RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 SIM1P81133 766 aaPredicted RBP15.88■□□□□ 0.13
USB1-214ENST00000568848 CFAP221Q4G0U5 840 aa15.88■□□□□ 0.13
USB1-214ENST00000568848 L1TD1Q5T7N2 865 aaKnown RBP15.88■□□□□ 0.13
USB1-214ENST00000568848 RHBDF2Q6PJF5 856 aa15.88■□□□□ 0.13
USB1-214ENST00000568848 MIB1Q86YT6 1006 aa15.88■□□□□ 0.13
USB1-214ENST00000568848 CBWD2Q8IUF1 395 aa15.88■□□□□ 0.13
USB1-214ENST00000568848 PGBD3Q8N328 593 aa15.88■□□□□ 0.13
USB1-214ENST00000568848 KRI1Q8N9T8 703 aaKnown RBP15.88■□□□□ 0.13
USB1-214ENST00000568848 SLC6A17Q9H1V8 727 aa15.88■□□□□ 0.13
USB1-214ENST00000568848 ST6GALNAC4Q9H4F1 302 aa15.88■□□□□ 0.13
USB1-214ENST00000568848 MAGEC2Q9UBF1 373 aaPredicted RBP15.88■□□□□ 0.13
USB1-214ENST00000568848 A0A087X0B3 334 aa15.87■□□□□ 0.13
USB1-214ENST00000568848 ZNF840PA6NDX5 716 aa15.87■□□□□ 0.13
USB1-214ENST00000568848 MAP3K13O43283 966 aa15.87■□□□□ 0.13
USB1-214ENST00000568848 EIF5BO60841 1220 aaKnown RBP15.87■□□□□ 0.13
USB1-214ENST00000568848 KAT7O95251 611 aa15.87■□□□□ 0.13
USB1-214ENST00000568848 KIR2DL1P43626 348 aaPredicted RBP15.87■□□□□ 0.13
USB1-214ENST00000568848 NR1H3Q13133 447 aa15.87■□□□□ 0.13
USB1-214ENST00000568848 C19orf48Q6RUI8 117 aa15.87■□□□□ 0.13
USB1-214ENST00000568848 ADGRG2Q8IZP9 1017 aa15.87■□□□□ 0.13
USB1-214ENST00000568848 TMEM86AQ8N2M4 240 aa15.87■□□□□ 0.13
USB1-214ENST00000568848 CHCHD4Q8N4Q1 142 aa15.87■□□□□ 0.13
USB1-214ENST00000568848 KCTD17Q8N5Z5 321 aa15.87■□□□□ 0.13
USB1-214ENST00000568848 TOP6BLQ8N6T0 577 aa15.87■□□□□ 0.13
USB1-214ENST00000568848 LRRC52Q8N7C0 313 aa15.87■□□□□ 0.13
USB1-214ENST00000568848 PCED1BQ96HM7 432 aa15.87■□□□□ 0.13
USB1-214ENST00000568848 ACCSQ96QU6 501 aa15.87■□□□□ 0.13
USB1-214ENST00000568848 ZNF518BQ9C0D4 1074 aa15.87■□□□□ 0.13
USB1-214ENST00000568848 GDAP2Q9NXN4 497 aa15.87■□□□□ 0.13
USB1-214ENST00000568848 LHX6Q9UPM6 363 aa15.87■□□□□ 0.13
USB1-214ENST00000568848 PCDH15Q96QU1 1955 aa15.86■□□□□ 0.13
USB1-214ENST00000568848 TMEM191BP0C7N4 346 aa15.86■□□□□ 0.13
USB1-214ENST00000568848 IRF1P10914 325 aa15.86■□□□□ 0.13
USB1-214ENST00000568848 MBL2P11226 248 aaPredicted RBP15.86■□□□□ 0.13
USB1-214ENST00000568848 IDEP14735 1019 aa15.86■□□□□ 0.13
USB1-214ENST00000568848 LONP1P36776 959 aaKnown RBP15.86■□□□□ 0.13
USB1-214ENST00000568848 PGFP49763 221 aa15.86■□□□□ 0.13
USB1-214ENST00000568848 RBP5P82980 135 aa15.86■□□□□ 0.13
USB1-214ENST00000568848 CEBPZQ03701 1054 aaKnown RBP15.86■□□□□ 0.13
USB1-214ENST00000568848 TAF10Q12962 218 aa15.86■□□□□ 0.13
USB1-214ENST00000568848 RESTQ13127 1097 aa15.86■□□□□ 0.13
USB1-214ENST00000568848 LY6G5CQ5SRR4 150 aa15.86■□□□□ 0.13
USB1-214ENST00000568848 LYSMD4Q5XG99 296 aa15.86■□□□□ 0.13
USB1-214ENST00000568848 DENND5BQ6ZUT9 1274 aa15.86■□□□□ 0.13
USB1-214ENST00000568848 LPCAT2Q7L5N7 544 aa15.86■□□□□ 0.13
USB1-214ENST00000568848 SYCP3Q8IZU3 236 aa15.86■□□□□ 0.13
USB1-214ENST00000568848 PHTF2Q8N3S3 785 aa15.86■□□□□ 0.13
USB1-214ENST00000568848 HPDLQ96IR7 371 aa15.86■□□□□ 0.13
USB1-214ENST00000568848 ARHGEF4Q9NR80 690 aa15.86■□□□□ 0.13
USB1-214ENST00000568848 TRPM5Q9NZQ8 1165 aa15.86■□□□□ 0.13
USB1-214ENST00000568848 ITGA11Q9UKX5 1188 aa15.86■□□□□ 0.13
USB1-214ENST00000568848 SOBPA7XYQ1 873 aa15.85■□□□□ 0.13
USB1-214ENST00000568848 MAGEA11P43364 429 aa15.85■□□□□ 0.13
USB1-214ENST00000568848 HS2ST1Q7LGA3 356 aa15.85■□□□□ 0.13
USB1-214ENST00000568848 NT5DC4Q86YG4 428 aa15.85■□□□□ 0.13
USB1-214ENST00000568848 FSIP1Q8NA03 581 aa15.85■□□□□ 0.13
USB1-214ENST00000568848 SPATA18Q8TC71 538 aa15.85■□□□□ 0.13
USB1-214ENST00000568848 PNKPQ96T60 521 aa15.85■□□□□ 0.13
USB1-214ENST00000568848 MMS19Q96T76 1030 aa15.85■□□□□ 0.13
USB1-214ENST00000568848 ACOX2Q99424 681 aa15.85■□□□□ 0.13
USB1-214ENST00000568848 INTS13Q9NVM9 706 aa15.85■□□□□ 0.13
USB1-214ENST00000568848 FBXO2Q9UK22 296 aaPredicted RBP15.85■□□□□ 0.13
USB1-214ENST00000568848 PILRBQ9UKJ0 227 aa15.85■□□□□ 0.13
USB1-214ENST00000568848 PLXND1Q9Y4D7 1925 aa15.84■□□□□ 0.13
USB1-214ENST00000568848 OAS1P00973 400 aaKnown RBP15.84■□□□□ 0.13
USB1-214ENST00000568848 CST3P01034 146 aaPredicted RBP15.84■□□□□ 0.13
USB1-214ENST00000568848 APODP05090 189 aa15.84■□□□□ 0.13
USB1-214ENST00000568848 ADH5P11766 374 aa15.84■□□□□ 0.13
USB1-214ENST00000568848 TCF3P15923 654 aa15.84■□□□□ 0.13
USB1-214ENST00000568848 GABRG2P18507 467 aa15.84■□□□□ 0.13
USB1-214ENST00000568848 PCSK1P29120 753 aa15.84■□□□□ 0.13
USB1-214ENST00000568848 LHX1P48742 406 aa15.84■□□□□ 0.13
USB1-214ENST00000568848 SLC7A9P82251 487 aa15.84■□□□□ 0.13
USB1-214ENST00000568848 MRPS21P82921 87 aaKnown RBP15.84■□□□□ 0.13
USB1-214ENST00000568848 POSTNQ15063 836 aa15.84■□□□□ 0.13
USB1-214ENST00000568848 C4orf50Q6ZRC1 276 aa15.84■□□□□ 0.13
USB1-214ENST00000568848 LIMS2Q7Z4I7 341 aa15.84■□□□□ 0.13
USB1-214ENST00000568848 PIP4P1Q86T03 277 aa15.84■□□□□ 0.13
USB1-214ENST00000568848 MARCH9Q86YJ5 346 aa15.84■□□□□ 0.13
USB1-214ENST00000568848 SYT12Q8IV01 421 aa15.84■□□□□ 0.13
USB1-214ENST00000568848 SLC41A1Q8IVJ1 513 aa15.84■□□□□ 0.13
USB1-214ENST00000568848 BBS7Q8IWZ6 715 aa15.84■□□□□ 0.13
USB1-214ENST00000568848 PNPLA1Q8N8W4 532 aa15.84■□□□□ 0.13
USB1-214ENST00000568848 RDH13Q8NBN7 331 aa15.84■□□□□ 0.13
USB1-214ENST00000568848 WHAMMQ8TF30 809 aa15.84■□□□□ 0.13
USB1-214ENST00000568848 CACTINQ8WUQ7 758 aaKnown RBP15.84■□□□□ 0.13
USB1-214ENST00000568848 EXOC4Q96A65 974 aa15.84■□□□□ 0.13
USB1-214ENST00000568848 FUBP3Q96I24 572 aaKnown RBP eCLIP15.84■□□□□ 0.13
USB1-214ENST00000568848 ZFRQ96KR1 1074 aaKnown RBP15.84■□□□□ 0.13
USB1-214ENST00000568848 NUSAP1Q9BXS6 441 aaKnown RBP15.84■□□□□ 0.13
USB1-214ENST00000568848 CALCOCO1Q9P1Z2 691 aa15.84■□□□□ 0.13
USB1-214ENST00000568848 EVLQ9UI08 416 aaPredicted RBP15.84■□□□□ 0.13
USB1-214ENST00000568848 CDH9Q9ULB4 789 aa15.84■□□□□ 0.13
USB1-214ENST00000568848 RAD54BQ9Y620 910 aa15.84■□□□□ 0.13
USB1-214ENST00000568848 VPS37CA5D8V6 355 aaPredicted RBP15.83■□□□□ 0.12
USB1-214ENST00000568848 TNFRSF10BO14763 440 aa15.83■□□□□ 0.12
USB1-214ENST00000568848 OLFM2O95897 454 aa15.83■□□□□ 0.12
USB1-214ENST00000568848 WARSP23381 471 aaKnown RBP15.83■□□□□ 0.12
USB1-214ENST00000568848 ANXA13P27216 316 aa15.83■□□□□ 0.12
USB1-214ENST00000568848 HOXD13P35453 343 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms