RNA–Protein interactions for RNA: ENST00000566561.1

KLHDC4-216, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-216ENST00000566561 NDST1P52848 882 aa13.15□□□□□ -0.3
KLHDC4-216ENST00000566561 ATXN1P54253 815 aaKnown RBP13.15□□□□□ -0.3
KLHDC4-216ENST00000566561 NOP14P78316 857 aaKnown RBP13.15□□□□□ -0.3
KLHDC4-216ENST00000566561 TAF10Q12962 218 aa13.15□□□□□ -0.3
KLHDC4-216ENST00000566561 ORC1Q13415 861 aa13.15□□□□□ -0.3
KLHDC4-216ENST00000566561 PDGFRLQ15198 375 aa13.15□□□□□ -0.3
KLHDC4-216ENST00000566561 EDRF1Q3B7T1 1238 aa13.15□□□□□ -0.3
KLHDC4-216ENST00000566561 ZCWPW2Q504Y3 356 aa13.15□□□□□ -0.3
KLHDC4-216ENST00000566561 DGKKQ5KSL6 1271 aa13.15□□□□□ -0.3
KLHDC4-216ENST00000566561 ZNF658Q5TYW1 1059 aaPredicted RBP13.15□□□□□ -0.3
KLHDC4-216ENST00000566561 FAM35AQ86V20 835 aa13.15□□□□□ -0.3
KLHDC4-216ENST00000566561 NUP93Q8N1F7 819 aa13.15□□□□□ -0.3
KLHDC4-216ENST00000566561 ENGASEQ8NFI3 743 aa13.15□□□□□ -0.3
KLHDC4-216ENST00000566561 RIN3Q8TB24 985 aa13.15□□□□□ -0.3
KLHDC4-216ENST00000566561 SH3RF2Q8TEC5 729 aa13.15□□□□□ -0.3
KLHDC4-216ENST00000566561 SMARCE1Q969G3 411 aa13.15□□□□□ -0.3
KLHDC4-216ENST00000566561 EEF2KMTQ96G04 330 aa13.15□□□□□ -0.3
KLHDC4-216ENST00000566561 SLITRK1Q96PX8 696 aa13.15□□□□□ -0.3
KLHDC4-216ENST00000566561 GSDMAQ96QA5 445 aa13.15□□□□□ -0.3
KLHDC4-216ENST00000566561 KCNK16Q96T55 309 aa13.15□□□□□ -0.3
KLHDC4-216ENST00000566561 TSG101Q99816 390 aa13.15□□□□□ -0.3
KLHDC4-216ENST00000566561 TTLL2Q9BWV7 592 aa13.15□□□□□ -0.3
KLHDC4-216ENST00000566561 DUS2Q9NX74 493 aaKnown RBP13.15□□□□□ -0.3
KLHDC4-216ENST00000566561 GCNT4Q9P109 453 aa13.15□□□□□ -0.3
KLHDC4-216ENST00000566561 RAB23Q9ULC3 237 aa13.15□□□□□ -0.3
KLHDC4-216ENST00000566561 LILRB5O75023 590 aa13.14□□□□□ -0.31
KLHDC4-216ENST00000566561 AP1G2O75843 785 aa13.14□□□□□ -0.31
KLHDC4-216ENST00000566561 RTN3O95197 1032 aaPredicted RBP13.14□□□□□ -0.31
KLHDC4-216ENST00000566561 CCDC130P13994 396 aa13.14□□□□□ -0.31
KLHDC4-216ENST00000566561 CXCL12P48061 93 aa13.14□□□□□ -0.31
KLHDC4-216ENST00000566561 IFNAR2P48551 515 aa13.14□□□□□ -0.31
KLHDC4-216ENST00000566561 CCR3P51677 355 aa13.14□□□□□ -0.31
KLHDC4-216ENST00000566561 AMPD2Q01433 879 aa13.14□□□□□ -0.31
KLHDC4-216ENST00000566561 PPP3CAQ08209 521 aa13.14□□□□□ -0.31
KLHDC4-216ENST00000566561 ZNF77Q15935 545 aa13.14□□□□□ -0.31
KLHDC4-216ENST00000566561 UNC93AQ86WB7 457 aa13.14□□□□□ -0.31
KLHDC4-216ENST00000566561 CPA6Q8N4T0 437 aa13.14□□□□□ -0.31
KLHDC4-216ENST00000566561 TAS1R2Q8TE23 839 aa13.14□□□□□ -0.31
KLHDC4-216ENST00000566561 ERCC4Q92889 916 aaPredicted RBP13.14□□□□□ -0.31
KLHDC4-216ENST00000566561 SMARCD1Q96GM5 515 aa13.14□□□□□ -0.31
KLHDC4-216ENST00000566561 FAM126AQ9BYI3 521 aaPredicted RBP13.14□□□□□ -0.31
KLHDC4-216ENST00000566561 TMEM8AQ9HCN3 771 aa13.14□□□□□ -0.31
KLHDC4-216ENST00000566561 DMAP1Q9NPF5 467 aaPredicted RBP13.14□□□□□ -0.31
KLHDC4-216ENST00000566561 HPS4Q9NQG7 708 aa13.14□□□□□ -0.31
KLHDC4-216ENST00000566561 PRMT8Q9NR22 394 aaPredicted RBP13.14□□□□□ -0.31
KLHDC4-216ENST00000566561 TMEM30AQ9NV96 361 aa13.14□□□□□ -0.31
KLHDC4-216ENST00000566561 PCDHA5Q9Y5H7 936 aa13.14□□□□□ -0.31
KLHDC4-216ENST00000566561 WNT6Q9Y6F9 365 aa13.14□□□□□ -0.31
KLHDC4-216ENST00000566561 ZNF840PA6NDX5 716 aa13.13□□□□□ -0.31
KLHDC4-216ENST00000566561 OTOL1A6NHN0 477 aaPredicted RBP13.13□□□□□ -0.31
KLHDC4-216ENST00000566561 STX10O60499 249 aa13.13□□□□□ -0.31
KLHDC4-216ENST00000566561 PFKLP17858 780 aa13.13□□□□□ -0.31
KLHDC4-216ENST00000566561 YWHAQP27348 245 aa13.13□□□□□ -0.31
KLHDC4-216ENST00000566561 ASPAP45381 313 aa13.13□□□□□ -0.31
KLHDC4-216ENST00000566561 ENPEPQ07075 957 aa13.13□□□□□ -0.31
KLHDC4-216ENST00000566561 USP4Q13107 963 aa13.13□□□□□ -0.31
KLHDC4-216ENST00000566561 ST3GAL2Q16842 350 aa13.13□□□□□ -0.31
KLHDC4-216ENST00000566561 KRT39Q6A163 491 aa13.13□□□□□ -0.31
KLHDC4-216ENST00000566561 FUKQ8N0W3 1084 aa13.13□□□□□ -0.31
KLHDC4-216ENST00000566561 CRYBG2Q8N1P7 616 aa13.13□□□□□ -0.31
KLHDC4-216ENST00000566561 SPEM1Q8N4L4 309 aa13.13□□□□□ -0.31
KLHDC4-216ENST00000566561 PDZD8Q8NEN9 1154 aa13.13□□□□□ -0.31
KLHDC4-216ENST00000566561 SLC2A14Q8TDB8 520 aa13.13□□□□□ -0.31
KLHDC4-216ENST00000566561 OSCP1Q8WVF1 389 aa13.13□□□□□ -0.31
KLHDC4-216ENST00000566561 ATP2A3Q93084 1043 aa13.13□□□□□ -0.31
KLHDC4-216ENST00000566561 FBXO32Q969P5 355 aa13.13□□□□□ -0.31
KLHDC4-216ENST00000566561 EXOC4Q96A65 974 aa13.13□□□□□ -0.31
KLHDC4-216ENST00000566561 TIGD1Q96MW7 591 aa13.13□□□□□ -0.31
KLHDC4-216ENST00000566561 GTPBP4Q9BZE4 634 aaKnown RBP13.13□□□□□ -0.31
KLHDC4-216ENST00000566561 DNAI2Q9GZS0 605 aa13.13□□□□□ -0.31
KLHDC4-216ENST00000566561 ECT2Q9H8V3 914 aa13.13□□□□□ -0.31
KLHDC4-216ENST00000566561 KRT82Q9NSB4 513 aa13.13□□□□□ -0.31
KLHDC4-216ENST00000566561 FAM49BQ9NUQ9 324 aa13.13□□□□□ -0.31
KLHDC4-216ENST00000566561 HMGXB4Q9UGU5 601 aa13.13□□□□□ -0.31
KLHDC4-216ENST00000566561 ARHGAP26Q9UNA1 814 aa13.13□□□□□ -0.31
KLHDC4-216ENST00000566561 CHD6Q8TD26 2715 aa13.13□□□□□ -0.31
KLHDC4-216ENST00000566561 COL4A2P08572 1712 aa13.13□□□□□ -0.31
KLHDC4-216ENST00000566561 FAM208BQ5VWN6 2430 aa13.12□□□□□ -0.31
KLHDC4-216ENST00000566561 GREB1Q4ZG55 1949 aa13.12□□□□□ -0.31
KLHDC4-216ENST00000566561 LEFTY2O00292 366 aa13.12□□□□□ -0.31
KLHDC4-216ENST00000566561 CD58P19256 250 aa13.12□□□□□ -0.31
KLHDC4-216ENST00000566561 ADORA2BP29275 332 aa13.12□□□□□ -0.31
KLHDC4-216ENST00000566561 GTF2H1P32780 548 aa13.12□□□□□ -0.31
KLHDC4-216ENST00000566561 SLC5A3P53794 718 aa13.12□□□□□ -0.31
KLHDC4-216ENST00000566561 NRLP54845 237 aa13.12□□□□□ -0.31
KLHDC4-216ENST00000566561 SATB1Q01826 763 aa13.12□□□□□ -0.31
KLHDC4-216ENST00000566561 GRSF1Q12849 480 aaKnown RBP eCLIP13.12□□□□□ -0.31
KLHDC4-216ENST00000566561 NR1H3Q13133 447 aa13.12□□□□□ -0.31
KLHDC4-216ENST00000566561 STIM1Q13586 685 aa13.12□□□□□ -0.31
KLHDC4-216ENST00000566561 GAS6Q14393 721 aa13.12□□□□□ -0.31
KLHDC4-216ENST00000566561 COBLL1Q53SF7 1204 aa13.12□□□□□ -0.31
KLHDC4-216ENST00000566561 DCAF17Q5H9S7 520 aaPredicted RBP13.12□□□□□ -0.31
KLHDC4-216ENST00000566561 WDR44Q5JSH3 913 aa13.12□□□□□ -0.31
KLHDC4-216ENST00000566561 TCERG1LQ5VWI1 586 aa13.12□□□□□ -0.31
KLHDC4-216ENST00000566561 ISM2Q6H9L7 571 aa13.12□□□□□ -0.31
KLHDC4-216ENST00000566561 MAMSTRQ6ZN01 415 aa13.12□□□□□ -0.31
KLHDC4-216ENST00000566561 Q6ZS52 159 aa13.12□□□□□ -0.31
KLHDC4-216ENST00000566561 PAQR9Q6ZVX9 377 aa13.12□□□□□ -0.31
KLHDC4-216ENST00000566561 C12orf29Q8N999 325 aa13.12□□□□□ -0.31
KLHDC4-216ENST00000566561 NELL1Q92832 810 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms