RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 KHDC1Q4VXA5 237 aaKnown RBP14.87□□□□□ -0.03
CDH1-209ENST00000566510 ZNF667Q5HYK9 610 aa14.87□□□□□ -0.03
CDH1-209ENST00000566510 WASHC2DQ5SRD0 308 aa14.87□□□□□ -0.03
CDH1-209ENST00000566510 FAM102AQ5T9C2 384 aaPredicted RBP14.87□□□□□ -0.03
CDH1-209ENST00000566510 TRIM50Q86XT4 487 aa14.87□□□□□ -0.03
CDH1-209ENST00000566510 XYLT1Q86Y38 959 aa14.87□□□□□ -0.03
CDH1-209ENST00000566510 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.87□□□□□ -0.03
CDH1-209ENST00000566510 ADPGKQ9BRR6 497 aa14.87□□□□□ -0.03
CDH1-209ENST00000566510 DHRS4Q9BTZ2 278 aa14.87□□□□□ -0.03
CDH1-209ENST00000566510 CADM1Q9BY67 442 aaKnown RBP14.87□□□□□ -0.03
CDH1-209ENST00000566510 XYLT2Q9H1B5 865 aa14.87□□□□□ -0.03
CDH1-209ENST00000566510 CPSF3Q9UKF6 684 aaKnown RBP14.87□□□□□ -0.03
CDH1-209ENST00000566510 E7ESA3 106 aa14.87□□□□□ -0.03
CDH1-209ENST00000566510 MAFO75444 373 aaPredicted RBP14.87□□□□□ -0.03
CDH1-209ENST00000566510 HOXC6P09630 235 aa14.87□□□□□ -0.03
CDH1-209ENST00000566510 FAXCQ5TGI0 409 aa14.87□□□□□ -0.03
CDH1-209ENST00000566510 FAM160B1Q5W0V3 765 aa14.87□□□□□ -0.03
CDH1-209ENST00000566510 DSTYKQ6XUX3 929 aa14.87□□□□□ -0.03
CDH1-209ENST00000566510 CATSPERGQ6ZRH7 1159 aa14.87□□□□□ -0.03
CDH1-209ENST00000566510 PPM1NQ8N819 430 aa14.87□□□□□ -0.03
CDH1-209ENST00000566510 UBA3Q8TBC4 463 aa14.87□□□□□ -0.03
CDH1-209ENST00000566510 ZNF398Q8TD17 642 aa14.87□□□□□ -0.03
CDH1-209ENST00000566510 FBXO41Q8TF61 875 aa14.87□□□□□ -0.03
CDH1-209ENST00000566510 LRRN4Q8WUT4 740 aa14.87□□□□□ -0.03
CDH1-209ENST00000566510 BTBD10Q9BSF8 475 aa14.87□□□□□ -0.03
CDH1-209ENST00000566510 RAB6BQ9NRW1 208 aa14.87□□□□□ -0.03
CDH1-209ENST00000566510 HMGXB4Q9UGU5 601 aa14.87□□□□□ -0.03
CDH1-209ENST00000566510 HEY1Q9Y5J3 304 aa14.87□□□□□ -0.03
CDH1-209ENST00000566510 M0QYV0 167 aa14.86□□□□□ -0.03
CDH1-209ENST00000566510 B4GALT5O43286 388 aa14.86□□□□□ -0.03
CDH1-209ENST00000566510 FARP2O94887 1054 aaPredicted RBP14.86□□□□□ -0.03
CDH1-209ENST00000566510 CXCL8P10145 99 aa14.86□□□□□ -0.03
CDH1-209ENST00000566510 ESRRAP11474 423 aaPredicted RBP14.86□□□□□ -0.03
CDH1-209ENST00000566510 TARBP2Q15633 366 aaKnown RBP14.86□□□□□ -0.03
CDH1-209ENST00000566510 LY6KQ17RY6 165 aa14.86□□□□□ -0.03
CDH1-209ENST00000566510 CCDC62Q6P9F0 684 aa14.86□□□□□ -0.03
CDH1-209ENST00000566510 NSL1Q96IY1 281 aa14.86□□□□□ -0.03
CDH1-209ENST00000566510 FRMD8P1Q9BZ68 369 aaPredicted RBP14.86□□□□□ -0.03
CDH1-209ENST00000566510 SLC13A1Q9BZW2 595 aa14.86□□□□□ -0.03
CDH1-209ENST00000566510 DCLRE1BQ9H816 532 aa14.86□□□□□ -0.03
CDH1-209ENST00000566510 HOXC10Q9NYD6 342 aa14.86□□□□□ -0.03
CDH1-209ENST00000566510 ARMCX1Q9P291 453 aa14.86□□□□□ -0.03
CDH1-209ENST00000566510 LNPEPQ9UIQ6 1025 aa14.86□□□□□ -0.03
CDH1-209ENST00000566510 ADAMTS5Q9UNA0 930 aa14.86□□□□□ -0.03
CDH1-209ENST00000566510 AFG3L2Q9Y4W6 797 aa14.86□□□□□ -0.03
CDH1-209ENST00000566510 SPDYE16A6NNV3 312 aaPredicted RBP14.86□□□□□ -0.03
CDH1-209ENST00000566510 TRAFD1O14545 582 aaPredicted RBP14.86□□□□□ -0.03
CDH1-209ENST00000566510 SMNDC1O75940 238 aaKnown RBP eCLIP14.86□□□□□ -0.03
CDH1-209ENST00000566510 TRUB2O95900 331 aaKnown RBP14.86□□□□□ -0.03
CDH1-209ENST00000566510 MYL2P10916 166 aa14.86□□□□□ -0.03
CDH1-209ENST00000566510 EN1Q05925 392 aaPredicted RBP14.86□□□□□ -0.03
CDH1-209ENST00000566510 RAB6CQ53S08 254 aa14.86□□□□□ -0.03
CDH1-209ENST00000566510 SCYL2Q6P3W7 929 aa14.86□□□□□ -0.03
CDH1-209ENST00000566510 C4orf50Q6ZRC1 276 aa14.86□□□□□ -0.03
CDH1-209ENST00000566510 RFX8Q6ZV50 586 aa14.86□□□□□ -0.03
CDH1-209ENST00000566510 TTC7BQ86TV6 843 aa14.86□□□□□ -0.03
CDH1-209ENST00000566510 PRPF39Q86UA1 669 aaKnown RBP14.86□□□□□ -0.03
CDH1-209ENST00000566510 TMEM192Q8IY95 271 aa14.86□□□□□ -0.03
CDH1-209ENST00000566510 ZBTB10Q96DT7 871 aa14.86□□□□□ -0.03
CDH1-209ENST00000566510 APOPT1Q96IL0 206 aa14.86□□□□□ -0.03
CDH1-209ENST00000566510 RAB6CQ9H0N0 254 aa14.86□□□□□ -0.03
CDH1-209ENST00000566510 SMYD3Q9H7B4 428 aa14.86□□□□□ -0.03
CDH1-209ENST00000566510 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.86□□□□□ -0.03
CDH1-209ENST00000566510 LRRC42Q9Y546 428 aa14.86□□□□□ -0.03
CDH1-209ENST00000566510 RLFQ13129 1914 aa14.85□□□□□ -0.03
CDH1-209ENST00000566510 FAM237BA0A1B0GVD1 139 aa14.85□□□□□ -0.03
CDH1-209ENST00000566510 COPEO14579 308 aa14.85□□□□□ -0.03
CDH1-209ENST00000566510 CPA2P48052 419 aa14.85□□□□□ -0.03
CDH1-209ENST00000566510 GRM1Q13255 1194 aa14.85□□□□□ -0.03
CDH1-209ENST00000566510 BLMHQ13867 455 aa14.85□□□□□ -0.03
CDH1-209ENST00000566510 SURF1Q15526 300 aa14.85□□□□□ -0.03
CDH1-209ENST00000566510 ZC3H12AQ5D1E8 599 aaKnown RBP14.85□□□□□ -0.03
CDH1-209ENST00000566510 TRAPPC12Q8WVT3 735 aa14.85□□□□□ -0.03
CDH1-209ENST00000566510 HEXIM2Q96MH2 286 aaKnown RBP14.85□□□□□ -0.03
CDH1-209ENST00000566510 TWNKQ96RR1 684 aa14.85□□□□□ -0.03
CDH1-209ENST00000566510 RSAD1Q9HA92 442 aa14.85□□□□□ -0.03
CDH1-209ENST00000566510 SIP14410 1827 aa14.85□□□□□ -0.03
CDH1-209ENST00000566510 TRIM49D1C9J1S8 452 aa14.85□□□□□ -0.03
CDH1-209ENST00000566510 E7ENQ6 273 aa14.85□□□□□ -0.03
CDH1-209ENST00000566510 KCNN4O15554 427 aa14.85□□□□□ -0.03
CDH1-209ENST00000566510 CSDE1O75534 798 aaKnown RBP14.85□□□□□ -0.03
CDH1-209ENST00000566510 ICAM3P32942 547 aa14.85□□□□□ -0.03
CDH1-209ENST00000566510 KPNB1Q14974 876 aaKnown RBP14.85□□□□□ -0.03
CDH1-209ENST00000566510 RCN1Q15293 331 aa14.85□□□□□ -0.03
CDH1-209ENST00000566510 C15orf59Q2T9L4 293 aaPredicted RBP14.85□□□□□ -0.03
CDH1-209ENST00000566510 TSNAXIP1Q2TAA8 658 aa14.85□□□□□ -0.03
CDH1-209ENST00000566510 ATF7IP2Q5U623 682 aa14.85□□□□□ -0.03
CDH1-209ENST00000566510 CMASQ8NFW8 434 aaPredicted RBP14.85□□□□□ -0.03
CDH1-209ENST00000566510 SLC44A1Q8WWI5 657 aa14.85□□□□□ -0.03
CDH1-209ENST00000566510 DNAJC9Q8WXX5 260 aa14.85□□□□□ -0.03
CDH1-209ENST00000566510 MECRQ9BV79 373 aa14.85□□□□□ -0.03
CDH1-209ENST00000566510 LHX5Q9H2C1 402 aa14.85□□□□□ -0.03
CDH1-209ENST00000566510 ASNSD1Q9NWL6 643 aa14.85□□□□□ -0.03
CDH1-209ENST00000566510 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.85□□□□□ -0.03
CDH1-209ENST00000566510 MTO1Q9Y2Z2 717 aaKnown RBP14.85□□□□□ -0.03
CDH1-209ENST00000566510 IGKV6D-21A0A0A0MT36 114 aa14.84□□□□□ -0.03
CDH1-209ENST00000566510 CCDC195A0A1B0GUA6 201 aa14.84□□□□□ -0.03
CDH1-209ENST00000566510 GSC2O15499 205 aa14.84□□□□□ -0.03
CDH1-209ENST00000566510 HNRNPCL1O60812 293 aaKnown RBP14.84□□□□□ -0.03
CDH1-209ENST00000566510 MICAL2O94851 1124 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms