RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 EMC10Q5UCC4 262 aa9.29□□□□□ -0.92
SMG1-216ENST00000569122 SLFN12LQ6IEE8 588 aa9.29□□□□□ -0.92
SMG1-216ENST00000569122 RHBDF2Q6PJF5 856 aa9.29□□□□□ -0.92
SMG1-216ENST00000569122 VSTM1Q6UX27 236 aa9.29□□□□□ -0.92
SMG1-216ENST00000569122 DBX2Q6ZNG2 339 aa9.29□□□□□ -0.92
SMG1-216ENST00000569122 TMPRSS12Q86WS5 348 aa9.29□□□□□ -0.92
SMG1-216ENST00000569122 SLC41A1Q8IVJ1 513 aa9.29□□□□□ -0.92
SMG1-216ENST00000569122 SCN4BQ8IWT1 228 aa9.29□□□□□ -0.92
SMG1-216ENST00000569122 ZNF843Q8N446 348 aa9.29□□□□□ -0.92
SMG1-216ENST00000569122 CADM4Q8NFZ8 388 aa9.29□□□□□ -0.92
SMG1-216ENST00000569122 PIP4K2CQ8TBX8 421 aa9.29□□□□□ -0.92
SMG1-216ENST00000569122 DNASE2BQ8WZ79 361 aa9.29□□□□□ -0.92
SMG1-216ENST00000569122 NXPE2Q96DL1 559 aa9.29□□□□□ -0.92
SMG1-216ENST00000569122 RUSC1Q9BVN2 902 aa9.29□□□□□ -0.92
SMG1-216ENST00000569122 PRORYQ9H606 182 aa9.29□□□□□ -0.92
SMG1-216ENST00000569122 GAREM1Q9H706 876 aa9.29□□□□□ -0.92
SMG1-216ENST00000569122 TM7SF3Q9NS93 570 aa9.29□□□□□ -0.92
SMG1-216ENST00000569122 DDX43Q9NXZ2 648 aaKnown RBP9.29□□□□□ -0.92
SMG1-216ENST00000569122 CPSF3Q9UKF6 684 aaKnown RBP9.29□□□□□ -0.92
SMG1-216ENST00000569122 NOL7Q9UMY1 257 aaKnown RBP9.29□□□□□ -0.92
SMG1-216ENST00000569122 E2F8A0AVK6 867 aa9.28□□□□□ -0.92
SMG1-216ENST00000569122 MEI4A8MW99 385 aa9.28□□□□□ -0.92
SMG1-216ENST00000569122 LAD1O00515 517 aa9.28□□□□□ -0.92
SMG1-216ENST00000569122 IL18RAPO95256 599 aa9.28□□□□□ -0.92
SMG1-216ENST00000569122 CTDNEP1O95476 244 aa9.28□□□□□ -0.92
SMG1-216ENST00000569122 FDPSP14324 419 aaKnown RBP9.28□□□□□ -0.92
SMG1-216ENST00000569122 CD6P30203 668 aa9.28□□□□□ -0.92
SMG1-216ENST00000569122 OXTRP30559 389 aa9.28□□□□□ -0.92
SMG1-216ENST00000569122 HNF1BP35680 557 aa9.28□□□□□ -0.92
SMG1-216ENST00000569122 CDR1P51861 262 aa9.28□□□□□ -0.92
SMG1-216ENST00000569122 ZNF132P52740 706 aa9.28□□□□□ -0.92
SMG1-216ENST00000569122 NCKAP1LP55160 1127 aa9.28□□□□□ -0.92
SMG1-216ENST00000569122 CFHR1Q03591 330 aa9.28□□□□□ -0.92
SMG1-216ENST00000569122 CAMK2BQ13554 666 aa9.28□□□□□ -0.92
SMG1-216ENST00000569122 GNL2Q13823 731 aaKnown RBP9.28□□□□□ -0.92
SMG1-216ENST00000569122 GAB4Q2WGN9 574 aa9.28□□□□□ -0.92
SMG1-216ENST00000569122 ZC2HC1CQ53FD0 456 aaPredicted RBP9.28□□□□□ -0.92
SMG1-216ENST00000569122 TTC38Q5R3I4 469 aa9.28□□□□□ -0.92
SMG1-216ENST00000569122 SDHAF4Q5VUM1 108 aa9.28□□□□□ -0.92
SMG1-216ENST00000569122 DENND5BQ6ZUT9 1274 aa9.28□□□□□ -0.92
SMG1-216ENST00000569122 GPR155Q7Z3F1 870 aa9.28□□□□□ -0.92
SMG1-216ENST00000569122 METTL3Q86U44 580 aaKnown RBP9.28□□□□□ -0.92
SMG1-216ENST00000569122 CHPFQ8IZ52 775 aa9.28□□□□□ -0.92
SMG1-216ENST00000569122 IGSF22Q8N9C0 903 aa9.28□□□□□ -0.92
SMG1-216ENST00000569122 IPO4Q8TEX9 1081 aaKnown RBP9.28□□□□□ -0.92
SMG1-216ENST00000569122 CACTINQ8WUQ7 758 aaKnown RBP9.28□□□□□ -0.92
SMG1-216ENST00000569122 WBP1Q96G27 269 aa9.28□□□□□ -0.92
SMG1-216ENST00000569122 HAPLN2Q9GZV7 340 aa9.28□□□□□ -0.92
SMG1-216ENST00000569122 FOXP1Q9H334 677 aaPredicted RBP9.28□□□□□ -0.92
SMG1-216ENST00000569122 PRDM16Q9HAZ2 1276 aa9.28□□□□□ -0.92
SMG1-216ENST00000569122 TMLHEQ9NVH6 421 aa9.28□□□□□ -0.92
SMG1-216ENST00000569122 MAGEC2Q9UBF1 373 aaPredicted RBP9.28□□□□□ -0.92
SMG1-216ENST00000569122 CYP8B1Q9UNU6 501 aa9.28□□□□□ -0.92
SMG1-216ENST00000569122 R3HCC1Q9Y3T6 440 aaKnown RBP9.28□□□□□ -0.92
SMG1-216ENST00000569122 THADAQ6YHU6 1953 aa9.28□□□□□ -0.92
SMG1-216ENST00000569122 NUP205Q92621 2012 aa9.27□□□□□ -0.92
SMG1-216ENST00000569122 ZNF840PA6NDX5 716 aa9.27□□□□□ -0.93
SMG1-216ENST00000569122 GFRA2O00451 464 aa9.27□□□□□ -0.93
SMG1-216ENST00000569122 TRIM66O15016 1216 aa9.27□□□□□ -0.93
SMG1-216ENST00000569122 BCAT2O15382 392 aaPredicted RBP9.27□□□□□ -0.93
SMG1-216ENST00000569122 HOXC11O43248 304 aaPredicted RBP9.27□□□□□ -0.93
SMG1-216ENST00000569122 KALRNO60229 2985 aa9.27□□□□□ -0.93
SMG1-216ENST00000569122 FAM189A1O60320 539 aa9.27□□□□□ -0.93
SMG1-216ENST00000569122 CILPO75339 1184 aa9.27□□□□□ -0.93
SMG1-216ENST00000569122 ATXN1LP0C7T5 689 aaKnown RBP9.27□□□□□ -0.93
SMG1-216ENST00000569122 CHRM1P11229 460 aaPredicted RBP9.27□□□□□ -0.93
SMG1-216ENST00000569122 GRIK1P39086 918 aa9.27□□□□□ -0.93
SMG1-216ENST00000569122 EIF2S3P41091 472 aaKnown RBP9.27□□□□□ -0.93
SMG1-216ENST00000569122 GRK6P43250 576 aa9.27□□□□□ -0.93
SMG1-216ENST00000569122 KCNC4Q03721 635 aa9.27□□□□□ -0.93
SMG1-216ENST00000569122 KDSRQ06136 332 aa9.27□□□□□ -0.93
SMG1-216ENST00000569122 POSTNQ15063 836 aa9.27□□□□□ -0.93
SMG1-216ENST00000569122 C10orf76Q5T2E6 689 aa9.27□□□□□ -0.93
SMG1-216ENST00000569122 LARP1BQ659C4 914 aaKnown RBP9.27□□□□□ -0.93
SMG1-216ENST00000569122 CENPQQ7L2Z9 268 aaPredicted RBP9.27□□□□□ -0.93
SMG1-216ENST00000569122 TMEM130Q8N3G9 435 aa9.27□□□□□ -0.93
SMG1-216ENST00000569122 PDCL2Q8N4E4 241 aa9.27□□□□□ -0.93
SMG1-216ENST00000569122 SYT2Q8N9I0 419 aaPredicted RBP9.27□□□□□ -0.93
SMG1-216ENST00000569122 TERB1Q8NA31 727 aa9.27□□□□□ -0.93
SMG1-216ENST00000569122 STKLD1Q8NE28 680 aa9.27□□□□□ -0.93
SMG1-216ENST00000569122 BAHD1Q8TBE0 780 aaPredicted RBP9.27□□□□□ -0.93
SMG1-216ENST00000569122 SCFD1Q8WVM8 642 aa9.27□□□□□ -0.93
SMG1-216ENST00000569122 FCRL3Q96P31 734 aaPredicted RBP9.27□□□□□ -0.93
SMG1-216ENST00000569122 SLITRK1Q96PX8 696 aa9.27□□□□□ -0.93
SMG1-216ENST00000569122 XPO6Q96QU8 1125 aaKnown RBP9.27□□□□□ -0.93
SMG1-216ENST00000569122 DUSP9Q99956 384 aaKnown RBP9.27□□□□□ -0.93
SMG1-216ENST00000569122 CLMPQ9H6B4 373 aa9.27□□□□□ -0.93
SMG1-216ENST00000569122 GTF3C4Q9UKN8 822 aa9.27□□□□□ -0.93
SMG1-216ENST00000569122 ODF2LQ9ULJ1 636 aa9.27□□□□□ -0.93
SMG1-216ENST00000569122 CPQQ9Y646 472 aa9.27□□□□□ -0.93
SMG1-216ENST00000569122 EML5Q05BV3 1969 aa9.26□□□□□ -0.93
SMG1-216ENST00000569122 GON4LQ3T8J9 2241 aa9.26□□□□□ -0.93
SMG1-216ENST00000569122 A0A1W2PQF6 199 aa9.26□□□□□ -0.93
SMG1-216ENST00000569122 ERVH48-1M5A8F1 160 aa9.26□□□□□ -0.93
SMG1-216ENST00000569122 NPC1O15118 1278 aa9.26□□□□□ -0.93
SMG1-216ENST00000569122 DFNA5O60443 496 aa9.26□□□□□ -0.93
SMG1-216ENST00000569122 TULP3O75386 442 aa9.26□□□□□ -0.93
SMG1-216ENST00000569122 OLFM2O95897 454 aa9.26□□□□□ -0.93
SMG1-216ENST00000569122 ABL1P00519 1130 aa9.26□□□□□ -0.93
SMG1-216ENST00000569122 C1SP09871 688 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms