RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 TANGO2Q6ICL3 276 aa13.13□□□□□ -0.31
RNF40-211ENST00000567365 MON1AQ86VX9 555 aa13.13□□□□□ -0.31
RNF40-211ENST00000567365 FAM71AQ8IYT1 594 aa13.13□□□□□ -0.31
RNF40-211ENST00000567365 SLC44A3Q8N4M1 653 aa13.13□□□□□ -0.31
RNF40-211ENST00000567365 SMARCD2Q92925 531 aa13.13□□□□□ -0.31
RNF40-211ENST00000567365 LRRC3BQ96PB8 259 aa13.13□□□□□ -0.31
RNF40-211ENST00000567365 PLA2G2FQ9BZM2 168 aa13.13□□□□□ -0.31
RNF40-211ENST00000567365 DNAI2Q9GZS0 605 aa13.13□□□□□ -0.31
RNF40-211ENST00000567365 SMOC2Q9H3U7 446 aa13.13□□□□□ -0.31
RNF40-211ENST00000567365 RTN4Q9NQC3 1192 aaKnown RBP13.13□□□□□ -0.31
RNF40-211ENST00000567365 DNAJC12Q9UKB3 198 aa13.13□□□□□ -0.31
RNF40-211ENST00000567365 MAGED2Q9UNF1 606 aaPredicted RBP13.13□□□□□ -0.31
RNF40-211ENST00000567365 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.13□□□□□ -0.31
RNF40-211ENST00000567365 FHOD1Q9Y613 1164 aa13.13□□□□□ -0.31
RNF40-211ENST00000567365 USP3Q9Y6I4 520 aa13.13□□□□□ -0.31
RNF40-211ENST00000567365 NUMBLQ9Y6R0 609 aa13.13□□□□□ -0.31
RNF40-211ENST00000567365 COL4A2P08572 1712 aa13.13□□□□□ -0.31
RNF40-211ENST00000567365 ZNF840PA6NDX5 716 aa13.12□□□□□ -0.31
RNF40-211ENST00000567365 PRR33A8MZF0 331 aa13.12□□□□□ -0.31
RNF40-211ENST00000567365 TULP2O00295 520 aa13.12□□□□□ -0.31
RNF40-211ENST00000567365 FOXN3O00409 490 aaPredicted RBP13.12□□□□□ -0.31
RNF40-211ENST00000567365 EPHB6O15197 1021 aa13.12□□□□□ -0.31
RNF40-211ENST00000567365 GABBR2O75899 941 aa13.12□□□□□ -0.31
RNF40-211ENST00000567365 RTN3O95197 1032 aaPredicted RBP13.12□□□□□ -0.31
RNF40-211ENST00000567365 OLFM2O95897 454 aa13.12□□□□□ -0.31
RNF40-211ENST00000567365 TRIM21P19474 475 aaKnown RBP13.12□□□□□ -0.31
RNF40-211ENST00000567365 RFX1P22670 979 aa13.12□□□□□ -0.31
RNF40-211ENST00000567365 BRD2P25440 801 aaKnown RBP13.12□□□□□ -0.31
RNF40-211ENST00000567365 RPL34P49207 117 aaKnown RBP13.12□□□□□ -0.31
RNF40-211ENST00000567365 PGFP49763 221 aa13.12□□□□□ -0.31
RNF40-211ENST00000567365 KLK7P49862 253 aa13.12□□□□□ -0.31
RNF40-211ENST00000567365 MFAP3P55082 362 aa13.12□□□□□ -0.31
RNF40-211ENST00000567365 PDE4CQ08493 712 aa13.12□□□□□ -0.31
RNF40-211ENST00000567365 TAF10Q12962 218 aa13.12□□□□□ -0.31
RNF40-211ENST00000567365 TDGQ13569 410 aa13.12□□□□□ -0.31
RNF40-211ENST00000567365 TAF12Q16514 161 aa13.12□□□□□ -0.31
RNF40-211ENST00000567365 MEA1Q16626 185 aa13.12□□□□□ -0.31
RNF40-211ENST00000567365 GPR158Q5T848 1215 aa13.12□□□□□ -0.31
RNF40-211ENST00000567365 MTSS1LQ765P7 747 aa13.12□□□□□ -0.31
RNF40-211ENST00000567365 LUZP1Q86V48 1076 aa13.12□□□□□ -0.31
RNF40-211ENST00000567365 ALYREFQ86V81 257 aaKnown RBP13.12□□□□□ -0.31
RNF40-211ENST00000567365 PIGZQ86VD9 579 aa13.12□□□□□ -0.31
RNF40-211ENST00000567365 ST13P5Q8NFI4 369 aaPredicted RBP13.12□□□□□ -0.31
RNF40-211ENST00000567365 ZSCAN18Q8TBC5 510 aaPredicted RBP13.12□□□□□ -0.31
RNF40-211ENST00000567365 SLC35F5Q8WV83 523 aa13.12□□□□□ -0.31
RNF40-211ENST00000567365 OVCA2Q8WZ82 227 aa13.12□□□□□ -0.31
RNF40-211ENST00000567365 ELSPBP1Q96BH3 223 aa13.12□□□□□ -0.31
RNF40-211ENST00000567365 SLC22A12Q96S37 553 aa13.12□□□□□ -0.31
RNF40-211ENST00000567365 LSM14BQ9BX40 385 aaKnown RBP13.12□□□□□ -0.31
RNF40-211ENST00000567365 ACP6Q9NPH0 428 aa13.12□□□□□ -0.31
RNF40-211ENST00000567365 EHD2Q9NZN4 543 aa13.12□□□□□ -0.31
RNF40-211ENST00000567365 DUSP12Q9UNI6 340 aa13.12□□□□□ -0.31
RNF40-211ENST00000567365 HELZP42694 1942 aaKnown RBP13.11□□□□□ -0.31
RNF40-211ENST00000567365 MYO16Q9Y6X6 1858 aa13.11□□□□□ -0.31
RNF40-211ENST00000567365 A0A1B0GTH6 734 aa13.11□□□□□ -0.31
RNF40-211ENST00000567365 XPO1O14980 1071 aaKnown RBP13.11□□□□□ -0.31
RNF40-211ENST00000567365 TEX33O43247 280 aa13.11□□□□□ -0.31
RNF40-211ENST00000567365 PRAMEF12O95522 483 aa13.11□□□□□ -0.31
RNF40-211ENST00000567365 CD19P15391 556 aa13.11□□□□□ -0.31
RNF40-211ENST00000567365 PFKLP17858 780 aa13.11□□□□□ -0.31
RNF40-211ENST00000567365 CDK11BP21127 795 aaKnown RBP13.11□□□□□ -0.31
RNF40-211ENST00000567365 YWHAQP27348 245 aa13.11□□□□□ -0.31
RNF40-211ENST00000567365 CLCN1P35523 988 aa13.11□□□□□ -0.31
RNF40-211ENST00000567365 PLA2G4AP47712 749 aa13.11□□□□□ -0.31
RNF40-211ENST00000567365 PPP3CCP48454 512 aa13.11□□□□□ -0.31
RNF40-211ENST00000567365 BCAT1P54687 386 aa13.11□□□□□ -0.31
RNF40-211ENST00000567365 JAM2P57087 298 aa13.11□□□□□ -0.31
RNF40-211ENST00000567365 ZNF445P59923 1031 aa13.11□□□□□ -0.31
RNF40-211ENST00000567365 ZXDAP98168 799 aa13.11□□□□□ -0.31
RNF40-211ENST00000567365 SYCP1Q15431 976 aa13.11□□□□□ -0.31
RNF40-211ENST00000567365 STILQ15468 1287 aa13.11□□□□□ -0.31
RNF40-211ENST00000567365 ARHGAP44Q17R89 818 aa13.11□□□□□ -0.31
RNF40-211ENST00000567365 GOLGA7BQ2TAP0 167 aa13.11□□□□□ -0.31
RNF40-211ENST00000567365 TXNDC8Q6A555 127 aa13.11□□□□□ -0.31
RNF40-211ENST00000567365 LRSAM1Q6UWE0 723 aa13.11□□□□□ -0.31
RNF40-211ENST00000567365 BHLHA9Q7RTU4 235 aa13.11□□□□□ -0.31
RNF40-211ENST00000567365 ARID3BQ8IVW6 561 aaPredicted RBP13.11□□□□□ -0.31
RNF40-211ENST00000567365 UBALD2Q8IYN6 164 aa13.11□□□□□ -0.31
RNF40-211ENST00000567365 CMTM8Q8IZV2 173 aa13.11□□□□□ -0.31
RNF40-211ENST00000567365 ANKRD20A12PQ8NF67 263 aa13.11□□□□□ -0.31
RNF40-211ENST00000567365 ZNF606Q8WXB4 792 aa13.11□□□□□ -0.31
RNF40-211ENST00000567365 MRPS31Q92665 395 aaKnown RBP13.11□□□□□ -0.31
RNF40-211ENST00000567365 EDAQ92838 391 aa13.11□□□□□ -0.31
RNF40-211ENST00000567365 NAP1L5Q96NT1 182 aaPredicted RBP13.11□□□□□ -0.31
RNF40-211ENST00000567365 SCML2Q9UQR0 700 aa13.11□□□□□ -0.31
RNF40-211ENST00000567365 C2orf78A6NCI8 922 aa13.1□□□□□ -0.31
RNF40-211ENST00000567365 ARNTLO00327 626 aa13.1□□□□□ -0.31
RNF40-211ENST00000567365 PES1O00541 588 aaKnown RBP13.1□□□□□ -0.31
RNF40-211ENST00000567365 NARSO43776 548 aaKnown RBP13.1□□□□□ -0.31
RNF40-211ENST00000567365 OAS1P00973 400 aaKnown RBP13.1□□□□□ -0.31
RNF40-211ENST00000567365 CFHP08603 1231 aa13.1□□□□□ -0.31
RNF40-211ENST00000567365 PNMA6AP0CW24 399 aaPredicted RBP13.1□□□□□ -0.31
RNF40-211ENST00000567365 SETSIPP0DME0 302 aa13.1□□□□□ -0.31
RNF40-211ENST00000567365 KRT5P13647 590 aa13.1□□□□□ -0.31
RNF40-211ENST00000567365 ALADP13716 330 aa13.1□□□□□ -0.31
RNF40-211ENST00000567365 VIPR2P41587 438 aa13.1□□□□□ -0.31
RNF40-211ENST00000567365 FCHO2Q0JRZ9 810 aa13.1□□□□□ -0.31
RNF40-211ENST00000567365 BST2Q10589 180 aaKnown RBP13.1□□□□□ -0.31
RNF40-211ENST00000567365 ZNF268Q14587 947 aaPredicted RBP13.1□□□□□ -0.31
RNF40-211ENST00000567365 DRAP1Q14919 205 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms