1-203ENST00000569140 TTLL2Q9BWV7 592 aa13.53□□□□□ -0.24
CDT1-203ENST00000569140 PLA2G2FQ9BZM2 168 aa13.53□□□□□ -0.24
CDT1-203ENST00000569140 MFSD1Q9H3U5 465 aa13.53□□□□□ -0.24
CDT1-203ENST00000569140 FBXO44Q9H4M3 255 aa13.53□□□□□ -0.24
CDT1-203ENST00000569140 CBX8Q9HC52 389 aa13.53□□□□□ -0.24
CDT1-203ENST00000569140 CSNK1G1Q9HCP0 422 aa13.53□□□□□ -0.24
CDT1-203ENST00000569140 SIX2Q9NPC8 291 aa13.53□□□□□ -0.24
CDT1-203ENST00000569140 FAM207AQ9NSI2 230 aaPredicted RBP13.53□□□□□ -0.24
CDT1-203ENST00000569140 CHORDC1Q9UHD1 332 aaPredicted RBP13.53□□□□□ -0.24
CDT1-203ENST00000569140 AJAP1Q9UKB5 411 aaPredicted RBP13.53□□□□□ -0.24
CDT1-203ENST00000569140 KIAA1257Q9ULG3 409 aa13.53□□□□□ -0.24
CDT1-203ENST00000569140 FHOD1Q9Y613 1164 aa13.53□□□□□ -0.24
CDT1-203ENST00000569140 O00370 1275 aa13.52□□□□□ -0.25
CDT1-203ENST00000569140 TNFRSF10BO14763 440 aa13.52□□□□□ -0.25
CDT1-203ENST00000569140 CYP26A1O43174 497 aa13.52□□□□□ -0.25
CDT1-203ENST00000569140 MED7O43513 233 aa13.52□□□□□ -0.25
CDT1-203ENST00000569140 PRAMEF12O95522 483 aa13.52□□□□□ -0.25
CDT1-203ENST00000569140 SERPINC1P01008 464 aa13.52□□□□□ -0.25
CDT1-203ENST00000569140 USP17L7P0C7H9 530 aa13.52□□□□□ -0.25
CDT1-203ENST00000569140 PNMA6AP0CW24 399 aaPredicted RBP13.52□□□□□ -0.25
CDT1-203ENST00000569140 SRFP11831 508 aa13.52□□□□□ -0.25
CDT1-203ENST00000569140 ZNF18P17022 549 aa13.52□□□□□ -0.25
CDT1-203ENST00000569140 GNA15P30679 374 aa13.52□□□□□ -0.25
CDT1-203ENST00000569140 GDI1P31150 447 aa13.52□□□□□ -0.25
CDT1-203ENST00000569140 PPP3CCP48454 512 aa13.52□□□□□ -0.25
CDT1-203ENST00000569140 PDE6CP51160 858 aa13.52□□□□□ -0.25
CDT1-203ENST00000569140 PDE4CQ08493 712 aa13.52□□□□□ -0.25
CDT1-203ENST00000569140 SIGLEC14Q08ET2 396 aa13.52□□□□□ -0.25
CDT1-203ENST00000569140 KCNMA1Q12791 1236 aa13.52□□□□□ -0.25
CDT1-203ENST00000569140 SYCP1Q15431 976 aa13.52□□□□□ -0.25
CDT1-203ENST00000569140 FILIP1LQ4L180 1135 aa13.52□□□□□ -0.25
CDT1-203ENST00000569140 KLHDC7AQ5VTJ3 777 aa13.52□□□□□ -0.25
CDT1-203ENST00000569140 VITQ6UXI7 678 aa13.52□□□□□ -0.25
CDT1-203ENST00000569140 PIGZQ86VD9 579 aa13.52□□□□□ -0.25
CDT1-203ENST00000569140 MON1AQ86VX9 555 aa13.52□□□□□ -0.25
CDT1-203ENST00000569140 TTC30AQ86WT1 665 aa13.52□□□□□ -0.25
CDT1-203ENST00000569140 E2F7Q96AV8 911 aa13.52□□□□□ -0.25
CDT1-203ENST00000569140 CYP2S1Q96SQ9 504 aa13.52□□□□□ -0.25
CDT1-203ENST00000569140 TRMT61BQ9BVS5 477 aaKnown RBP13.52□□□□□ -0.25
CDT1-203ENST00000569140 BRD9Q9H8M2 597 aa13.52□□□□□ -0.25
CDT1-203ENST00000569140 LRRC4Q9HBW1 653 aa13.52□□□□□ -0.25
CDT1-203ENST00000569140 ZMYM5Q9UJ78 669 aa13.52□□□□□ -0.25
CDT1-203ENST00000569140 CA14Q9ULX7 337 aa13.52□□□□□ -0.25
CDT1-203ENST00000569140 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.52□□□□□ -0.25
CDT1-203ENST00000569140 PATJQ8NI35 1801 aa13.52□□□□□ -0.25
CDT1-203ENST00000569140 GREB1Q4ZG55 1949 aa13.52□□□□□ -0.25
CDT1-203ENST00000569140 VCANP13611 3396 aa13.52□□□□□ -0.25
CDT1-203ENST00000569140 NUP210Q8TEM1 1887 aaPredicted RBP13.51□□□□□ -0.25
CDT1-203ENST00000569140 ZNF840PA6NDX5 716 aa13.51□□□□□ -0.25
CDT1-203ENST00000569140 TMEM221A6NGB7 291 aa13.51□□□□□ -0.25
CDT1-203ENST00000569140 M0R296 226 aa13.51□□□□□ -0.25
CDT1-203ENST00000569140 PIK3R2O00459 728 aa13.51□□□□□ -0.25
CDT1-203ENST00000569140 STK25O00506 426 aa13.51□□□□□ -0.25
CDT1-203ENST00000569140 SETSIPP0DME0 302 aa13.51□□□□□ -0.25
CDT1-203ENST00000569140 MBL2P11226 248 aaPredicted RBP13.51□□□□□ -0.25
CDT1-203ENST00000569140 LCP1P13796 627 aa13.51□□□□□ -0.25
CDT1-203ENST00000569140 PSMC3P17980 439 aa13.51□□□□□ -0.25
CDT1-203ENST00000569140 HDCP19113 662 aa13.51□□□□□ -0.25
CDT1-203ENST00000569140 RGS7P49802 495 aa13.51□□□□□ -0.25
CDT1-203ENST00000569140 ZNF132P52740 706 aa13.51□□□□□ -0.25
CDT1-203ENST00000569140 GPC5P78333 572 aa13.51□□□□□ -0.25
CDT1-203ENST00000569140 DRAP1Q14919 205 aaPredicted RBP13.51□□□□□ -0.25
CDT1-203ENST00000569140 STILQ15468 1287 aa13.51□□□□□ -0.25
CDT1-203ENST00000569140 TRIM67Q6ZTA4 783 aa13.51□□□□□ -0.25
CDT1-203ENST00000569140 SIX6OS1Q8N1H7 587 aa13.51□□□□□ -0.25
CDT1-203ENST00000569140 CELF5Q8N6W0 485 aaKnown RBP13.51□□□□□ -0.25
CDT1-203ENST00000569140 NEK11Q8NG66 645 aa13.51□□□□□ -0.25
CDT1-203ENST00000569140 DEPDC1BQ8WUY9 529 aa13.51□□□□□ -0.25
CDT1-203ENST00000569140 SECISBP2LQ93073 1101 aaKnown RBP13.51□□□□□ -0.25
CDT1-203ENST00000569140 SLC22A12Q96S37 553 aa13.51□□□□□ -0.25
CDT1-203ENST00000569140 C1QTNF1Q9BXJ1 281 aa13.51□□□□□ -0.25
CDT1-203ENST00000569140 HSD3B7Q9H2F3 369 aa13.51□□□□□ -0.25
CDT1-203ENST00000569140 PDCL3Q9H2J4 239 aa13.51□□□□□ -0.25
CDT1-203ENST00000569140 TSPY26PQ9H489 355 aa13.51□□□□□ -0.25
CDT1-203ENST00000569140 PNPLA8Q9NP80 782 aa13.51□□□□□ -0.25
CDT1-203ENST00000569140 ACP6Q9NPH0 428 aa13.51□□□□□ -0.25
CDT1-203ENST00000569140 TLR8Q9NR97 1041 aaKnown RBP13.51□□□□□ -0.25
CDT1-203ENST00000569140 TDP1Q9NUW8 608 aa13.51□□□□□ -0.25
CDT1-203ENST00000569140 COMMD8Q9NX08 183 aa13.51□□□□□ -0.25
CDT1-203ENST00000569140 SMPD4Q9NXE4 827 aa13.51□□□□□ -0.25
CDT1-203ENST00000569140 CCL26Q9Y258 94 aa13.51□□□□□ -0.25
CDT1-203ENST00000569140 NCANO14594 1321 aa13.5□□□□□ -0.25
CDT1-203ENST00000569140 HHLA1C9JL84 531 aa13.5□□□□□ -0.25
CDT1-203ENST00000569140 TULP2O00295 520 aa13.5□□□□□ -0.25
CDT1-203ENST00000569140 ZNF263O14978 683 aa13.5□□□□□ -0.25
CDT1-203ENST00000569140 XPO1O14980 1071 aaKnown RBP13.5□□□□□ -0.25
CDT1-203ENST00000569140 UCHL3P15374 230 aa13.5□□□□□ -0.25
CDT1-203ENST00000569140 TKTL1P51854 596 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms