RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 FOXN3O00409 490 aaPredicted RBP17.62■□□□□ 0.41
RNF40-206ENST00000564260 ECI2O75521 394 aa17.62■□□□□ 0.41
RNF40-206ENST00000564260 CEBPBP17676 345 aa17.62■□□□□ 0.41
RNF40-206ENST00000564260 SSTR3P32745 418 aaPredicted RBP17.62■□□□□ 0.41
RNF40-206ENST00000564260 KIF11P52732 1056 aa17.62■□□□□ 0.41
RNF40-206ENST00000564260 JAM2P57087 298 aa17.62■□□□□ 0.41
RNF40-206ENST00000564260 SNX16P57768 344 aa17.62■□□□□ 0.41
RNF40-206ENST00000564260 GOLGA7BQ2TAP0 167 aa17.62■□□□□ 0.41
RNF40-206ENST00000564260 RAB41Q5JT25 222 aa17.62■□□□□ 0.41
RNF40-206ENST00000564260 GJB7Q6PEY0 223 aa17.62■□□□□ 0.41
RNF40-206ENST00000564260 CCDC186Q7Z3E2 898 aa17.62■□□□□ 0.41
RNF40-206ENST00000564260 MON1AQ86VX9 555 aa17.62■□□□□ 0.41
RNF40-206ENST00000564260 TTC30AQ86WT1 665 aa17.62■□□□□ 0.41
RNF40-206ENST00000564260 ARHGAP18Q8N392 663 aa17.62■□□□□ 0.41
RNF40-206ENST00000564260 SMARCD2Q92925 531 aa17.62■□□□□ 0.41
RNF40-206ENST00000564260 ASB16Q96NS5 453 aa17.62■□□□□ 0.41
RNF40-206ENST00000564260 CDK5RAP1Q96SZ6 601 aaKnown RBP17.62■□□□□ 0.41
RNF40-206ENST00000564260 LHX5Q9H2C1 402 aa17.62■□□□□ 0.41
RNF40-206ENST00000564260 KIF9Q9HAQ2 790 aa17.62■□□□□ 0.41
RNF40-206ENST00000564260 MAGED2Q9UNF1 606 aaPredicted RBP17.62■□□□□ 0.41
RNF40-206ENST00000564260 VCANP13611 3396 aa17.62■□□□□ 0.41
RNF40-206ENST00000564260 BEST1O76090 585 aa17.61■□□□□ 0.41
RNF40-206ENST00000564260 ZDHHC11BP0C7U3 371 aa17.61■□□□□ 0.41
RNF40-206ENST00000564260 USP8P40818 1118 aa17.61■□□□□ 0.41
RNF40-206ENST00000564260 STAT1P42224 750 aa17.61■□□□□ 0.41
RNF40-206ENST00000564260 ACADSBP45954 432 aa17.61■□□□□ 0.41
RNF40-206ENST00000564260 POLR2FP61218 127 aaKnown RBP17.61■□□□□ 0.41
RNF40-206ENST00000564260 MTMR3Q13615 1198 aa17.61■□□□□ 0.41
RNF40-206ENST00000564260 ZNF268Q14587 947 aaPredicted RBP17.61■□□□□ 0.41
RNF40-206ENST00000564260 TEAD2Q15562 447 aa17.61■□□□□ 0.41
RNF40-206ENST00000564260 SDHAF4Q5VUM1 108 aa17.61■□□□□ 0.41
RNF40-206ENST00000564260 TMEM150AQ86TG1 271 aa17.61■□□□□ 0.41
RNF40-206ENST00000564260 TADA2BQ86TJ2 420 aa17.61■□□□□ 0.41
RNF40-206ENST00000564260 PIGZQ86VD9 579 aa17.61■□□□□ 0.41
RNF40-206ENST00000564260 UBALD2Q8IYN6 164 aa17.61■□□□□ 0.41
RNF40-206ENST00000564260 FEZF2Q8TBJ5 459 aa17.61■□□□□ 0.41
RNF40-206ENST00000564260 GPR152Q8TDT2 470 aa17.61■□□□□ 0.41
RNF40-206ENST00000564260 SLC35F5Q8WV83 523 aa17.61■□□□□ 0.41
RNF40-206ENST00000564260 TFAP2BQ92481 460 aa17.61■□□□□ 0.41
RNF40-206ENST00000564260 FBXO32Q969P5 355 aa17.61■□□□□ 0.41
RNF40-206ENST00000564260 ELSPBP1Q96BH3 223 aa17.61■□□□□ 0.41
RNF40-206ENST00000564260 TCEAL4Q96EI5 215 aa17.61■□□□□ 0.41
RNF40-206ENST00000564260 NOX5Q96PH1 765 aa17.61■□□□□ 0.41
RNF40-206ENST00000564260 NUCKS1Q9H1E3 243 aaKnown RBP17.61■□□□□ 0.41
RNF40-206ENST00000564260 TLR8Q9NR97 1041 aaKnown RBP17.61■□□□□ 0.41
RNF40-206ENST00000564260 CEP83Q9Y592 693 aa17.61■□□□□ 0.41
RNF40-206ENST00000564260 C5orf42Q9H799 3197 aa17.6■□□□□ 0.41
RNF40-206ENST00000564260 ZNF840PA6NDX5 716 aa17.6■□□□□ 0.41
RNF40-206ENST00000564260 M0QYV0 167 aa17.6■□□□□ 0.41
RNF40-206ENST00000564260 CYP26A1O43174 497 aa17.6■□□□□ 0.41
RNF40-206ENST00000564260 SART1O43290 800 aaKnown RBP17.6■□□□□ 0.41
RNF40-206ENST00000564260 FBXO21O94952 628 aa17.6■□□□□ 0.41
RNF40-206ENST00000564260 TCF3P15923 654 aa17.6■□□□□ 0.41
RNF40-206ENST00000564260 CLCN1P35523 988 aa17.6■□□□□ 0.41
RNF40-206ENST00000564260 SOX5P35711 763 aa17.6■□□□□ 0.41
RNF40-206ENST00000564260 RPL34P49207 117 aaKnown RBP17.6■□□□□ 0.41
RNF40-206ENST00000564260 APBA1Q02410 837 aa17.6■□□□□ 0.41
RNF40-206ENST00000564260 PDE4CQ08493 712 aa17.6■□□□□ 0.41
RNF40-206ENST00000564260 TAF10Q12962 218 aa17.6■□□□□ 0.41
RNF40-206ENST00000564260 HTR4Q13639 388 aa17.6■□□□□ 0.41
RNF40-206ENST00000564260 GPR158Q5T848 1215 aa17.6■□□□□ 0.41
RNF40-206ENST00000564260 CACNA2D4Q7Z3S7 1137 aa17.6■□□□□ 0.41
RNF40-206ENST00000564260 DEPDC1BQ8WUY9 529 aa17.6■□□□□ 0.41
RNF40-206ENST00000564260 NAP1L5Q96NT1 182 aaPredicted RBP17.6■□□□□ 0.41
RNF40-206ENST00000564260 TRIM62Q9BVG3 475 aa17.6■□□□□ 0.41
RNF40-206ENST00000564260 SLITRK6Q9H5Y7 841 aa17.6■□□□□ 0.41
RNF40-206ENST00000564260 CNGB3Q9NQW8 809 aa17.6■□□□□ 0.41
RNF40-206ENST00000564260 CLIC5Q9NZA1 410 aa17.6■□□□□ 0.41
RNF40-206ENST00000564260 SORCS3Q9UPU3 1222 aa17.6■□□□□ 0.41
RNF40-206ENST00000564260 ITIH6Q6UXX5 1313 aa17.6■□□□□ 0.41
RNF40-206ENST00000564260 TRAV19A0A0A6YYK7 116 aa17.59■□□□□ 0.41
RNF40-206ENST00000564260 A0A1W2PQJ5 194 aa17.59■□□□□ 0.41
RNF40-206ENST00000564260 TEX33O43247 280 aa17.59■□□□□ 0.41
RNF40-206ENST00000564260 THAP12O43422 761 aa17.59■□□□□ 0.41
RNF40-206ENST00000564260 TADA3O75528 432 aa17.59■□□□□ 0.41
RNF40-206ENST00000564260 LSM8O95777 96 aaKnown RBP17.59■□□□□ 0.41
RNF40-206ENST00000564260 OLFM2O95897 454 aa17.59■□□□□ 0.41
RNF40-206ENST00000564260 ALADP13716 330 aa17.59■□□□□ 0.41
RNF40-206ENST00000564260 CYP11B1P15538 503 aa17.59■□□□□ 0.41
RNF40-206ENST00000564260 BRD2P25440 801 aaKnown RBP17.59■□□□□ 0.41
RNF40-206ENST00000564260 KRT9P35527 623 aa17.59■□□□□ 0.41
RNF40-206ENST00000564260 AVPR1AP37288 418 aa17.59■□□□□ 0.41
RNF40-206ENST00000564260 PBX1P40424 430 aa17.59■□□□□ 0.41
RNF40-206ENST00000564260 GPD2P43304 727 aa17.59■□□□□ 0.41
RNF40-206ENST00000564260 USP46P62068 366 aa17.59■□□□□ 0.41
RNF40-206ENST00000564260 PTPN21Q16825 1174 aa17.59■□□□□ 0.41
RNF40-206ENST00000564260 PM20D1Q6GTS8 502 aa17.59■□□□□ 0.41
RNF40-206ENST00000564260 KLHDC10Q6PID8 442 aa17.59■□□□□ 0.41
RNF40-206ENST00000564260 SARM1Q6SZW1 724 aa17.59■□□□□ 0.41
RNF40-206ENST00000564260 RNF135Q8IUD6 432 aa17.59■□□□□ 0.41
RNF40-206ENST00000564260 CMTM8Q8IZV2 173 aa17.59■□□□□ 0.41
RNF40-206ENST00000564260 ZSCAN18Q8TBC5 510 aaPredicted RBP17.59■□□□□ 0.41
RNF40-206ENST00000564260 IRGQQ8WZA9 623 aa17.59■□□□□ 0.41
RNF40-206ENST00000564260 ZSWIM1Q9BR11 485 aa17.59■□□□□ 0.41
RNF40-206ENST00000564260 MIS12Q9H081 205 aa17.59■□□□□ 0.41
RNF40-206ENST00000564260 KCNK12Q9HB15 430 aa17.59■□□□□ 0.41
RNF40-206ENST00000564260 LRRC4Q9HBW1 653 aa17.59■□□□□ 0.41
RNF40-206ENST00000564260 ZFP14Q9HCL3 533 aa17.59■□□□□ 0.41
RNF40-206ENST00000564260 AJAP1Q9UKB5 411 aaPredicted RBP17.59■□□□□ 0.41
RNF40-206ENST00000564260 USP17L7P0C7H9 530 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms