RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 USP46P62068 366 aa16.87■□□□□ 0.29
RAB40C-208ENST00000564703 CYP4F8P98187 520 aa16.87■□□□□ 0.29
RAB40C-208ENST00000564703 DPY19L2P1Q6NXN4 242 aa16.87■□□□□ 0.29
RAB40C-208ENST00000564703 MAB21L3Q8N8X9 362 aa16.87■□□□□ 0.29
RAB40C-208ENST00000564703 SCAMP5Q8TAC9 235 aa16.87■□□□□ 0.29
RAB40C-208ENST00000564703 ZSCAN18Q8TBC5 510 aaPredicted RBP16.87■□□□□ 0.29
RAB40C-208ENST00000564703 OVCA2Q8WZ82 227 aa16.87■□□□□ 0.29
RAB40C-208ENST00000564703 SMARCD2Q92925 531 aa16.87■□□□□ 0.29
RAB40C-208ENST00000564703 E2F7Q96AV8 911 aa16.87■□□□□ 0.29
RAB40C-208ENST00000564703 NAP1L5Q96NT1 182 aaPredicted RBP16.87■□□□□ 0.29
RAB40C-208ENST00000564703 LRRC4Q9HBW1 653 aa16.87■□□□□ 0.29
RAB40C-208ENST00000564703 NLRC4Q9NPP4 1024 aa16.87■□□□□ 0.29
RAB40C-208ENST00000564703 CHORDC1Q9UHD1 332 aaPredicted RBP16.87■□□□□ 0.29
RAB40C-208ENST00000564703 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.87■□□□□ 0.29
RAB40C-208ENST00000564703 SIK3Q9Y2K2 1263 aa16.87■□□□□ 0.29
RAB40C-208ENST00000564703 A0A1B0GTH6 734 aa16.86■□□□□ 0.29
RAB40C-208ENST00000564703 M0QYV0 167 aa16.86■□□□□ 0.29
RAB40C-208ENST00000564703 XPO1O14980 1071 aaKnown RBP16.86■□□□□ 0.29
RAB40C-208ENST00000564703 ALADP13716 330 aa16.86■□□□□ 0.29
RAB40C-208ENST00000564703 STAT1P42224 750 aa16.86■□□□□ 0.29
RAB40C-208ENST00000564703 PDE4CQ08493 712 aa16.86■□□□□ 0.29
RAB40C-208ENST00000564703 TDGQ13569 410 aa16.86■□□□□ 0.29
RAB40C-208ENST00000564703 NR1I3Q14994 352 aa16.86■□□□□ 0.29
RAB40C-208ENST00000564703 FAM78AQ5JUQ0 283 aa16.86■□□□□ 0.29
RAB40C-208ENST00000564703 TXNDC8Q6A555 127 aa16.86■□□□□ 0.29
RAB40C-208ENST00000564703 PARM1Q6UWI2 310 aa16.86■□□□□ 0.29
RAB40C-208ENST00000564703 PIGZQ86VD9 579 aa16.86■□□□□ 0.29
RAB40C-208ENST00000564703 MON1AQ86VX9 555 aa16.86■□□□□ 0.29
RAB40C-208ENST00000564703 ARID3BQ8IVW6 561 aaPredicted RBP16.86■□□□□ 0.29
RAB40C-208ENST00000564703 FAM71AQ8IYT1 594 aa16.86■□□□□ 0.29
RAB40C-208ENST00000564703 RNF214Q8ND24 703 aa16.86■□□□□ 0.29
RAB40C-208ENST00000564703 ZSWIM3Q96MP5 696 aa16.86■□□□□ 0.29
RAB40C-208ENST00000564703 NAA15Q9BXJ9 866 aaKnown RBP16.86■□□□□ 0.29
RAB40C-208ENST00000564703 SLC46A2Q9BY10 475 aa16.86■□□□□ 0.29
RAB40C-208ENST00000564703 TRPC7Q9HCX4 862 aa16.86■□□□□ 0.29
RAB40C-208ENST00000564703 TLR8Q9NR97 1041 aaKnown RBP16.86■□□□□ 0.29
RAB40C-208ENST00000564703 DENND4AQ7Z401 1863 aa16.86■□□□□ 0.29
RAB40C-208ENST00000564703 NCOR1O75376 2440 aa16.85■□□□□ 0.29
RAB40C-208ENST00000564703 TRAV19A0A0A6YYK7 116 aa16.85■□□□□ 0.29
RAB40C-208ENST00000564703 A0A1W2PQC6 194 aa16.85■□□□□ 0.29
RAB40C-208ENST00000564703 ANHXE9PGG2 379 aa16.85■□□□□ 0.29
RAB40C-208ENST00000564703 CALCAP01258 141 aa16.85■□□□□ 0.29
RAB40C-208ENST00000564703 ASGR2P07307 311 aa16.85■□□□□ 0.29
RAB40C-208ENST00000564703 PFKLP17858 780 aa16.85■□□□□ 0.29
RAB40C-208ENST00000564703 HDCP19113 662 aa16.85■□□□□ 0.29
RAB40C-208ENST00000564703 CLCN1P35523 988 aa16.85■□□□□ 0.29
RAB40C-208ENST00000564703 KIF11P52732 1056 aa16.85■□□□□ 0.29
RAB40C-208ENST00000564703 TMEM150AQ86TG1 271 aa16.85■□□□□ 0.29
RAB40C-208ENST00000564703 TTC30AQ86WT1 665 aa16.85■□□□□ 0.29
RAB40C-208ENST00000564703 CMTM8Q8IZV2 173 aa16.85■□□□□ 0.29
RAB40C-208ENST00000564703 SLC44A3Q8N4M1 653 aa16.85■□□□□ 0.29
RAB40C-208ENST00000564703 ASB16Q96NS5 453 aa16.85■□□□□ 0.29
RAB40C-208ENST00000564703 GANQ9H2C0 597 aa16.85■□□□□ 0.29
RAB40C-208ENST00000564703 IL37Q9NZH6 218 aa16.85■□□□□ 0.29
RAB40C-208ENST00000564703 AJAP1Q9UKB5 411 aaPredicted RBP16.85■□□□□ 0.29
RAB40C-208ENST00000564703 SORCS3Q9UPU3 1222 aa16.85■□□□□ 0.29
RAB40C-208ENST00000564703 CEP83Q9Y592 693 aa16.85■□□□□ 0.29
RAB40C-208ENST00000564703 NUMBLQ9Y6R0 609 aa16.85■□□□□ 0.29
RAB40C-208ENST00000564703 DOCK8Q8NF50 2099 aa16.85■□□□□ 0.29
RAB40C-208ENST00000564703 GREB1Q4ZG55 1949 aa16.84■□□□□ 0.29
RAB40C-208ENST00000564703 ZNF840PA6NDX5 716 aa16.84■□□□□ 0.29
RAB40C-208ENST00000564703 HHLA1C9JL84 531 aa16.84■□□□□ 0.29
RAB40C-208ENST00000564703 DLL1O00548 723 aa16.84■□□□□ 0.29
RAB40C-208ENST00000564703 CBFA2T2O43439 604 aa16.84■□□□□ 0.29
RAB40C-208ENST00000564703 ECI2O75521 394 aa16.84■□□□□ 0.29
RAB40C-208ENST00000564703 USP17L7P0C7H9 530 aa16.84■□□□□ 0.29
RAB40C-208ENST00000564703 CCDC172P0C7W6 258 aa16.84■□□□□ 0.29
RAB40C-208ENST00000564703 WEE1P30291 646 aa16.84■□□□□ 0.29
RAB40C-208ENST00000564703 TKTL1P51854 596 aa16.84■□□□□ 0.29
RAB40C-208ENST00000564703 SNX16P57768 344 aa16.84■□□□□ 0.29
RAB40C-208ENST00000564703 PLCB2Q00722 1185 aa16.84■□□□□ 0.29
RAB40C-208ENST00000564703 HTR4Q13639 388 aa16.84■□□□□ 0.29
RAB40C-208ENST00000564703 PTPN21Q16825 1174 aa16.84■□□□□ 0.29
RAB40C-208ENST00000564703 STXBP5Q5T5C0 1151 aa16.84■□□□□ 0.29
RAB40C-208ENST00000564703 TANGO2Q6ICL3 276 aa16.84■□□□□ 0.29
RAB40C-208ENST00000564703 GPIHBP1Q8IV16 184 aa16.84■□□□□ 0.29
RAB40C-208ENST00000564703 FMNL3Q8IVF7 1028 aa16.84■□□□□ 0.29
RAB40C-208ENST00000564703 YAF2Q8IY57 180 aa16.84■□□□□ 0.29
RAB40C-208ENST00000564703 SIX6OS1Q8N1H7 587 aa16.84■□□□□ 0.29
RAB40C-208ENST00000564703 ARHGAP18Q8N392 663 aa16.84■□□□□ 0.29
RAB40C-208ENST00000564703 ST13P5Q8NFI4 369 aaPredicted RBP16.84■□□□□ 0.29
RAB40C-208ENST00000564703 SLC35F5Q8WV83 523 aa16.84■□□□□ 0.29
RAB40C-208ENST00000564703 RSAD2Q8WXG1 361 aa16.84■□□□□ 0.29
RAB40C-208ENST00000564703 FGF14Q92915 247 aa16.84■□□□□ 0.29
RAB40C-208ENST00000564703 SECISBP2LQ93073 1101 aaKnown RBP16.84■□□□□ 0.29
RAB40C-208ENST00000564703 ELSPBP1Q96BH3 223 aa16.84■□□□□ 0.29
RAB40C-208ENST00000564703 HSFY1Q96LI6 401 aa16.84■□□□□ 0.29
RAB40C-208ENST00000564703 NACA2Q9H009 215 aa16.84■□□□□ 0.29
RAB40C-208ENST00000564703 IFNKQ9P0W0 207 aa16.84■□□□□ 0.29
RAB40C-208ENST00000564703 MUTYHQ9UIF7 546 aa16.84■□□□□ 0.29
RAB40C-208ENST00000564703 SCML2Q9UQR0 700 aa16.84■□□□□ 0.29
RAB40C-208ENST00000564703 F8VZ95 297 aa16.83■□□□□ 0.28
RAB40C-208ENST00000564703 DCXO43602 365 aa16.83■□□□□ 0.28
RAB40C-208ENST00000564703 GFPT2O94808 682 aa16.83■□□□□ 0.28
RAB40C-208ENST00000564703 CKMP06732 381 aa16.83■□□□□ 0.28
RAB40C-208ENST00000564703 PNMA6AP0CW24 399 aaPredicted RBP16.83■□□□□ 0.28
RAB40C-208ENST00000564703 SOX5P35711 763 aa16.83■□□□□ 0.28
RAB40C-208ENST00000564703 ACADSBP45954 432 aa16.83■□□□□ 0.28
RAB40C-208ENST00000564703 PLA2G4AP47712 749 aa16.83■□□□□ 0.28
RAB40C-208ENST00000564703 PSEN1P49768 467 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms