RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 C2CD2LO14523 706 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 CIB2O75838 187 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 MPOP05164 745 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 SPATA31D3P0C874 917 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 GUCY2CP25092 1073 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 QARSP47897 775 aaKnown RBP3.5□□□□□ -1.85
CHD9-213ENST00000564845 NDUFV1P49821 464 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 PITX1P78337 314 aaPredicted RBP3.5□□□□□ -1.85
CHD9-213ENST00000564845 NEDD9Q14511 834 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 CXCL17Q6UXB2 119 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 SPATA31D4Q6ZUB0 917 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 LPCAT2Q7L5N7 544 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 RGPD4Q7Z3J3 1758 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 TLR10Q9BXR5 811 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 SNTG2Q9NY99 539 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 UBP1Q9NZI7 540 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 MEFVO15553 781 aaPredicted RBP3.5□□□□□ -1.85
CHD9-213ENST00000564845 SPAG7O75391 227 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 AMHP03971 560 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 MYL3P08590 195 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 ADORA2BP29275 332 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 ALDH5A1P51649 535 aaPredicted RBP3.5□□□□□ -1.85
CHD9-213ENST00000564845 ZNF157P51786 506 aaPredicted RBP3.5□□□□□ -1.85
CHD9-213ENST00000564845 MAP3K7CLP57077 242 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 PLCB3Q01970 1234 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 CAPSQ13938 189 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 GRM3Q14832 879 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 TCEA2Q15560 299 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 CLEC16AQ2KHT3 1053 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 CASKIN2Q8WXE0 1202 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 ALG3Q92685 438 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 SLC5A5Q92911 643 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 MBOAT7Q96N66 472 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 JPH1Q9HDC5 661 aaPredicted RBP3.5□□□□□ -1.85
CHD9-213ENST00000564845 SLC38A7Q9NVC3 462 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 NAGPAQ9UK23 515 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 K7ERI5 159 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 FSCN2O14926 492 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 DYRK3O43781 588 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 RNF40O75150 1001 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 PPP1R37O75864 691 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 KRT37O76014 449 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 GTF2A1P52655 376 aaPredicted RBP3.5□□□□□ -1.85
CHD9-213ENST00000564845 ZKSCAN8Q15776 578 aaPredicted RBP3.5□□□□□ -1.85
CHD9-213ENST00000564845 AASDHQ4L235 1098 aaPredicted RBP3.5□□□□□ -1.85
CHD9-213ENST00000564845 ZNF544Q6NX49 715 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 SV2AQ7L0J3 742 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 UNC5BQ8IZJ1 945 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 PYROXD2Q8N2H3 581 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 C1orf131Q8NDD1 294 aaKnown RBP3.5□□□□□ -1.85
CHD9-213ENST00000564845 DEPDC1BQ8WUY9 529 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 MYLIPQ8WY64 445 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 ACAP3Q96P50 834 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 EML4Q9HC35 981 aaKnown RBP3.5□□□□□ -1.85
CHD9-213ENST00000564845 RRN3Q9NYV6 651 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 CYTH4Q9UIA0 394 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 ABT1Q9ULW3 272 aaKnown RBP3.5□□□□□ -1.85
CHD9-213ENST00000564845 ACTL7AQ9Y615 435 aa3.5□□□□□ -1.85
CHD9-213ENST00000564845 LTBP3Q9NS15 1303 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 CASTOR2A6NHX0 329 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 TM9SF1O15321 606 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 FAM155BO75949 473 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 KRT38O76015 456 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 CHKAP35790 457 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 EPHA7Q15375 998 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 TRIP4Q15650 581 aaPredicted RBP3.49□□□□□ -1.85
CHD9-213ENST00000564845 SPRED3Q2MJR0 410 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 ITPRIPL1Q6GPH6 555 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 BPIFA3Q9BQP9 254 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 THAP9Q9H5L6 903 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 CXorf56Q9H5V9 222 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 STN1Q9H668 368 aaKnown RBP3.49□□□□□ -1.85
CHD9-213ENST00000564845 SYNDIG1Q9H7V2 258 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 KLHL33A6NCF5 533 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 AGRPO00253 132 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 TREHO43280 583 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 CALB1P05937 261 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 RRM1P23921 792 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 CNTFP26441 200 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 PSMC2P35998 433 aaKnown RBP3.49□□□□□ -1.85
CHD9-213ENST00000564845 RECQLP46063 649 aaPredicted RBP3.49□□□□□ -1.85
CHD9-213ENST00000564845 NSFP46459 744 aaKnown RBP3.49□□□□□ -1.85
CHD9-213ENST00000564845 RAB27AP51159 221 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 EFNA5P52803 228 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 SEMG2Q02383 582 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 PLA2G4EQ3MJ16 856 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 ZNF568Q3ZCX4 644 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 C6orf118Q5T5N4 469 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 SNX30Q5VWJ9 437 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 LRRC31Q6UY01 552 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 MMS22LQ6ZRQ5 1243 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 MCEEQ96PE7 176 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 TMEM121Q9BTD3 319 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 SNX25Q9H3E2 840 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 ZNF302Q9NR11 478 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 TLR9Q9NR96 1032 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 R3HDM2Q9Y2K5 976 aaKnown RBP3.49□□□□□ -1.85
CHD9-213ENST00000564845 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.49□□□□□ -1.85
CHD9-213ENST00000564845 CCL15-CCL14A0A0B4J2E2 113 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 SPDYE5A6NIY4 337 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms