RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 WASF2Q9Y6W5 498 aa13.09□□□□□ -0.31
COMMD4-209ENST00000564068 FESP07332 822 aa13.09□□□□□ -0.31
COMMD4-209ENST00000564068 PMLP29590 882 aa13.09□□□□□ -0.31
COMMD4-209ENST00000564068 ITGA9Q13797 1035 aa13.09□□□□□ -0.31
COMMD4-209ENST00000564068 DCAF12L1Q5VU92 463 aa13.09□□□□□ -0.31
COMMD4-209ENST00000564068 IL31Q6EBC2 164 aa13.09□□□□□ -0.31
COMMD4-209ENST00000564068 POLNQ7Z5Q5 900 aa13.09□□□□□ -0.31
COMMD4-209ENST00000564068 FAM71AQ8IYT1 594 aa13.09□□□□□ -0.31
COMMD4-209ENST00000564068 OR6Y1Q8NGX8 325 aa13.09□□□□□ -0.31
COMMD4-209ENST00000564068 FAXDC2Q96IV6 333 aa13.09□□□□□ -0.31
COMMD4-209ENST00000564068 STX18Q9P2W9 335 aaKnown RBP13.09□□□□□ -0.31
COMMD4-209ENST00000564068 BAG5Q9UL15 447 aa13.09□□□□□ -0.31
COMMD4-209ENST00000564068 SCAF8Q9UPN6 1271 aaKnown RBP13.09□□□□□ -0.31
COMMD4-209ENST00000564068 TNS2Q63HR2 1409 aa13.09□□□□□ -0.31
COMMD4-209ENST00000564068 ARHGEF37A1IGU5 675 aa13.09□□□□□ -0.31
COMMD4-209ENST00000564068 SMAPO00193 183 aa13.09□□□□□ -0.31
COMMD4-209ENST00000564068 SLC4A1P02730 911 aa13.09□□□□□ -0.31
COMMD4-209ENST00000564068 TFE3P19532 575 aaPredicted RBP13.09□□□□□ -0.31
COMMD4-209ENST00000564068 SERPINB8P50452 374 aa13.09□□□□□ -0.31
COMMD4-209ENST00000564068 KPNA2P52292 529 aaKnown RBP13.09□□□□□ -0.31
COMMD4-209ENST00000564068 PDPK2PQ6A1A2 396 aa13.09□□□□□ -0.31
COMMD4-209ENST00000564068 TTC33Q6PID6 262 aaPredicted RBP13.09□□□□□ -0.31
COMMD4-209ENST00000564068 KDELC2Q7Z4H8 507 aa13.09□□□□□ -0.31
COMMD4-209ENST00000564068 KCTD17Q8N5Z5 321 aa13.09□□□□□ -0.31
COMMD4-209ENST00000564068 RNF149Q8NC42 400 aa13.09□□□□□ -0.31
COMMD4-209ENST00000564068 DDI1Q8WTU0 396 aa13.09□□□□□ -0.31
COMMD4-209ENST00000564068 ZNF606Q8WXB4 792 aa13.09□□□□□ -0.31
COMMD4-209ENST00000564068 BEGAINQ9BUH8 593 aa13.09□□□□□ -0.31
COMMD4-209ENST00000564068 CADM1Q9BY67 442 aaKnown RBP13.09□□□□□ -0.31
COMMD4-209ENST00000564068 RGPD8O14715 1765 aaPredicted RBP13.08□□□□□ -0.31
COMMD4-209ENST00000564068 PEX11AO75192 247 aa13.08□□□□□ -0.32
COMMD4-209ENST00000564068 CYP1A2P05177 515 aa13.08□□□□□ -0.32
COMMD4-209ENST00000564068 LYNP07948 512 aa13.08□□□□□ -0.32
COMMD4-209ENST00000564068 RARRES1P49788 294 aa13.08□□□□□ -0.32
COMMD4-209ENST00000564068 TAS2R40P59535 323 aa13.08□□□□□ -0.32
COMMD4-209ENST00000564068 MRPS22P82650 360 aaKnown RBP13.08□□□□□ -0.32
COMMD4-209ENST00000564068 CYP24A1Q07973 514 aa13.08□□□□□ -0.32
COMMD4-209ENST00000564068 MROH7Q68CQ1 1323 aa13.08□□□□□ -0.32
COMMD4-209ENST00000564068 GALNT15Q8N3T1 639 aa13.08□□□□□ -0.32
COMMD4-209ENST00000564068 MRPL40Q9NQ50 206 aaKnown RBP13.08□□□□□ -0.32
COMMD4-209ENST00000564068 EXTL3O43909 919 aa13.08□□□□□ -0.32
COMMD4-209ENST00000564068 RALBP11234 206 aa13.08□□□□□ -0.32
COMMD4-209ENST00000564068 IL10P22301 178 aa13.08□□□□□ -0.32
COMMD4-209ENST00000564068 USP4Q13107 963 aa13.08□□□□□ -0.32
COMMD4-209ENST00000564068 LPCAT4Q643R3 524 aa13.08□□□□□ -0.32
COMMD4-209ENST00000564068 LPCAT2Q7L5N7 544 aa13.08□□□□□ -0.32
COMMD4-209ENST00000564068 PBXIP1Q96AQ6 731 aa13.08□□□□□ -0.32
COMMD4-209ENST00000564068 VPS39Q96JC1 886 aa13.08□□□□□ -0.32
COMMD4-209ENST00000564068 CSDE1O75534 798 aaKnown RBP13.08□□□□□ -0.32
COMMD4-209ENST00000564068 FAM58BPP0C7Q3 252 aa13.08□□□□□ -0.32
COMMD4-209ENST00000564068 ALADP13716 330 aa13.08□□□□□ -0.32
COMMD4-209ENST00000564068 DPEP1P16444 411 aa13.08□□□□□ -0.32
COMMD4-209ENST00000564068 SHMT1P34896 483 aa13.08□□□□□ -0.32
COMMD4-209ENST00000564068 HIRAP54198 1017 aaPredicted RBP13.08□□□□□ -0.32
COMMD4-209ENST00000564068 FOXD4Q12950 439 aaPredicted RBP13.08□□□□□ -0.32
COMMD4-209ENST00000564068 UBAP2LQ14157 1087 aaKnown RBP13.08□□□□□ -0.32
COMMD4-209ENST00000564068 USP10Q14694 798 aaKnown RBP13.08□□□□□ -0.32
COMMD4-209ENST00000564068 PDK3Q15120 406 aa13.08□□□□□ -0.32
COMMD4-209ENST00000564068 FAM47CQ5HY64 1035 aa13.08□□□□□ -0.32
COMMD4-209ENST00000564068 SLC10A5Q5PT55 438 aa13.08□□□□□ -0.32
COMMD4-209ENST00000564068 CIAPIN1Q6FI81 312 aa13.08□□□□□ -0.32
COMMD4-209ENST00000564068 FOXR2Q6PJQ5 311 aa13.08□□□□□ -0.32
COMMD4-209ENST00000564068 RAB44Q7Z6P3 723 aaPredicted RBP13.08□□□□□ -0.32
COMMD4-209ENST00000564068 ULK2Q8IYT8 1036 aa13.08□□□□□ -0.32
COMMD4-209ENST00000564068 NUP93Q8N1F7 819 aa13.08□□□□□ -0.32
COMMD4-209ENST00000564068 JADE3Q92613 823 aa13.08□□□□□ -0.32
COMMD4-209ENST00000564068 SYT15Q9BQS2 421 aa13.08□□□□□ -0.32
COMMD4-209ENST00000564068 PAIP1Q9H074 479 aaKnown RBP13.08□□□□□ -0.32
COMMD4-209ENST00000564068 SNX25Q9H3E2 840 aa13.08□□□□□ -0.32
COMMD4-209ENST00000564068 DDX4Q9NQI0 724 aaKnown RBP13.08□□□□□ -0.32
COMMD4-209ENST00000564068 ZNF302Q9NR11 478 aa13.08□□□□□ -0.32
COMMD4-209ENST00000564068 V9GYQ6 96 aa13.08□□□□□ -0.32
COMMD4-209ENST00000564068 PLSCR1O15162 318 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 NPTXRO95502 500 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 C6orf222P0C671 652 aaPredicted RBP13.07□□□□□ -0.32
COMMD4-209ENST00000564068 BAATQ14032 418 aaPredicted RBP13.07□□□□□ -0.32
COMMD4-209ENST00000564068 MYBPC2Q14324 1141 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 SGSM1Q2NKQ1 1148 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 ACSBG2Q5FVE4 666 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 N4BP2L1Q5TBK1 243 aaPredicted RBP13.07□□□□□ -0.32
COMMD4-209ENST00000564068 BNC2Q6ZN30 1099 aaPredicted RBP13.07□□□□□ -0.32
COMMD4-209ENST00000564068 NSUN6Q8TEA1 469 aaKnown RBP13.07□□□□□ -0.32
COMMD4-209ENST00000564068 PSPC1Q8WXF1 523 aaKnown RBP13.07□□□□□ -0.32
COMMD4-209ENST00000564068 ATP6V1E2Q96A05 226 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 ZNF669Q96BR6 464 aaPredicted RBP13.07□□□□□ -0.32
COMMD4-209ENST00000564068 MRPL4Q9BYD3 311 aaKnown RBP13.07□□□□□ -0.32
COMMD4-209ENST00000564068 COPS7BQ9H9Q2 264 aaPredicted RBP13.07□□□□□ -0.32
COMMD4-209ENST00000564068 WDR35Q9P2L0 1181 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 SLC39A10Q9ULF5 831 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 STXBP5LQ9Y2K9 1186 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 SYCE1LA8MT33 242 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 ABLIM1O14639 778 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 MEIS2O14770 477 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 THRAP10827 490 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 GLRA2P23416 452 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 RGS2P41220 211 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 PKNOX1P55347 436 aa13.07□□□□□ -0.32
COMMD4-209ENST00000564068 RPL7AP62424 266 aaKnown RBP13.07□□□□□ -0.32
COMMD4-209ENST00000564068 LBRQ14739 615 aaKnown RBP13.07□□□□□ -0.32
COMMD4-209ENST00000564068 SLC5A9Q2M3M2 681 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms