RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 OR13H1Q8NG92 308 aa11.3□□□□□ -0.6
UBFD1-205ENST00000566136 PCDH19Q8TAB3 1148 aa11.3□□□□□ -0.6
UBFD1-205ENST00000566136 PDE7BQ9NP56 450 aa11.3□□□□□ -0.6
UBFD1-205ENST00000566136 PNPLA8Q9NP80 782 aa11.3□□□□□ -0.6
UBFD1-205ENST00000566136 GPRC5CQ9NQ84 441 aa11.3□□□□□ -0.6
UBFD1-205ENST00000566136 EIF2B3Q9NR50 452 aaKnown RBP11.3□□□□□ -0.6
UBFD1-205ENST00000566136 TMEFF2Q9UIK5 374 aaPredicted RBP11.3□□□□□ -0.6
UBFD1-205ENST00000566136 RASAL2Q9UJF2 1139 aa11.3□□□□□ -0.6
UBFD1-205ENST00000566136 CCDC154A6NI56 674 aa11.29□□□□□ -0.6
UBFD1-205ENST00000566136 YDJCA8MPS7 323 aa11.29□□□□□ -0.6
UBFD1-205ENST00000566136 H0YC42 278 aa11.29□□□□□ -0.6
UBFD1-205ENST00000566136 DVL2O14641 736 aa11.29□□□□□ -0.6
UBFD1-205ENST00000566136 RIMBP2O15034 1052 aa11.29□□□□□ -0.6
UBFD1-205ENST00000566136 HSPA1AP0DMV8 641 aaKnown RBP11.29□□□□□ -0.6
UBFD1-205ENST00000566136 HSPA1BP0DMV9 641 aaKnown RBP11.29□□□□□ -0.6
UBFD1-205ENST00000566136 TNNT1P13805 278 aa11.29□□□□□ -0.6
UBFD1-205ENST00000566136 PAMP19021 973 aa11.29□□□□□ -0.6
UBFD1-205ENST00000566136 KRT2P35908 639 aa11.29□□□□□ -0.6
UBFD1-205ENST00000566136 GMPSP49915 693 aaPredicted RBP11.29□□□□□ -0.6
UBFD1-205ENST00000566136 RGS9BPQ6ZS82 235 aa11.29□□□□□ -0.6
UBFD1-205ENST00000566136 TMTC3Q6ZXV5 915 aa11.29□□□□□ -0.6
UBFD1-205ENST00000566136 PHACTR4Q8IZ21 702 aa11.29□□□□□ -0.6
UBFD1-205ENST00000566136 GDAP1Q8TB36 358 aa11.29□□□□□ -0.6
UBFD1-205ENST00000566136 DPF2Q92785 391 aa11.29□□□□□ -0.6
UBFD1-205ENST00000566136 CCDC114Q96M63 670 aa11.29□□□□□ -0.6
UBFD1-205ENST00000566136 PHF20Q9BVI0 1012 aa11.29□□□□□ -0.6
UBFD1-205ENST00000566136 OPA3Q9H6K4 179 aa11.29□□□□□ -0.6
UBFD1-205ENST00000566136 CAMK2AQ9UQM7 478 aa11.29□□□□□ -0.6
UBFD1-205ENST00000566136 CNTNAP5Q8WYK1 1306 aa11.29□□□□□ -0.6
UBFD1-205ENST00000566136 IRS2Q9Y4H2 1338 aa11.29□□□□□ -0.6
UBFD1-205ENST00000566136 DCDC2CA8MYV0 355 aa11.29□□□□□ -0.6
UBFD1-205ENST00000566136 MAPK3P27361 379 aaPredicted RBP11.29□□□□□ -0.6
UBFD1-205ENST00000566136 MTNR1BP49286 362 aa11.29□□□□□ -0.6
UBFD1-205ENST00000566136 SULT1E1P49888 294 aa11.29□□□□□ -0.6
UBFD1-205ENST00000566136 RELBQ01201 579 aa11.29□□□□□ -0.6
UBFD1-205ENST00000566136 IL10RAQ13651 578 aa11.29□□□□□ -0.6
UBFD1-205ENST00000566136 ADIPOQQ15848 244 aa11.29□□□□□ -0.6
UBFD1-205ENST00000566136 IYDQ6PHW0 289 aa11.29□□□□□ -0.6
UBFD1-205ENST00000566136 MAMDC2Q7Z304 686 aaPredicted RBP11.29□□□□□ -0.6
UBFD1-205ENST00000566136 POTEDQ86YR6 584 aa11.29□□□□□ -0.6
UBFD1-205ENST00000566136 SH2D3CQ8N5H7 860 aa11.29□□□□□ -0.6
UBFD1-205ENST00000566136 GPBAR1Q8TDU6 330 aa11.29□□□□□ -0.6
UBFD1-205ENST00000566136 TBC1D22AQ8WUA7 517 aa11.29□□□□□ -0.6
UBFD1-205ENST00000566136 DYNLL2Q96FJ2 89 aa11.29□□□□□ -0.6
UBFD1-205ENST00000566136 LRRC46Q96FV0 321 aa11.29□□□□□ -0.6
UBFD1-205ENST00000566136 EYA3Q99504 573 aa11.29□□□□□ -0.6
UBFD1-205ENST00000566136 GPRC5DQ9NZD1 345 aa11.29□□□□□ -0.6
UBFD1-205ENST00000566136 CGGBP1Q9UFW8 167 aaPredicted RBP11.29□□□□□ -0.6
UBFD1-205ENST00000566136 POLLQ9UGP5 575 aa11.29□□□□□ -0.6
UBFD1-205ENST00000566136 PCSK1NQ9UHG2 260 aa11.29□□□□□ -0.6
UBFD1-205ENST00000566136 LRRC37AA6NMS7 1700 aa11.28□□□□□ -0.6
UBFD1-205ENST00000566136 PI4K2BG5E9Z4 385 aa11.28□□□□□ -0.6
UBFD1-205ENST00000566136 DIAPH2O60879 1101 aa11.28□□□□□ -0.6
UBFD1-205ENST00000566136 IL18RAPO95256 599 aa11.28□□□□□ -0.6
UBFD1-205ENST00000566136 CSF1P09603 554 aa11.28□□□□□ -0.6
UBFD1-205ENST00000566136 CSH1P0DML2 217 aa11.28□□□□□ -0.6
UBFD1-205ENST00000566136 CSH2P0DML3 217 aa11.28□□□□□ -0.6
UBFD1-205ENST00000566136 TOP1P11387 765 aaKnown RBP11.28□□□□□ -0.6
UBFD1-205ENST00000566136 SMAD3P84022 425 aaKnown RBP11.28□□□□□ -0.6
UBFD1-205ENST00000566136 UBE3AQ05086 875 aa11.28□□□□□ -0.6
UBFD1-205ENST00000566136 ZNF174Q15697 407 aa11.28□□□□□ -0.6
UBFD1-205ENST00000566136 CCDC157Q569K6 752 aa11.28□□□□□ -0.6
UBFD1-205ENST00000566136 NXPE3Q969Y0 559 aa11.28□□□□□ -0.6
UBFD1-205ENST00000566136 SLC39A3Q9BRY0 314 aa11.28□□□□□ -0.6
UBFD1-205ENST00000566136 PRDM6Q9NQX0 595 aa11.28□□□□□ -0.6
UBFD1-205ENST00000566136 RBM28Q9NW13 759 aaKnown RBP11.28□□□□□ -0.6
UBFD1-205ENST00000566136 MAN1B1Q9UKM7 699 aa11.28□□□□□ -0.6
UBFD1-205ENST00000566136 SRPRBQ9Y5M8 271 aaKnown RBP11.28□□□□□ -0.6
UBFD1-205ENST00000566136 LAMB1P07942 1786 aa11.28□□□□□ -0.6
UBFD1-205ENST00000566136 CNTNAP1P78357 1384 aa11.28□□□□□ -0.6
UBFD1-205ENST00000566136 PDS5AQ29RF7 1337 aaKnown RBP11.28□□□□□ -0.6
UBFD1-205ENST00000566136 DDX39AO00148 427 aaKnown RBP11.28□□□□□ -0.6
UBFD1-205ENST00000566136 SYT5O00445 386 aa11.28□□□□□ -0.6
UBFD1-205ENST00000566136 IKBKBO14920 756 aa11.28□□□□□ -0.6
UBFD1-205ENST00000566136 NEMFO60524 1076 aa11.28□□□□□ -0.6
UBFD1-205ENST00000566136 FTCDO95954 541 aa11.28□□□□□ -0.6
UBFD1-205ENST00000566136 CYP1A2P05177 515 aa11.28□□□□□ -0.6
UBFD1-205ENST00000566136 BRAFP15056 766 aa11.28□□□□□ -0.6
UBFD1-205ENST00000566136 MAP2K6P52564 334 aa11.28□□□□□ -0.6
UBFD1-205ENST00000566136 SLC26A5P58743 744 aa11.28□□□□□ -0.6
UBFD1-205ENST00000566136 CCNA1P78396 465 aa11.28□□□□□ -0.6
UBFD1-205ENST00000566136 FMO1Q01740 532 aa11.28□□□□□ -0.6
UBFD1-205ENST00000566136 MYL5Q02045 173 aa11.28□□□□□ -0.6
UBFD1-205ENST00000566136 MAP4K2Q12851 820 aa11.28□□□□□ -0.6
UBFD1-205ENST00000566136 EIF2B5Q13144 721 aaKnown RBP11.28□□□□□ -0.6
UBFD1-205ENST00000566136 ARMCX5Q6P1M9 558 aa11.28□□□□□ -0.6
UBFD1-205ENST00000566136 USP50Q70EL3 339 aaPredicted RBP11.28□□□□□ -0.6
UBFD1-205ENST00000566136 RRAGAQ7L523 313 aa11.28□□□□□ -0.6
UBFD1-205ENST00000566136 OVCH1Q7RTY7 1134 aa11.28□□□□□ -0.6
UBFD1-205ENST00000566136 SLFN11Q7Z7L1 901 aa11.28□□□□□ -0.6
UBFD1-205ENST00000566136 CTCFLQ8NI51 663 aaPredicted RBP11.28□□□□□ -0.6
UBFD1-205ENST00000566136 RHBDD1Q8TEB9 315 aa11.28□□□□□ -0.6
UBFD1-205ENST00000566136 NCSTNQ92542 709 aa11.28□□□□□ -0.6
UBFD1-205ENST00000566136 EPSTI1Q96J88 318 aa11.28□□□□□ -0.6
UBFD1-205ENST00000566136 FAM210AQ96ND0 272 aa11.28□□□□□ -0.6
UBFD1-205ENST00000566136 ABHD1Q96SE0 405 aa11.28□□□□□ -0.6
UBFD1-205ENST00000566136 ARPP21Q9UBL0 812 aaPredicted RBP11.28□□□□□ -0.6
UBFD1-205ENST00000566136 NAALADL1Q9UQQ1 740 aa11.28□□□□□ -0.6
UBFD1-205ENST00000566136 SERPINC1P01008 464 aa11.27□□□□□ -0.61
UBFD1-205ENST00000566136 CALM1P0DP23 149 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms