RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 HYAL3O43820 417 aaPredicted RBP16.54■□□□□ 0.24
PALB2-205ENST00000567003 BMP15O95972 392 aa16.54■□□□□ 0.24
PALB2-205ENST00000567003 IDEP14735 1019 aa16.54■□□□□ 0.24
PALB2-205ENST00000567003 GAP43P17677 238 aa16.54■□□□□ 0.24
PALB2-205ENST00000567003 GARTP22102 1010 aa16.54■□□□□ 0.24
PALB2-205ENST00000567003 P2RY2P41231 377 aa16.54■□□□□ 0.24
PALB2-205ENST00000567003 CACNA2D1P54289 1103 aa16.54■□□□□ 0.24
PALB2-205ENST00000567003 IFRD2Q12894 506 aaPredicted RBP16.54■□□□□ 0.24
PALB2-205ENST00000567003 MDH1BQ5I0G3 518 aa16.54■□□□□ 0.24
PALB2-205ENST00000567003 LIMS2Q7Z4I7 341 aa16.54■□□□□ 0.24
PALB2-205ENST00000567003 DEFB119Q8N690 84 aa16.54■□□□□ 0.24
PALB2-205ENST00000567003 SPATA18Q8TC71 538 aa16.54■□□□□ 0.24
PALB2-205ENST00000567003 HMGB4Q8WW32 186 aa16.54■□□□□ 0.24
PALB2-205ENST00000567003 HPDLQ96IR7 371 aa16.54■□□□□ 0.24
PALB2-205ENST00000567003 ANKRD36BP1Q96IX9 119 aa16.54■□□□□ 0.24
PALB2-205ENST00000567003 MRPL45Q9BRJ2 306 aaKnown RBP16.54■□□□□ 0.24
PALB2-205ENST00000567003 TMEM30AQ9NV96 361 aa16.54■□□□□ 0.24
PALB2-205ENST00000567003 INTS13Q9NVM9 706 aa16.54■□□□□ 0.24
PALB2-205ENST00000567003 BCCIPQ9P287 314 aaKnown RBP eCLIP16.54■□□□□ 0.24
PALB2-205ENST00000567003 CFAP97Q9P2B7 532 aa16.54■□□□□ 0.24
PALB2-205ENST00000567003 SEL1LQ9UBV2 794 aa16.54■□□□□ 0.24
PALB2-205ENST00000567003 STK17AQ9UEE5 414 aa16.54■□□□□ 0.24
PALB2-205ENST00000567003 CDH9Q9ULB4 789 aa16.54■□□□□ 0.24
PALB2-205ENST00000567003 FASNP49327 2511 aaKnown RBP16.53■□□□□ 0.24
PALB2-205ENST00000567003 PLXND1Q9Y4D7 1925 aa16.53■□□□□ 0.24
PALB2-205ENST00000567003 SPAARA0A1B0GVQ0 90 aa16.53■□□□□ 0.24
PALB2-205ENST00000567003 ZNF840PA6NDX5 716 aa16.53■□□□□ 0.24
PALB2-205ENST00000567003 F8VP50 259 aa16.53■□□□□ 0.24
PALB2-205ENST00000567003 MAP3K13O43283 966 aa16.53■□□□□ 0.24
PALB2-205ENST00000567003 ADAM23O75077 832 aa16.53■□□□□ 0.24
PALB2-205ENST00000567003 ALDH1A2O94788 518 aa16.53■□□□□ 0.24
PALB2-205ENST00000567003 KAT7O95251 611 aa16.53■□□□□ 0.24
PALB2-205ENST00000567003 LDHAP00338 332 aaKnown RBP16.53■□□□□ 0.24
PALB2-205ENST00000567003 ENGP17813 658 aa16.53■□□□□ 0.24
PALB2-205ENST00000567003 ANXA13P27216 316 aa16.53■□□□□ 0.24
PALB2-205ENST00000567003 SLC7A9P82251 487 aa16.53■□□□□ 0.24
PALB2-205ENST00000567003 MRPS21P82921 87 aaKnown RBP16.53■□□□□ 0.24
PALB2-205ENST00000567003 RESTQ13127 1097 aa16.53■□□□□ 0.24
PALB2-205ENST00000567003 RRAGBQ5VZM2 374 aa16.53■□□□□ 0.24
PALB2-205ENST00000567003 VSTM1Q6UX27 236 aa16.53■□□□□ 0.24
PALB2-205ENST00000567003 LPCAT2Q7L5N7 544 aa16.53■□□□□ 0.24
PALB2-205ENST00000567003 CBWD2Q8IUF1 395 aa16.53■□□□□ 0.24
PALB2-205ENST00000567003 ADGRG2Q8IZP9 1017 aa16.53■□□□□ 0.24
PALB2-205ENST00000567003 GLIS3Q8NEA6 775 aa16.53■□□□□ 0.24
PALB2-205ENST00000567003 CCDC26Q8TAB7 109 aa16.53■□□□□ 0.24
PALB2-205ENST00000567003 ZCCHC14Q8WYQ9 949 aaKnown RBP16.53■□□□□ 0.24
PALB2-205ENST00000567003 HPS3Q969F9 1004 aa16.53■□□□□ 0.24
PALB2-205ENST00000567003 PCED1BQ96HM7 432 aa16.53■□□□□ 0.24
PALB2-205ENST00000567003 PNKPQ96T60 521 aa16.53■□□□□ 0.24
PALB2-205ENST00000567003 TTLL2Q9BWV7 592 aa16.53■□□□□ 0.24
PALB2-205ENST00000567003 EVLQ9UI08 416 aaPredicted RBP16.53■□□□□ 0.24
PALB2-205ENST00000567003 FBXO2Q9UK22 296 aaPredicted RBP16.53■□□□□ 0.24
PALB2-205ENST00000567003 CEP192Q8TEP8 1941 aa16.53■□□□□ 0.24
PALB2-205ENST00000567003 ANKRD11Q6UB99 2663 aaPredicted RBP16.52■□□□□ 0.24
PALB2-205ENST00000567003 A0A087X0B3 334 aa16.52■□□□□ 0.24
PALB2-205ENST00000567003 TCRBV21S2A2A0A5A6 115 aa16.52■□□□□ 0.24
PALB2-205ENST00000567003 SRRM3A6NNA2 597 aaPredicted RBP16.52■□□□□ 0.24
PALB2-205ENST00000567003 APODP05090 189 aa16.52■□□□□ 0.24
PALB2-205ENST00000567003 WARSP23381 471 aaKnown RBP16.52■□□□□ 0.24
PALB2-205ENST00000567003 PDE6CP51160 858 aa16.52■□□□□ 0.24
PALB2-205ENST00000567003 MYO1EQ12965 1108 aa16.52■□□□□ 0.24
PALB2-205ENST00000567003 MAP7D1Q3KQU3 841 aa16.52■□□□□ 0.24
PALB2-205ENST00000567003 RHBDF2Q6PJF5 856 aa16.52■□□□□ 0.24
PALB2-205ENST00000567003 SV2BQ7L1I2 683 aa16.52■□□□□ 0.24
PALB2-205ENST00000567003 BRAPQ7Z569 592 aa16.52■□□□□ 0.24
PALB2-205ENST00000567003 GPD1LQ8N335 351 aa16.52■□□□□ 0.24
PALB2-205ENST00000567003 WHAMMQ8TF30 809 aa16.52■□□□□ 0.24
PALB2-205ENST00000567003 ERLEC1Q96DZ1 483 aa16.52■□□□□ 0.24
PALB2-205ENST00000567003 SPACA7Q96KW9 195 aa16.52■□□□□ 0.24
PALB2-205ENST00000567003 MMS19Q96T76 1030 aa16.52■□□□□ 0.24
PALB2-205ENST00000567003 PANK2Q9BZ23 570 aa16.52■□□□□ 0.24
PALB2-205ENST00000567003 DPEP3Q9H4B8 488 aa16.52■□□□□ 0.24
PALB2-205ENST00000567003 ARHGEF4Q9NR80 690 aa16.52■□□□□ 0.24
PALB2-205ENST00000567003 CCDC39Q9UFE4 941 aa16.52■□□□□ 0.24
PALB2-205ENST00000567003 KLK13Q9UKR3 277 aa16.52■□□□□ 0.24
PALB2-205ENST00000567003 PCDHB13Q9Y5F0 798 aa16.52■□□□□ 0.24
PALB2-205ENST00000567003 ITPR1Q14643 2758 aa16.52■□□□□ 0.23
PALB2-205ENST00000567003 VPS37CA5D8V6 355 aaPredicted RBP16.51■□□□□ 0.23
PALB2-205ENST00000567003 TNFRSF10BO14763 440 aa16.51■□□□□ 0.23
PALB2-205ENST00000567003 OLFM2O95897 454 aa16.51■□□□□ 0.23
PALB2-205ENST00000567003 OAS1P00973 400 aaKnown RBP16.51■□□□□ 0.23
PALB2-205ENST00000567003 TNNC2P02585 160 aa16.51■□□□□ 0.23
PALB2-205ENST00000567003 MBL2P11226 248 aaPredicted RBP16.51■□□□□ 0.23
PALB2-205ENST00000567003 ADH5P11766 374 aa16.51■□□□□ 0.23
PALB2-205ENST00000567003 ITPKAP23677 461 aa16.51■□□□□ 0.23
PALB2-205ENST00000567003 KIR2DL1P43626 348 aaPredicted RBP16.51■□□□□ 0.23
PALB2-205ENST00000567003 TAF10Q12962 218 aa16.51■□□□□ 0.23
PALB2-205ENST00000567003 LYSMD4Q5XG99 296 aa16.51■□□□□ 0.23
PALB2-205ENST00000567003 FAM173BQ6P4H8 233 aa16.51■□□□□ 0.23
PALB2-205ENST00000567003 HS2ST1Q7LGA3 356 aa16.51■□□□□ 0.23
PALB2-205ENST00000567003 SYT12Q8IV01 421 aa16.51■□□□□ 0.23
PALB2-205ENST00000567003 PGBD3Q8N328 593 aa16.51■□□□□ 0.23
PALB2-205ENST00000567003 NAT16Q8N8M0 369 aa16.51■□□□□ 0.23
PALB2-205ENST00000567003 OR2I1PQ8NGU4 316 aa16.51■□□□□ 0.23
PALB2-205ENST00000567003 MYCBPAPQ8TBZ2 947 aa16.51■□□□□ 0.23
PALB2-205ENST00000567003 NUSAP1Q9BXS6 441 aaKnown RBP16.51■□□□□ 0.23
PALB2-205ENST00000567003 ZNF518BQ9C0D4 1074 aa16.51■□□□□ 0.23
PALB2-205ENST00000567003 OLFML3Q9NRN5 406 aa16.51■□□□□ 0.23
PALB2-205ENST00000567003 PANK4Q9NVE7 773 aa16.51■□□□□ 0.23
PALB2-205ENST00000567003 R3HCC1Q9Y3T6 440 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms