RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 MED10Q9BTT4 135 aa19.79■□□□□ 0.76
LINC01238-205ENST00000567549 IMPG2Q9BZV3 1241 aa19.79■□□□□ 0.76
LINC01238-205ENST00000567549 EBF1Q9UH73 591 aa19.79■□□□□ 0.76
LINC01238-205ENST00000567549 FRMD4BQ9Y2L6 1034 aa19.79■□□□□ 0.76
LINC01238-205ENST00000567549 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.79■□□□□ 0.76
LINC01238-205ENST00000567549 OTOL1A6NHN0 477 aaPredicted RBP19.78■□□□□ 0.76
LINC01238-205ENST00000567549 LEFTY2O00292 366 aa19.78■□□□□ 0.76
LINC01238-205ENST00000567549 HCRTO43612 131 aa19.78■□□□□ 0.76
LINC01238-205ENST00000567549 EPN2O95208 641 aa19.78■□□□□ 0.76
LINC01238-205ENST00000567549 YWHAQP27348 245 aa19.78■□□□□ 0.76
LINC01238-205ENST00000567549 MYL6P60660 151 aa19.78■□□□□ 0.76
LINC01238-205ENST00000567549 SRSF5Q13243 272 aaKnown RBP19.78■□□□□ 0.76
LINC01238-205ENST00000567549 DMC1Q14565 340 aa19.78■□□□□ 0.76
LINC01238-205ENST00000567549 SGSM1Q2NKQ1 1148 aa19.78■□□□□ 0.76
LINC01238-205ENST00000567549 SLC9A9Q8IVB4 645 aa19.78■□□□□ 0.76
LINC01238-205ENST00000567549 CHFRQ96EP1 664 aa19.78■□□□□ 0.76
LINC01238-205ENST00000567549 SMARCD1Q96GM5 515 aa19.78■□□□□ 0.76
LINC01238-205ENST00000567549 ZC3H10Q96K80 434 aaKnown RBP19.78■□□□□ 0.76
LINC01238-205ENST00000567549 FAM84AQ96KN4 292 aa19.78■□□□□ 0.76
LINC01238-205ENST00000567549 IPO9Q96P70 1041 aaKnown RBP19.78■□□□□ 0.76
LINC01238-205ENST00000567549 SLC22A12Q96S37 553 aa19.78■□□□□ 0.76
LINC01238-205ENST00000567549 DMAP1Q9NPF5 467 aaPredicted RBP19.78■□□□□ 0.76
LINC01238-205ENST00000567549 ATP6V1DQ9Y5K8 247 aa19.78■□□□□ 0.76
LINC01238-205ENST00000567549 PDXKO00764 312 aa19.77■□□□□ 0.76
LINC01238-205ENST00000567549 CALUO43852 315 aaPredicted RBP19.77■□□□□ 0.76
LINC01238-205ENST00000567549 ALDH1A2O94788 518 aa19.77■□□□□ 0.76
LINC01238-205ENST00000567549 ZNF806P0C7X5 589 aa19.77■□□□□ 0.76
LINC01238-205ENST00000567549 MBL2P11226 248 aaPredicted RBP19.77■□□□□ 0.76
LINC01238-205ENST00000567549 LIMK1P53667 647 aa19.77■□□□□ 0.76
LINC01238-205ENST00000567549 TAF10Q12962 218 aa19.77■□□□□ 0.76
LINC01238-205ENST00000567549 CUL4BQ13620 913 aa19.77■□□□□ 0.76
LINC01238-205ENST00000567549 NCOA4Q13772 614 aa19.77■□□□□ 0.76
LINC01238-205ENST00000567549 FOXD4L6Q3SYB3 417 aaPredicted RBP19.77■□□□□ 0.76
LINC01238-205ENST00000567549 FOXD4L3Q6VB84 417 aaPredicted RBP19.77■□□□□ 0.76
LINC01238-205ENST00000567549 TSTD1Q8NFU3 115 aa19.77■□□□□ 0.76
LINC01238-205ENST00000567549 PARD3BQ8TEW8 1205 aa19.77■□□□□ 0.76
LINC01238-205ENST00000567549 FBXO32Q969P5 355 aa19.77■□□□□ 0.76
LINC01238-205ENST00000567549 NACA2Q9H009 215 aa19.77■□□□□ 0.76
LINC01238-205ENST00000567549 RCOR1Q9UKL0 485 aa19.77■□□□□ 0.76
LINC01238-205ENST00000567549 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.76■□□□□ 0.75
LINC01238-205ENST00000567549 IKBKBO14920 756 aa19.76■□□□□ 0.75
LINC01238-205ENST00000567549 OLFM2O95897 454 aa19.76■□□□□ 0.75
LINC01238-205ENST00000567549 OAS1P00973 400 aaKnown RBP19.76■□□□□ 0.75
LINC01238-205ENST00000567549 RAP1GAPP47736 663 aa19.76■□□□□ 0.75
LINC01238-205ENST00000567549 TUBP50607 506 aa19.76■□□□□ 0.75
LINC01238-205ENST00000567549 CLDN10P78369 228 aa19.76■□□□□ 0.75
LINC01238-205ENST00000567549 MRPS21P82921 87 aaKnown RBP19.76■□□□□ 0.75
LINC01238-205ENST00000567549 GOLGA8FQ08AF8 430 aa19.76■□□□□ 0.75
LINC01238-205ENST00000567549 GOLGA8DPQ0D2H9 430 aa19.76■□□□□ 0.75
LINC01238-205ENST00000567549 CCDC142Q17RM4 750 aa19.76■□□□□ 0.75
LINC01238-205ENST00000567549 USP39Q53GS9 565 aaKnown RBP19.76■□□□□ 0.75
LINC01238-205ENST00000567549 BTBD8Q5XKL5 378 aa19.76■□□□□ 0.75
LINC01238-205ENST00000567549 CCDC150Q8NCX0 1101 aa19.76■□□□□ 0.75
LINC01238-205ENST00000567549 TMC2Q8TDI7 906 aa19.76■□□□□ 0.75
LINC01238-205ENST00000567549 FBXO44Q9H4M3 255 aa19.76■□□□□ 0.75
LINC01238-205ENST00000567549 VPS45Q9NRW7 570 aa19.76■□□□□ 0.75
LINC01238-205ENST00000567549 CPQQ9Y646 472 aa19.76■□□□□ 0.75
LINC01238-205ENST00000567549 ATG2BQ96BY7 2078 aa19.75■□□□□ 0.75
LINC01238-205ENST00000567549 E2F8A0AVK6 867 aa19.75■□□□□ 0.75
LINC01238-205ENST00000567549 APODP05090 189 aa19.75■□□□□ 0.75
LINC01238-205ENST00000567549 CMA1P23946 247 aa19.75■□□□□ 0.75
LINC01238-205ENST00000567549 DGKEP52429 567 aa19.75■□□□□ 0.75
LINC01238-205ENST00000567549 USP46P62068 366 aa19.75■□□□□ 0.75
LINC01238-205ENST00000567549 IFRD2Q12894 506 aaPredicted RBP19.75■□□□□ 0.75
LINC01238-205ENST00000567549 HECTD3Q5T447 861 aa19.75■□□□□ 0.75
LINC01238-205ENST00000567549 UNC93AQ86WB7 457 aa19.75■□□□□ 0.75
LINC01238-205ENST00000567549 RIN3Q8TB24 985 aa19.75■□□□□ 0.75
LINC01238-205ENST00000567549 HHIPQ96QV1 700 aa19.75■□□□□ 0.75
LINC01238-205ENST00000567549 ZNF518BQ9C0D4 1074 aa19.75■□□□□ 0.75
LINC01238-205ENST00000567549 XYLT2Q9H1B5 865 aa19.75■□□□□ 0.75
LINC01238-205ENST00000567549 ARRDC1-AS1Q9H2J1 176 aa19.75■□□□□ 0.75
LINC01238-205ENST00000567549 C2orf42Q9NWW7 574 aa19.75■□□□□ 0.75
LINC01238-205ENST00000567549 SH3BP1Q9Y3L3 701 aa19.75■□□□□ 0.75
LINC01238-205ENST00000567549 DCDC2BA2VCK2 349 aa19.74■□□□□ 0.75
LINC01238-205ENST00000567549 MAPK13O15264 365 aa19.74■□□□□ 0.75
LINC01238-205ENST00000567549 RPL13P26373 211 aaKnown RBP19.74■□□□□ 0.75
LINC01238-205ENST00000567549 PXNP49023 591 aaPredicted RBP19.74■□□□□ 0.75
LINC01238-205ENST00000567549 KRT85P78386 507 aa19.74■□□□□ 0.75
LINC01238-205ENST00000567549 BYSLQ13895 437 aaKnown RBP19.74■□□□□ 0.75
LINC01238-205ENST00000567549 SCARA3Q6AZY7 606 aa19.74■□□□□ 0.75
LINC01238-205ENST00000567549 PKN3Q6P5Z2 889 aa19.74■□□□□ 0.75
LINC01238-205ENST00000567549 FILIP1Q7Z7B0 1213 aa19.74■□□□□ 0.75
LINC01238-205ENST00000567549 FAM35AQ86V20 835 aa19.74■□□□□ 0.75
LINC01238-205ENST00000567549 ZNF516Q92618 1163 aa19.74■□□□□ 0.75
LINC01238-205ENST00000567549 PAGE5Q96GU1 130 aa19.74■□□□□ 0.75
LINC01238-205ENST00000567549 SPATA32Q96LK8 384 aa19.74■□□□□ 0.75
LINC01238-205ENST00000567549 PNKPQ96T60 521 aa19.74■□□□□ 0.75
LINC01238-205ENST00000567549 DUSP9Q99956 384 aaKnown RBP19.74■□□□□ 0.75
LINC01238-205ENST00000567549 B3GNT5Q9BYG0 378 aa19.74■□□□□ 0.75
LINC01238-205ENST00000567549 FBRSL1Q9HCM7 1045 aaKnown RBP19.74■□□□□ 0.75
LINC01238-205ENST00000567549 POLMQ9NP87 494 aaPredicted RBP19.74■□□□□ 0.75
LINC01238-205ENST00000567549 CFAP97Q9P2B7 532 aa19.74■□□□□ 0.75
LINC01238-205ENST00000567549 SERTAD1Q9UHV2 236 aa19.74■□□□□ 0.75
LINC01238-205ENST00000567549 LRRIQ3A6PVS8 624 aaPredicted RBP19.73■□□□□ 0.75
LINC01238-205ENST00000567549 NR3C1P04150 777 aa19.73■□□□□ 0.75
LINC01238-205ENST00000567549 GBP1P32455 592 aa19.73■□□□□ 0.75
LINC01238-205ENST00000567549 MPLP40238 635 aa19.73■□□□□ 0.75
LINC01238-205ENST00000567549 DNM1Q05193 864 aaKnown RBP19.73■□□□□ 0.75
LINC01238-205ENST00000567549 GAD2Q05329 585 aa19.73■□□□□ 0.75
LINC01238-205ENST00000567549 ENPEPQ07075 957 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms