RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 TMEM86AQ8N2M4 240 aa11.91□□□□□ -0.5
LINC00562-201ENST00000566385 ZMIZ2Q8NF64 920 aa11.91□□□□□ -0.5
LINC00562-201ENST00000566385 SMOQ99835 787 aa11.91□□□□□ -0.5
LINC00562-201ENST00000566385 MED10Q9BTT4 135 aa11.91□□□□□ -0.5
LINC00562-201ENST00000566385 KRT82Q9NSB4 513 aa11.91□□□□□ -0.5
LINC00562-201ENST00000566385 SAE1Q9UBE0 346 aaPredicted RBP11.91□□□□□ -0.5
LINC00562-201ENST00000566385 USP18Q9UMW8 372 aa11.91□□□□□ -0.5
LINC00562-201ENST00000566385 PRG3Q9Y2Y8 225 aaPredicted RBP11.91□□□□□ -0.5
LINC00562-201ENST00000566385 M0QZQ0 153 aa11.91□□□□□ -0.5
LINC00562-201ENST00000566385 XPO1O14980 1071 aaKnown RBP11.91□□□□□ -0.5
LINC00562-201ENST00000566385 TNFRSF8P28908 595 aa11.91□□□□□ -0.5
LINC00562-201ENST00000566385 CHRNA3P32297 505 aa11.91□□□□□ -0.5
LINC00562-201ENST00000566385 CDKN2BP42772 138 aa11.91□□□□□ -0.5
LINC00562-201ENST00000566385 OR1G1P47890 313 aa11.91□□□□□ -0.5
LINC00562-201ENST00000566385 BCAR1P56945 870 aa11.91□□□□□ -0.5
LINC00562-201ENST00000566385 TLE2Q04725 743 aa11.91□□□□□ -0.5
LINC00562-201ENST00000566385 TRIM60Q495X7 471 aa11.91□□□□□ -0.5
LINC00562-201ENST00000566385 SPOCD1Q6ZMY3 1216 aa11.91□□□□□ -0.5
LINC00562-201ENST00000566385 DEFB128Q7Z7B8 93 aa11.91□□□□□ -0.5
LINC00562-201ENST00000566385 COLGALT2Q8IYK4 626 aa11.91□□□□□ -0.5
LINC00562-201ENST00000566385 TSEN2Q8NCE0 465 aaKnown RBP11.91□□□□□ -0.5
LINC00562-201ENST00000566385 HSPH1Q92598 858 aa11.91□□□□□ -0.5
LINC00562-201ENST00000566385 HAUS1Q96CS2 278 aa11.91□□□□□ -0.5
LINC00562-201ENST00000566385 HIPK3Q9H422 1215 aa11.91□□□□□ -0.5
LINC00562-201ENST00000566385 LRRC19Q9H756 370 aa11.91□□□□□ -0.5
LINC00562-201ENST00000566385 PCYOX1Q9UHG3 505 aa11.91□□□□□ -0.5
LINC00562-201ENST00000566385 MTUS1Q9ULD2 1270 aa11.91□□□□□ -0.5
LINC00562-201ENST00000566385 RANBP2P49792 3224 aaKnown RBP11.9□□□□□ -0.5
LINC00562-201ENST00000566385 TTC3P53804 2025 aa11.9□□□□□ -0.5
LINC00562-201ENST00000566385 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.9□□□□□ -0.5
LINC00562-201ENST00000566385 PITPNM1O00562 1244 aa11.9□□□□□ -0.5
LINC00562-201ENST00000566385 RNF8O76064 485 aa11.9□□□□□ -0.5
LINC00562-201ENST00000566385 TRUB2O95900 331 aaKnown RBP11.9□□□□□ -0.5
LINC00562-201ENST00000566385 ODC1P11926 461 aa11.9□□□□□ -0.5
LINC00562-201ENST00000566385 HSPA6P17066 643 aa11.9□□□□□ -0.5
LINC00562-201ENST00000566385 PBX3P40426 434 aa11.9□□□□□ -0.5
LINC00562-201ENST00000566385 PITX1P78337 314 aaPredicted RBP11.9□□□□□ -0.5
LINC00562-201ENST00000566385 CBX1P83916 185 aa11.9□□□□□ -0.5
LINC00562-201ENST00000566385 RNASELQ05823 741 aaKnown RBP11.9□□□□□ -0.5
LINC00562-201ENST00000566385 ADCY1Q08828 1119 aa11.9□□□□□ -0.5
LINC00562-201ENST00000566385 HLTFQ14527 1009 aaKnown RBP eCLIP11.9□□□□□ -0.5
LINC00562-201ENST00000566385 CLUL1Q15846 466 aa11.9□□□□□ -0.5
LINC00562-201ENST00000566385 HDXQ7Z353 690 aa11.9□□□□□ -0.5
LINC00562-201ENST00000566385 PRUNE1Q86TP1 453 aa11.9□□□□□ -0.5
LINC00562-201ENST00000566385 FAM35AQ86V20 835 aa11.9□□□□□ -0.5
LINC00562-201ENST00000566385 RCOR2Q8IZ40 523 aa11.9□□□□□ -0.5
LINC00562-201ENST00000566385 MYCBPAPQ8TBZ2 947 aa11.9□□□□□ -0.5
LINC00562-201ENST00000566385 SEC14L1Q92503 715 aa11.9□□□□□ -0.5
LINC00562-201ENST00000566385 ERP44Q9BS26 406 aa11.9□□□□□ -0.5
LINC00562-201ENST00000566385 CNPY3Q9BT09 278 aa11.9□□□□□ -0.5
LINC00562-201ENST00000566385 FTHL17Q9BXU8 183 aa11.9□□□□□ -0.5
LINC00562-201ENST00000566385 NGRNQ9NPE2 291 aaKnown RBP11.9□□□□□ -0.5
LINC00562-201ENST00000566385 TMEM161AQ9NX61 479 aa11.9□□□□□ -0.5
LINC00562-201ENST00000566385 hCG_1818297A0A087WSY0 165 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 AP1G2O75843 785 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 OR4Q2P0C623 313 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 EPHB4P54760 987 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 PLCB3Q01970 1234 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 MMRN1Q13201 1228 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 MAP9Q49MG5 647 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 FAM182AQ5T1J6 154 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 DUPD1Q68J44 220 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 SCYL2Q6P3W7 929 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 DCLRE1AQ6PJP8 1040 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 HFE2Q6ZVN8 426 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 POLNQ7Z5Q5 900 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 CRIPAKQ8N1N5 446 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 C12orf50Q8NA57 414 aaPredicted RBP11.89□□□□□ -0.51
LINC00562-201ENST00000566385 FAM172AQ8WUF8 416 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 RUBCNQ92622 972 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 B3GALT6Q96L58 329 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 HSFY1Q96LI6 401 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 DCLK3Q9C098 648 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 ASNSD1Q9NWL6 643 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 GPATCH2LQ9NWQ4 482 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 SNX24Q9Y343 169 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 UTP11Q9Y3A2 253 aaKnown RBP11.89□□□□□ -0.51
LINC00562-201ENST00000566385 NRP1O14786 923 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 CYP11A1P05108 521 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 FAM163BP0C2L3 166 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 FAM200BP0CF97 657 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 BDNFP23560 247 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 KDELR1P24390 212 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 HDAC4P56524 1084 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 DYNLT1P63172 113 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 DHX34Q14147 1143 aaKnown RBP11.89□□□□□ -0.51
LINC00562-201ENST00000566385 TRIP13Q15645 432 aaPredicted RBP11.89□□□□□ -0.51
LINC00562-201ENST00000566385 ZC3H12AQ5D1E8 599 aaKnown RBP11.89□□□□□ -0.51
LINC00562-201ENST00000566385 TFDP3Q5H9I0 405 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 OVOS1Q6IE37 1185 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 SLC26A9Q7LBE3 791 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 ANKRD33Q7Z3H0 272 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 MYLPFQ96A32 169 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 VWCEQ96DN2 955 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 RBM41Q96IZ5 413 aaKnown RBP11.89□□□□□ -0.51
LINC00562-201ENST00000566385 SUSD3Q96L08 255 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 CASD1Q96PB1 797 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 CDH9Q9ULB4 789 aa11.89□□□□□ -0.51
LINC00562-201ENST00000566385 NT5C1B-RDH14C9J2C7 533 aa11.88□□□□□ -0.51
LINC00562-201ENST00000566385 ATP8B1O43520 1251 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms