RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 MSANTD3Q96H12 275 aa19.45■□□□□ 0.7
SYNGR3-204ENST00000564642 SLC22A12Q96S37 553 aa19.45■□□□□ 0.7
SYNGR3-204ENST00000564642 HNRNPABQ99729 332 aaKnown RBP19.45■□□□□ 0.7
SYNGR3-204ENST00000564642 SRRTQ9BXP5 876 aaKnown RBP19.45■□□□□ 0.7
SYNGR3-204ENST00000564642 C8orf33Q9H7E9 229 aaPredicted RBP19.45■□□□□ 0.7
SYNGR3-204ENST00000564642 GCNT4Q9P109 453 aa19.45■□□□□ 0.7
SYNGR3-204ENST00000564642 DLGAP2Q9P1A6 1054 aa19.45■□□□□ 0.7
SYNGR3-204ENST00000564642 NDRG2Q9UN36 371 aaKnown RBP19.45■□□□□ 0.7
SYNGR3-204ENST00000564642 KIF26AQ9ULI4 1882 aaPredicted RBP19.44■□□□□ 0.7
SYNGR3-204ENST00000564642 ZNF840PA6NDX5 716 aa19.44■□□□□ 0.7
SYNGR3-204ENST00000564642 TARSP26639 723 aaKnown RBP19.44■□□□□ 0.7
SYNGR3-204ENST00000564642 MAGEA9P43362 315 aa19.44■□□□□ 0.7
SYNGR3-204ENST00000564642 FMO5P49326 533 aa19.44■□□□□ 0.7
SYNGR3-204ENST00000564642 SLC5A3P53794 718 aa19.44■□□□□ 0.7
SYNGR3-204ENST00000564642 ANGPT1Q15389 498 aa19.44■□□□□ 0.7
SYNGR3-204ENST00000564642 C1orf228Q6PIY5 440 aa19.44■□□□□ 0.7
SYNGR3-204ENST00000564642 PDZD8Q8NEN9 1154 aa19.44■□□□□ 0.7
SYNGR3-204ENST00000564642 WHAMMQ8TF30 809 aa19.44■□□□□ 0.7
SYNGR3-204ENST00000564642 HEXIM2Q96MH2 286 aaKnown RBP19.44■□□□□ 0.7
SYNGR3-204ENST00000564642 SMOQ99835 787 aa19.44■□□□□ 0.7
SYNGR3-204ENST00000564642 CLSTN2Q9H4D0 955 aa19.44■□□□□ 0.7
SYNGR3-204ENST00000564642 FAM124BQ9H5Z6 455 aaPredicted RBP19.44■□□□□ 0.7
SYNGR3-204ENST00000564642 CSNK1G1Q9HCP0 422 aa19.44■□□□□ 0.7
SYNGR3-204ENST00000564642 CISHQ9NSE2 258 aa19.44■□□□□ 0.7
SYNGR3-204ENST00000564642 COMMD8Q9NX08 183 aa19.44■□□□□ 0.7
SYNGR3-204ENST00000564642 GTSE1Q9NYZ3 720 aa19.44■□□□□ 0.7
SYNGR3-204ENST00000564642 HELZP42694 1942 aaKnown RBP19.43■□□□□ 0.7
SYNGR3-204ENST00000564642 TNFRSF10BO14763 440 aa19.43■□□□□ 0.7
SYNGR3-204ENST00000564642 BEST1O76090 585 aa19.43■□□□□ 0.7
SYNGR3-204ENST00000564642 YWHAEP62258 255 aaKnown RBP19.43■□□□□ 0.7
SYNGR3-204ENST00000564642 TNK2Q07912 1038 aa19.43■□□□□ 0.7
SYNGR3-204ENST00000564642 ITPRIPL2Q3MIP1 535 aa19.43■□□□□ 0.7
SYNGR3-204ENST00000564642 ZMIZ2Q8NF64 920 aa19.43■□□□□ 0.7
SYNGR3-204ENST00000564642 SCAMP5Q8TAC9 235 aa19.43■□□□□ 0.7
SYNGR3-204ENST00000564642 OVCA2Q8WZ82 227 aa19.43■□□□□ 0.7
SYNGR3-204ENST00000564642 TMEM176AQ96HP8 235 aa19.43■□□□□ 0.7
SYNGR3-204ENST00000564642 FBXO44Q9H4M3 255 aa19.43■□□□□ 0.7
SYNGR3-204ENST00000564642 SHISA7A6NL88 538 aa19.42■□□□□ 0.7
SYNGR3-204ENST00000564642 SPECC1L-ADORA2AF8WAN1 911 aa19.42■□□□□ 0.7
SYNGR3-204ENST00000564642 CCDC192P0DO97 292 aa19.42■□□□□ 0.7
SYNGR3-204ENST00000564642 LRMPQ12912 555 aa19.42■□□□□ 0.7
SYNGR3-204ENST00000564642 RUNX3Q13761 415 aa19.42■□□□□ 0.7
SYNGR3-204ENST00000564642 MTF1Q14872 753 aa19.42■□□□□ 0.7
SYNGR3-204ENST00000564642 RALGPS2Q86X27 583 aaPredicted RBP19.42■□□□□ 0.7
SYNGR3-204ENST00000564642 CREBRFQ8IUR6 639 aa19.42■□□□□ 0.7
SYNGR3-204ENST00000564642 C1orf210Q8IVY1 113 aa19.42■□□□□ 0.7
SYNGR3-204ENST00000564642 MLKLQ8NB16 471 aa19.42■□□□□ 0.7
SYNGR3-204ENST00000564642 CLDN23Q96B33 292 aa19.42■□□□□ 0.7
SYNGR3-204ENST00000564642 GBP4Q96PP9 640 aa19.42■□□□□ 0.7
SYNGR3-204ENST00000564642 ARID3AQ99856 593 aa19.42■□□□□ 0.7
SYNGR3-204ENST00000564642 FAM83CQ9BQN1 747 aa19.42■□□□□ 0.7
SYNGR3-204ENST00000564642 EBF3Q9H4W6 596 aa19.42■□□□□ 0.7
SYNGR3-204ENST00000564642 FAM86C1Q9NVL1 165 aa19.42■□□□□ 0.7
SYNGR3-204ENST00000564642 SPATA6Q9NWH7 488 aaPredicted RBP19.42■□□□□ 0.7
SYNGR3-204ENST00000564642 CHORDC1Q9UHD1 332 aaPredicted RBP19.42■□□□□ 0.7
SYNGR3-204ENST00000564642 RWDD2AQ9UIY3 292 aa19.42■□□□□ 0.7
SYNGR3-204ENST00000564642 ARHGAP26Q9UNA1 814 aa19.42■□□□□ 0.7
SYNGR3-204ENST00000564642 PMM2O15305 246 aa19.41■□□□□ 0.7
SYNGR3-204ENST00000564642 P4HA2O15460 535 aa19.41■□□□□ 0.7
SYNGR3-204ENST00000564642 TBXAS1P24557 533 aaPredicted RBP19.41■□□□□ 0.7
SYNGR3-204ENST00000564642 RPS9P46781 194 aaKnown RBP19.41■□□□□ 0.7
SYNGR3-204ENST00000564642 SOX9P48436 509 aa19.41■□□□□ 0.7
SYNGR3-204ENST00000564642 CUL2Q13617 745 aa19.41■□□□□ 0.7
SYNGR3-204ENST00000564642 PDGFRLQ15198 375 aa19.41■□□□□ 0.7
SYNGR3-204ENST00000564642 ZNF77Q15935 545 aa19.41■□□□□ 0.7
SYNGR3-204ENST00000564642 PPP1R26Q5T8A7 1209 aaPredicted RBP19.41■□□□□ 0.7
SYNGR3-204ENST00000564642 TRIM68Q6AZZ1 485 aa19.41■□□□□ 0.7
SYNGR3-204ENST00000564642 SH3RF2Q8TEC5 729 aa19.41■□□□□ 0.7
SYNGR3-204ENST00000564642 RNF38Q9H0F5 515 aa19.41■□□□□ 0.7
SYNGR3-204ENST00000564642 NUP62CLQ9H1M0 184 aa19.41■□□□□ 0.7
SYNGR3-204ENST00000564642 DUS2Q9NX74 493 aaKnown RBP19.41■□□□□ 0.7
SYNGR3-204ENST00000564642 IL37Q9NZH6 218 aa19.41■□□□□ 0.7
SYNGR3-204ENST00000564642 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.41■□□□□ 0.7
SYNGR3-204ENST00000564642 TCF3P15923 654 aa19.4■□□□□ 0.7
SYNGR3-204ENST00000564642 CTHP32929 405 aa19.4■□□□□ 0.7
SYNGR3-204ENST00000564642 IFNAR2P48551 515 aa19.4■□□□□ 0.7
SYNGR3-204ENST00000564642 RAD23BP54727 409 aa19.4■□□□□ 0.7
SYNGR3-204ENST00000564642 MARSP56192 900 aaKnown RBP19.4■□□□□ 0.7
SYNGR3-204ENST00000564642 KCNH2Q12809 1159 aa19.4■□□□□ 0.7
SYNGR3-204ENST00000564642 HECTD3Q5T447 861 aa19.4■□□□□ 0.7
SYNGR3-204ENST00000564642 CLEC20AQ6ZU45 233 aa19.4■□□□□ 0.7
SYNGR3-204ENST00000564642 TRIM59Q8IWR1 403 aa19.4■□□□□ 0.7
SYNGR3-204ENST00000564642 SLC4A11Q8NBS3 891 aa19.4■□□□□ 0.7
SYNGR3-204ENST00000564642 OSCP1Q8WVF1 389 aa19.4■□□□□ 0.7
SYNGR3-204ENST00000564642 JAKMIP2Q96AA8 810 aa19.4■□□□□ 0.7
SYNGR3-204ENST00000564642 NT5C1BQ96P26 610 aa19.4■□□□□ 0.7
SYNGR3-204ENST00000564642 IPO9Q96P70 1041 aaKnown RBP19.4■□□□□ 0.7
SYNGR3-204ENST00000564642 LMAN1LQ9HAT1 526 aa19.4■□□□□ 0.7
SYNGR3-204ENST00000564642 LMBRD1Q9NUN5 540 aa19.4■□□□□ 0.7
SYNGR3-204ENST00000564642 PATJQ8NI35 1801 aa19.39■□□□□ 0.7
SYNGR3-204ENST00000564642 LAMTOR5O43504 91 aa19.39■□□□□ 0.69
SYNGR3-204ENST00000564642 OAS1P00973 400 aaKnown RBP19.39■□□□□ 0.69
SYNGR3-204ENST00000564642 MBL2P11226 248 aaPredicted RBP19.39■□□□□ 0.69
SYNGR3-204ENST00000564642 SLC7A9P82251 487 aa19.39■□□□□ 0.69
SYNGR3-204ENST00000564642 AMPD2Q01433 879 aa19.39■□□□□ 0.69
SYNGR3-204ENST00000564642 USP4Q13107 963 aa19.39■□□□□ 0.69
SYNGR3-204ENST00000564642 FZD5Q13467 585 aa19.39■□□□□ 0.69
SYNGR3-204ENST00000564642 TPD52L1Q16890 204 aaPredicted RBP19.39■□□□□ 0.69
SYNGR3-204ENST00000564642 SNX30Q5VWJ9 437 aa19.39■□□□□ 0.69
SYNGR3-204ENST00000564642 RIN3Q8TB24 985 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms