RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 RHOBTB3O94955 611 aa19.48■□□□□ 0.71
USB1-213ENST00000566292 CLSTN1O94985 981 aa19.48■□□□□ 0.71
USB1-213ENST00000566292 OLFM2O95897 454 aa19.48■□□□□ 0.71
USB1-213ENST00000566292 OAS1P00973 400 aaKnown RBP19.48■□□□□ 0.71
USB1-213ENST00000566292 CNR2P34972 360 aa19.48■□□□□ 0.71
USB1-213ENST00000566292 PPP3CCP48454 512 aa19.48■□□□□ 0.71
USB1-213ENST00000566292 SLC7A9P82251 487 aa19.48■□□□□ 0.71
USB1-213ENST00000566292 DPYDQ12882 1025 aa19.48■□□□□ 0.71
USB1-213ENST00000566292 RSPO4Q2I0M5 234 aaPredicted RBP19.48■□□□□ 0.71
USB1-213ENST00000566292 ZACNQ401N2 412 aa19.48■□□□□ 0.71
USB1-213ENST00000566292 FAM35AQ86V20 835 aa19.48■□□□□ 0.71
USB1-213ENST00000566292 WDR5BQ86VZ2 330 aa19.48■□□□□ 0.71
USB1-213ENST00000566292 KCNK16Q96T55 309 aa19.48■□□□□ 0.71
USB1-213ENST00000566292 GOLPH3LQ9H4A5 285 aa19.48■□□□□ 0.71
USB1-213ENST00000566292 POLR3BQ9NW08 1133 aaPredicted RBP19.48■□□□□ 0.71
USB1-213ENST00000566292 TRAF3IP3Q9Y228 551 aa19.48■□□□□ 0.71
USB1-213ENST00000566292 SDK1Q7Z5N4 2213 aa19.48■□□□□ 0.71
USB1-213ENST00000566292 DRD1P21728 446 aa19.47■□□□□ 0.71
USB1-213ENST00000566292 PXNP49023 591 aaPredicted RBP19.47■□□□□ 0.71
USB1-213ENST00000566292 SPEM2Q0P670 501 aa19.47■□□□□ 0.71
USB1-213ENST00000566292 IFRD2Q12894 506 aaPredicted RBP19.47■□□□□ 0.71
USB1-213ENST00000566292 PUM1Q14671 1186 aaKnown RBP eCLIP19.47■□□□□ 0.71
USB1-213ENST00000566292 CEP135Q66GS9 1140 aa19.47■□□□□ 0.71
USB1-213ENST00000566292 SV2AQ7L0J3 742 aa19.47■□□□□ 0.71
USB1-213ENST00000566292 NUP93Q8N1F7 819 aa19.47■□□□□ 0.71
USB1-213ENST00000566292 CD101Q93033 1021 aa19.47■□□□□ 0.71
USB1-213ENST00000566292 USP18Q9UMW8 372 aa19.47■□□□□ 0.71
USB1-213ENST00000566292 GTF3C3Q9Y5Q9 886 aa19.47■□□□□ 0.71
USB1-213ENST00000566292 CPQQ9Y646 472 aa19.47■□□□□ 0.71
USB1-213ENST00000566292 A0A1W2PQ27 194 aa19.46■□□□□ 0.71
USB1-213ENST00000566292 A0A1W2PQ64 194 aa19.46■□□□□ 0.71
USB1-213ENST00000566292 A0A1W2PQD8 194 aa19.46■□□□□ 0.71
USB1-213ENST00000566292 CALUO43852 315 aaPredicted RBP19.46■□□□□ 0.71
USB1-213ENST00000566292 ABL1P00519 1130 aa19.46■□□□□ 0.71
USB1-213ENST00000566292 RETP07949 1114 aa19.46■□□□□ 0.71
USB1-213ENST00000566292 SGSM1Q2NKQ1 1148 aa19.46■□□□□ 0.71
USB1-213ENST00000566292 GAB4Q2WGN9 574 aa19.46■□□□□ 0.71
USB1-213ENST00000566292 SPOPLQ6IQ16 392 aa19.46■□□□□ 0.71
USB1-213ENST00000566292 KRBA2Q6ZNG9 492 aa19.46■□□□□ 0.71
USB1-213ENST00000566292 DGLUCYQ7Z3D6 616 aa19.46■□□□□ 0.71
USB1-213ENST00000566292 ACOT1Q86TX2 421 aa19.46■□□□□ 0.71
USB1-213ENST00000566292 TNIP3Q96KP6 325 aa19.46■□□□□ 0.71
USB1-213ENST00000566292 SLITRK1Q96PX8 696 aa19.46■□□□□ 0.71
USB1-213ENST00000566292 HMGXB4Q9UGU5 601 aa19.46■□□□□ 0.71
USB1-213ENST00000566292 FRMD4BQ9Y2L6 1034 aa19.46■□□□□ 0.71
USB1-213ENST00000566292 ATP8B3O60423 1300 aa19.46■□□□□ 0.71
USB1-213ENST00000566292 TNFRSF10BO14763 440 aa19.45■□□□□ 0.7
USB1-213ENST00000566292 IKBKBO14920 756 aa19.45■□□□□ 0.7
USB1-213ENST00000566292 MAPK13O15264 365 aa19.45■□□□□ 0.7
USB1-213ENST00000566292 ATG13O75143 517 aa19.45■□□□□ 0.7
USB1-213ENST00000566292 NFATC1O95644 943 aa19.45■□□□□ 0.7
USB1-213ENST00000566292 ASS1P00966 412 aaKnown RBP19.45■□□□□ 0.7
USB1-213ENST00000566292 YWHAQP27348 245 aa19.45■□□□□ 0.7
USB1-213ENST00000566292 OPRD1P41143 372 aa19.45■□□□□ 0.7
USB1-213ENST00000566292 NR1H3Q13133 447 aa19.45■□□□□ 0.7
USB1-213ENST00000566292 ORC1Q13415 861 aa19.45■□□□□ 0.7
USB1-213ENST00000566292 NFIL3Q16649 462 aa19.45■□□□□ 0.7
USB1-213ENST00000566292 FBXO43Q4G163 708 aa19.45■□□□□ 0.7
USB1-213ENST00000566292 FILIP1Q7Z7B0 1213 aa19.45■□□□□ 0.7
USB1-213ENST00000566292 FUKQ8N0W3 1084 aa19.45■□□□□ 0.7
USB1-213ENST00000566292 RPLP0P6Q8NHW5 317 aa19.45■□□□□ 0.7
USB1-213ENST00000566292 SCAMP5Q8TAC9 235 aa19.45■□□□□ 0.7
USB1-213ENST00000566292 FBXO32Q969P5 355 aa19.45■□□□□ 0.7
USB1-213ENST00000566292 SMARCD1Q96GM5 515 aa19.45■□□□□ 0.7
USB1-213ENST00000566292 MED10Q9BTT4 135 aa19.45■□□□□ 0.7
USB1-213ENST00000566292 SCAND2PQ9GZW5 306 aaPredicted RBP19.45■□□□□ 0.7
USB1-213ENST00000566292 SMPD4Q9NXE4 827 aa19.45■□□□□ 0.7
USB1-213ENST00000566292 IL37Q9NZH6 218 aa19.45■□□□□ 0.7
USB1-213ENST00000566292 SLC8A2Q9UPR5 921 aa19.45■□□□□ 0.7
USB1-213ENST00000566292 MAPK8IP1Q9UQF2 711 aa19.45■□□□□ 0.7
USB1-213ENST00000566292 SCAMP3O14828 347 aaKnown RBP19.44■□□□□ 0.7
USB1-213ENST00000566292 AKAP3O75969 853 aa19.44■□□□□ 0.7
USB1-213ENST00000566292 RTN3O95197 1032 aaPredicted RBP19.44■□□□□ 0.7
USB1-213ENST00000566292 HLA-DRAP01903 254 aa19.44■□□□□ 0.7
USB1-213ENST00000566292 CYP17A1P05093 508 aa19.44■□□□□ 0.7
USB1-213ENST00000566292 P4HA1P13674 534 aa19.44■□□□□ 0.7
USB1-213ENST00000566292 CCDC130P13994 396 aa19.44■□□□□ 0.7
USB1-213ENST00000566292 NR2F2P24468 414 aa19.44■□□□□ 0.7
USB1-213ENST00000566292 PIK3CAP42336 1068 aa19.44■□□□□ 0.7
USB1-213ENST00000566292 ASPAP45381 313 aa19.44■□□□□ 0.7
USB1-213ENST00000566292 VAMP7P51809 220 aa19.44■□□□□ 0.7
USB1-213ENST00000566292 SLC5A3P53794 718 aa19.44■□□□□ 0.7
USB1-213ENST00000566292 LMNB2Q03252 620 aa19.44■□□□□ 0.7
USB1-213ENST00000566292 CEP68Q76N32 757 aa19.44■□□□□ 0.7
USB1-213ENST00000566292 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.44■□□□□ 0.7
USB1-213ENST00000566292 FAM160A2Q8N612 972 aaPredicted RBP19.44■□□□□ 0.7
USB1-213ENST00000566292 ZMIZ2Q8NF64 920 aa19.44■□□□□ 0.7
USB1-213ENST00000566292 OVCA2Q8WZ82 227 aa19.44■□□□□ 0.7
USB1-213ENST00000566292 TAF4BQ92750 862 aa19.44■□□□□ 0.7
USB1-213ENST00000566292 CCDC47Q96A33 483 aaKnown RBP19.44■□□□□ 0.7
USB1-213ENST00000566292 EXOC4Q96A65 974 aa19.44■□□□□ 0.7
USB1-213ENST00000566292 SMOQ99835 787 aa19.44■□□□□ 0.7
USB1-213ENST00000566292 GDPD2Q9HCC8 539 aa19.44■□□□□ 0.7
USB1-213ENST00000566292 DMAP1Q9NPF5 467 aaPredicted RBP19.44■□□□□ 0.7
USB1-213ENST00000566292 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.44■□□□□ 0.75e-9■■■■■ 51.3
USB1-213ENST00000566292 KRT82Q9NSB4 513 aa19.44■□□□□ 0.7
USB1-213ENST00000566292 ATP6V1DQ9Y5K8 247 aa19.44■□□□□ 0.7
USB1-213ENST00000566292 CCDC163A0A0D9SF12 145 aa19.43■□□□□ 0.7
USB1-213ENST00000566292 AP1G2O75843 785 aa19.43■□□□□ 0.7
USB1-213ENST00000566292 BEST1O76090 585 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms