RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 IL37Q9NZH6 218 aa12.96□□□□□ -0.33
GTF3C1-204ENST00000564664 USP18Q9UMW8 372 aa12.96□□□□□ -0.33
GTF3C1-204ENST00000564664 TRAF3IP3Q9Y228 551 aa12.96□□□□□ -0.33
GTF3C1-204ENST00000564664 DMXL1Q9Y485 3027 aa12.96□□□□□ -0.34
GTF3C1-204ENST00000564664 ANAPC1Q9H1A4 1944 aa12.96□□□□□ -0.34
GTF3C1-204ENST00000564664 OBSL1O75147 1896 aa12.95□□□□□ -0.34
GTF3C1-204ENST00000564664 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.95□□□□□ -0.34
GTF3C1-204ENST00000564664 A0A1B0GVL5 298 aa12.95□□□□□ -0.34
GTF3C1-204ENST00000564664 LRRIQ3A6PVS8 624 aaPredicted RBP12.95□□□□□ -0.34
GTF3C1-204ENST00000564664 LEFTY2O00292 366 aa12.95□□□□□ -0.34
GTF3C1-204ENST00000564664 RNF40O75150 1001 aa12.95□□□□□ -0.34
GTF3C1-204ENST00000564664 EGFP01133 1207 aa12.95□□□□□ -0.34
GTF3C1-204ENST00000564664 NR3C1P04150 777 aa12.95□□□□□ -0.34
GTF3C1-204ENST00000564664 USP46P62068 366 aa12.95□□□□□ -0.34
GTF3C1-204ENST00000564664 DMWDQ09019 674 aa12.95□□□□□ -0.34
GTF3C1-204ENST00000564664 TAF10Q12962 218 aa12.95□□□□□ -0.34
GTF3C1-204ENST00000564664 ZNF699Q32M78 642 aa12.95□□□□□ -0.34
GTF3C1-204ENST00000564664 ZACNQ401N2 412 aa12.95□□□□□ -0.34
GTF3C1-204ENST00000564664 HEATR6Q6AI08 1181 aaKnown RBP12.95□□□□□ -0.34
GTF3C1-204ENST00000564664 SYT13Q7L8C5 426 aa12.95□□□□□ -0.34
GTF3C1-204ENST00000564664 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.95□□□□□ -0.34
GTF3C1-204ENST00000564664 GRAMD1CQ8IYS0 662 aa12.95□□□□□ -0.34
GTF3C1-204ENST00000564664 ADGRG2Q8IZP9 1017 aa12.95□□□□□ -0.34
GTF3C1-204ENST00000564664 CRYBG2Q8N1P7 616 aa12.95□□□□□ -0.34
GTF3C1-204ENST00000564664 PLEKHO2Q8TD55 490 aa12.95□□□□□ -0.34
GTF3C1-204ENST00000564664 GAB3Q8WWW8 586 aa12.95□□□□□ -0.34
GTF3C1-204ENST00000564664 ACDQ96AP0 544 aa12.95□□□□□ -0.34
GTF3C1-204ENST00000564664 DUSP9Q99956 384 aaKnown RBP12.95□□□□□ -0.34
GTF3C1-204ENST00000564664 DNAI2Q9GZS0 605 aa12.95□□□□□ -0.34
GTF3C1-204ENST00000564664 RNF38Q9H0F5 515 aa12.95□□□□□ -0.34
GTF3C1-204ENST00000564664 LINC00597Q9H2U6 94 aa12.95□□□□□ -0.34
GTF3C1-204ENST00000564664 FBRSL1Q9HCM7 1045 aaKnown RBP12.95□□□□□ -0.34
GTF3C1-204ENST00000564664 TBC1D14Q9P2M4 693 aa12.95□□□□□ -0.34
GTF3C1-204ENST00000564664 EBF1Q9UH73 591 aa12.95□□□□□ -0.34
GTF3C1-204ENST00000564664 CDV3Q9UKY7 258 aaKnown RBP12.95□□□□□ -0.34
GTF3C1-204ENST00000564664 NME7Q9Y5B8 376 aa12.95□□□□□ -0.34
GTF3C1-204ENST00000564664 WNT6Q9Y6F9 365 aa12.95□□□□□ -0.34
GTF3C1-204ENST00000564664 A0A1W2PQ27 194 aa12.94□□□□□ -0.34
GTF3C1-204ENST00000564664 A0A1W2PQ64 194 aa12.94□□□□□ -0.34
GTF3C1-204ENST00000564664 A0A1W2PQD8 194 aa12.94□□□□□ -0.34
GTF3C1-204ENST00000564664 RPP40O75818 363 aaKnown RBP12.94□□□□□ -0.34
GTF3C1-204ENST00000564664 RHOBTB3O94955 611 aa12.94□□□□□ -0.34
GTF3C1-204ENST00000564664 OAS1P00973 400 aaKnown RBP12.94□□□□□ -0.34
GTF3C1-204ENST00000564664 RPL13P26373 211 aaKnown RBP12.94□□□□□ -0.34
GTF3C1-204ENST00000564664 CASP4P49662 377 aa12.94□□□□□ -0.34
GTF3C1-204ENST00000564664 TUBP50607 506 aa12.94□□□□□ -0.34
GTF3C1-204ENST00000564664 ATXN1P54253 815 aaKnown RBP12.94□□□□□ -0.34
GTF3C1-204ENST00000564664 SPEM2Q0P670 501 aa12.94□□□□□ -0.34
GTF3C1-204ENST00000564664 NETO1Q8TDF5 533 aa12.94□□□□□ -0.34
GTF3C1-204ENST00000564664 OTUB2Q96DC9 234 aa12.94□□□□□ -0.34
GTF3C1-204ENST00000564664 SMARCD1Q96GM5 515 aa12.94□□□□□ -0.34
GTF3C1-204ENST00000564664 FAXDC2Q96IV6 333 aa12.94□□□□□ -0.34
GTF3C1-204ENST00000564664 ZC3H10Q96K80 434 aaKnown RBP12.94□□□□□ -0.34
GTF3C1-204ENST00000564664 ZNF518BQ9C0D4 1074 aa12.94□□□□□ -0.34
GTF3C1-204ENST00000564664 DPEP3Q9H4B8 488 aa12.94□□□□□ -0.34
GTF3C1-204ENST00000564664 PARD6AQ9NPB6 346 aa12.94□□□□□ -0.34
GTF3C1-204ENST00000564664 DMAP1Q9NPF5 467 aaPredicted RBP12.94□□□□□ -0.34
GTF3C1-204ENST00000564664 SEMA4GQ9NTN9 838 aa12.94□□□□□ -0.34
GTF3C1-204ENST00000564664 C2orf42Q9NWW7 574 aa12.94□□□□□ -0.34
GTF3C1-204ENST00000564664 PTPRDP23468 1912 aa12.94□□□□□ -0.34
GTF3C1-204ENST00000564664 A0A0A0MRY4 1105 aa12.93□□□□□ -0.34
GTF3C1-204ENST00000564664 E2F8A0AVK6 867 aa12.93□□□□□ -0.34
GTF3C1-204ENST00000564664 FAM92AA1XBS5 289 aa12.93□□□□□ -0.34
GTF3C1-204ENST00000564664 TNFRSF10BO14763 440 aa12.93□□□□□ -0.34
GTF3C1-204ENST00000564664 VNN1O95497 513 aa12.93□□□□□ -0.34
GTF3C1-204ENST00000564664 ABL1P00519 1130 aa12.93□□□□□ -0.34
GTF3C1-204ENST00000564664 EIF2DP41214 584 aaKnown RBP12.93□□□□□ -0.34
GTF3C1-204ENST00000564664 RAP1GAPP47736 663 aa12.93□□□□□ -0.34
GTF3C1-204ENST00000564664 CDH8P55286 799 aa12.93□□□□□ -0.34
GTF3C1-204ENST00000564664 MCCD1P59942 119 aaPredicted RBP12.93□□□□□ -0.34
GTF3C1-204ENST00000564664 ZXDBP98169 803 aa12.93□□□□□ -0.34
GTF3C1-204ENST00000564664 LPAL2Q16609 132 aa12.93□□□□□ -0.34
GTF3C1-204ENST00000564664 HSF5Q4G112 596 aaPredicted RBP12.93□□□□□ -0.34
GTF3C1-204ENST00000564664 PREPLQ4J6C6 727 aaPredicted RBP12.93□□□□□ -0.34
GTF3C1-204ENST00000564664 HECTD3Q5T447 861 aa12.93□□□□□ -0.34
GTF3C1-204ENST00000564664 INTS8Q75QN2 995 aaKnown RBP12.93□□□□□ -0.34
GTF3C1-204ENST00000564664 SV2AQ7L0J3 742 aa12.93□□□□□ -0.34
GTF3C1-204ENST00000564664 C11orf74Q86VG3 221 aa12.93□□□□□ -0.34
GTF3C1-204ENST00000564664 FAM160A2Q8N612 972 aaPredicted RBP12.93□□□□□ -0.34
GTF3C1-204ENST00000564664 SPRYD3Q8NCJ5 442 aa12.93□□□□□ -0.34
GTF3C1-204ENST00000564664 FBXO32Q969P5 355 aa12.93□□□□□ -0.34
GTF3C1-204ENST00000564664 MED10Q9BTT4 135 aa12.93□□□□□ -0.34
GTF3C1-204ENST00000564664 FBXO44Q9H4M3 255 aa12.93□□□□□ -0.34
GTF3C1-204ENST00000564664 SMYD3Q9H7B4 428 aa12.93□□□□□ -0.34
GTF3C1-204ENST00000564664 CYP3A43Q9HB55 503 aa12.93□□□□□ -0.34
GTF3C1-204ENST00000564664 CSNK1G1Q9HCP0 422 aa12.93□□□□□ -0.34
GTF3C1-204ENST00000564664 PCDHGA5Q9Y5G8 931 aa12.93□□□□□ -0.34
GTF3C1-204ENST00000564664 CPQQ9Y646 472 aa12.93□□□□□ -0.34
GTF3C1-204ENST00000564664 CLDN5O00501 218 aa12.92□□□□□ -0.34
GTF3C1-204ENST00000564664 AXIN1O15169 862 aa12.92□□□□□ -0.34
GTF3C1-204ENST00000564664 CLSTN1O94985 981 aa12.92□□□□□ -0.34
GTF3C1-204ENST00000564664 APBB3O95704 486 aa12.92□□□□□ -0.34
GTF3C1-204ENST00000564664 ADH1CP00326 375 aa12.92□□□□□ -0.34
GTF3C1-204ENST00000564664 ASS1P00966 412 aaKnown RBP12.92□□□□□ -0.34
GTF3C1-204ENST00000564664 ZDHHC11BP0C7U3 371 aa12.92□□□□□ -0.34
GTF3C1-204ENST00000564664 CCDC192P0DO97 292 aa12.92□□□□□ -0.34
GTF3C1-204ENST00000564664 GTF2H1P32780 548 aa12.92□□□□□ -0.34
GTF3C1-204ENST00000564664 VAMP7P51809 220 aa12.92□□□□□ -0.34
GTF3C1-204ENST00000564664 NDUFA8P51970 172 aa12.92□□□□□ -0.34
GTF3C1-204ENST00000564664 MRPS21P82921 87 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms