RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 ZMYND10O75800 440 aa8.2□□□□□ -1.1
CDH1-208ENST00000565810 SOAT2O75908 522 aa8.2□□□□□ -1.1
CDH1-208ENST00000565810 LCA5LO95447 670 aa8.2□□□□□ -1.1
CDH1-208ENST00000565810 VNN2O95498 520 aa8.2□□□□□ -1.1
CDH1-208ENST00000565810 HNRNPA1P09651 372 aaKnown RBP eCLIP8.2□□□□□ -1.1
CDH1-208ENST00000565810 EPCAMP16422 314 aa8.2□□□□□ -1.1
CDH1-208ENST00000565810 POU3F3P20264 500 aaPredicted RBP8.2□□□□□ -1.1
CDH1-208ENST00000565810 MMP8P22894 467 aa8.2□□□□□ -1.1
CDH1-208ENST00000565810 YWHAQP27348 245 aa8.2□□□□□ -1.1
CDH1-208ENST00000565810 HOXA9P31269 272 aa8.2□□□□□ -1.1
CDH1-208ENST00000565810 GPR15P49685 360 aa8.2□□□□□ -1.1
CDH1-208ENST00000565810 TKTL1P51854 596 aa8.2□□□□□ -1.1
CDH1-208ENST00000565810 SLC5A3P53794 718 aa8.2□□□□□ -1.1
CDH1-208ENST00000565810 CACNA2D1P54289 1103 aa8.2□□□□□ -1.1
CDH1-208ENST00000565810 GPC5P78333 572 aa8.2□□□□□ -1.1
CDH1-208ENST00000565810 CCZ1BP86790 482 aa8.2□□□□□ -1.1
CDH1-208ENST00000565810 CCZ1P86791 482 aaPredicted RBP8.2□□□□□ -1.1
CDH1-208ENST00000565810 IFRD2Q12894 506 aaPredicted RBP8.2□□□□□ -1.1
CDH1-208ENST00000565810 SDHAF4Q5VUM1 108 aa8.2□□□□□ -1.1
CDH1-208ENST00000565810 OR6B2Q6IFH4 312 aa8.2□□□□□ -1.1
CDH1-208ENST00000565810 RAD9BQ6WBX8 426 aa8.2□□□□□ -1.1
CDH1-208ENST00000565810 MMS22LQ6ZRQ5 1243 aa8.2□□□□□ -1.1
CDH1-208ENST00000565810 TOGARAM2Q6ZUX3 1019 aa8.2□□□□□ -1.1
CDH1-208ENST00000565810 TMEM110Q86TL2 294 aa8.2□□□□□ -1.1
CDH1-208ENST00000565810 TMEM139Q8IV31 216 aa8.2□□□□□ -1.1
CDH1-208ENST00000565810 MCOLN2Q8IZK6 566 aa8.2□□□□□ -1.1
CDH1-208ENST00000565810 ZMIZ2Q8NF64 920 aa8.2□□□□□ -1.1
CDH1-208ENST00000565810 CTNNBL1Q8WYA6 563 aaPredicted RBP8.2□□□□□ -1.1
CDH1-208ENST00000565810 GOLGA1Q92805 767 aa8.2□□□□□ -1.1
CDH1-208ENST00000565810 ZNF830Q96NB3 372 aaPredicted RBP8.2□□□□□ -1.1
CDH1-208ENST00000565810 SLITRK1Q96PX8 696 aa8.2□□□□□ -1.1
CDH1-208ENST00000565810 CPXM1Q96SM3 734 aa8.2□□□□□ -1.1
CDH1-208ENST00000565810 C11orf70Q9BRQ4 267 aa8.2□□□□□ -1.1
CDH1-208ENST00000565810 SLC4A5Q9BY07 1137 aa8.2□□□□□ -1.1
CDH1-208ENST00000565810 ZDHHC7Q9NXF8 308 aa8.2□□□□□ -1.1
CDH1-208ENST00000565810 TAS2R14Q9NYV8 317 aa8.2□□□□□ -1.1
CDH1-208ENST00000565810 UXTQ9UBK9 157 aaPredicted RBP8.2□□□□□ -1.1
CDH1-208ENST00000565810 INTUQ9ULD6 942 aa8.2□□□□□ -1.1
CDH1-208ENST00000565810 MAGED2Q9UNF1 606 aaPredicted RBP8.2□□□□□ -1.1
CDH1-208ENST00000565810 PCDHA13Q9Y5I0 950 aa8.2□□□□□ -1.1
CDH1-208ENST00000565810 MTCH2Q9Y6C9 303 aa8.2□□□□□ -1.1
CDH1-208ENST00000565810 PTPRSQ13332 1948 aa8.2□□□□□ -1.1
CDH1-208ENST00000565810 SLC38A8A6NNN8 435 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 PIK3R2O00459 728 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 CCL16O15467 120 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 CCP110O43303 1012 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 ZSCAN12O43309 604 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 ZBED1O96006 694 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 CCDC175P0C221 793 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 TMEM253P0C7T8 217 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 HOXB8P17481 243 aaPredicted RBP8.19□□□□□ -1.1
CDH1-208ENST00000565810 ABCB4P21439 1286 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 GABRB2P47870 512 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 RPL34P49207 117 aaKnown RBP8.19□□□□□ -1.1
CDH1-208ENST00000565810 GALCP54803 685 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 ADIGQ0VDE8 80 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 HYAL1Q12794 435 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 KIF5AQ12840 1032 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 ZNF268Q14587 947 aaPredicted RBP8.19□□□□□ -1.1
CDH1-208ENST00000565810 MTF1Q14872 753 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 PTPN20Q4JDL3 420 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 HS1BP3Q53T59 392 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 RAB41Q5JT25 222 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 EFHC1Q5JVL4 640 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 CYP4A22Q5TCH4 519 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 DNAJC24Q6P3W2 148 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 DCUN1D2Q6PH85 259 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 TMEM184AQ6ZMB5 413 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 EP400NLQ6ZTU2 488 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 DNAJB7Q7Z6W7 309 aaPredicted RBP8.19□□□□□ -1.1
CDH1-208ENST00000565810 SCUBE3Q8IX30 993 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 ARHGAP18Q8N392 663 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 MICALL1Q8N3F8 863 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 TTC9BQ8N6N2 239 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 EFHBQ8N7U6 833 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 PDZD8Q8NEN9 1154 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 GPR152Q8TDT2 470 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 FBXO32Q969P5 355 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 PSMG2Q969U7 264 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 ZNF653Q96CK0 615 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 GCNAQ96QF7 691 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 TRIM62Q9BVG3 475 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 SELENOOQ9BVL4 669 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 ULBP1Q9BZM6 244 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 SFXN1Q9H9B4 322 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 PIDD1Q9HB75 910 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 MRPL47Q9HD33 250 aaKnown RBP8.19□□□□□ -1.1
CDH1-208ENST00000565810 PARVAQ9NVD7 372 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 CNOT8Q9UFF9 292 aaKnown RBP8.19□□□□□ -1.1
CDH1-208ENST00000565810 CYTH4Q9UIA0 394 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 USP3Q9Y6I4 520 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 SCINQ9Y6U3 715 aa8.19□□□□□ -1.1
CDH1-208ENST00000565810 CHD7Q9P2D1 2997 aa8.18□□□□□ -1.1
CDH1-208ENST00000565810 CCDC195A0A1B0GUA6 201 aa8.18□□□□□ -1.1
CDH1-208ENST00000565810 FAM170AA1A519 330 aa8.18□□□□□ -1.1
CDH1-208ENST00000565810 HHLA1C9JL84 531 aa8.18□□□□□ -1.1
CDH1-208ENST00000565810 GOLGA8SH3BPF8 625 aa8.18□□□□□ -1.1
CDH1-208ENST00000565810 TNFRSF10BO14763 440 aa8.18□□□□□ -1.1
CDH1-208ENST00000565810 CAPN9O14815 690 aa8.18□□□□□ -1.1
CDH1-208ENST00000565810 PAPSS1O43252 624 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms