RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 TSTD1Q8NFU3 115 aa10.16□□□□□ -0.78
CLN6-203ENST00000563917 OVCA2Q8WZ82 227 aa10.16□□□□□ -0.78
CLN6-203ENST00000563917 HHIPQ96QV1 700 aa10.16□□□□□ -0.78
CLN6-203ENST00000563917 SLC22A12Q96S37 553 aa10.16□□□□□ -0.78
CLN6-203ENST00000563917 TTLL2Q9BWV7 592 aa10.16□□□□□ -0.78
CLN6-203ENST00000563917 ARRDC1-AS1Q9H2J1 176 aa10.16□□□□□ -0.78
CLN6-203ENST00000563917 DMAP1Q9NPF5 467 aaPredicted RBP10.16□□□□□ -0.78
CLN6-203ENST00000563917 SMPD4Q9NXE4 827 aa10.16□□□□□ -0.78
CLN6-203ENST00000563917 SERTAD1Q9UHV2 236 aa10.16□□□□□ -0.78
CLN6-203ENST00000563917 SH3BP1Q9Y3L3 701 aa10.16□□□□□ -0.78
CLN6-203ENST00000563917 ATP6V1DQ9Y5K8 247 aa10.16□□□□□ -0.78
CLN6-203ENST00000563917 CPQQ9Y646 472 aa10.16□□□□□ -0.78
CLN6-203ENST00000563917 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.15□□□□□ -0.78
CLN6-203ENST00000563917 RPN1P04843 607 aaKnown RBP10.15□□□□□ -0.78
CLN6-203ENST00000563917 TGM1P22735 817 aa10.15□□□□□ -0.78
CLN6-203ENST00000563917 GBP1P32455 592 aa10.15□□□□□ -0.78
CLN6-203ENST00000563917 USP46P62068 366 aa10.15□□□□□ -0.78
CLN6-203ENST00000563917 KRT85P78386 507 aa10.15□□□□□ -0.78
CLN6-203ENST00000563917 DNM1Q05193 864 aaKnown RBP10.15□□□□□ -0.78
CLN6-203ENST00000563917 EHHADHQ08426 723 aa10.15□□□□□ -0.78
CLN6-203ENST00000563917 DMC1Q14565 340 aa10.15□□□□□ -0.78
CLN6-203ENST00000563917 SGSM1Q2NKQ1 1148 aa10.15□□□□□ -0.78
CLN6-203ENST00000563917 USP39Q53GS9 565 aaKnown RBP10.15□□□□□ -0.78
CLN6-203ENST00000563917 WDR44Q5JSH3 913 aa10.15□□□□□ -0.78
CLN6-203ENST00000563917 HECTD3Q5T447 861 aa10.15□□□□□ -0.78
CLN6-203ENST00000563917 BTBD8Q5XKL5 378 aa10.15□□□□□ -0.78
CLN6-203ENST00000563917 CEP135Q66GS9 1140 aa10.15□□□□□ -0.78
CLN6-203ENST00000563917 PKN3Q6P5Z2 889 aa10.15□□□□□ -0.78
CLN6-203ENST00000563917 SCARA5Q6ZMJ2 495 aa10.15□□□□□ -0.78
CLN6-203ENST00000563917 FILIP1Q7Z7B0 1213 aa10.15□□□□□ -0.78
CLN6-203ENST00000563917 TAF4BQ92750 862 aa10.15□□□□□ -0.78
CLN6-203ENST00000563917 SMARCD1Q96GM5 515 aa10.15□□□□□ -0.78
CLN6-203ENST00000563917 SPATA32Q96LK8 384 aa10.15□□□□□ -0.78
CLN6-203ENST00000563917 B3GNT5Q9BYG0 378 aa10.15□□□□□ -0.78
CLN6-203ENST00000563917 ZNF518BQ9C0D4 1074 aa10.15□□□□□ -0.78
CLN6-203ENST00000563917 LINC00597Q9H2U6 94 aa10.15□□□□□ -0.78
CLN6-203ENST00000563917 C2orf42Q9NWW7 574 aa10.15□□□□□ -0.78
CLN6-203ENST00000563917 COMMD8Q9NX08 183 aa10.15□□□□□ -0.78
CLN6-203ENST00000563917 CFAP97Q9P2B7 532 aa10.15□□□□□ -0.78
CLN6-203ENST00000563917 RCOR1Q9UKL0 485 aa10.15□□□□□ -0.78
CLN6-203ENST00000563917 PCDHGA5Q9Y5G8 931 aa10.15□□□□□ -0.78
CLN6-203ENST00000563917 CEP250Q9BV73 2442 aa10.15□□□□□ -0.79
CLN6-203ENST00000563917 OBSL1O75147 1896 aa10.15□□□□□ -0.79
CLN6-203ENST00000563917 RALGAPA1Q6GYQ0 2036 aa10.14□□□□□ -0.79
CLN6-203ENST00000563917 PDXKO00764 312 aa10.14□□□□□ -0.79
CLN6-203ENST00000563917 ZBTB24O43167 697 aaPredicted RBP10.14□□□□□ -0.79
CLN6-203ENST00000563917 AP1G2O75843 785 aa10.14□□□□□ -0.79
CLN6-203ENST00000563917 EPN2O95208 641 aa10.14□□□□□ -0.79
CLN6-203ENST00000563917 NR3C1P04150 777 aa10.14□□□□□ -0.79
CLN6-203ENST00000563917 APODP05090 189 aa10.14□□□□□ -0.79
CLN6-203ENST00000563917 ZNF806P0C7X5 589 aa10.14□□□□□ -0.79
CLN6-203ENST00000563917 KRT13P13646 458 aa10.14□□□□□ -0.79
CLN6-203ENST00000563917 CASP4P49662 377 aa10.14□□□□□ -0.79
CLN6-203ENST00000563917 CDH8P55286 799 aa10.14□□□□□ -0.79
CLN6-203ENST00000563917 SEC13P55735 322 aa10.14□□□□□ -0.79
CLN6-203ENST00000563917 MRPS21P82921 87 aaKnown RBP10.14□□□□□ -0.79
CLN6-203ENST00000563917 GOLGA8FQ08AF8 430 aa10.14□□□□□ -0.79
CLN6-203ENST00000563917 GOLGA8DPQ0D2H9 430 aa10.14□□□□□ -0.79
CLN6-203ENST00000563917 KMT5BQ4FZB7 885 aa10.14□□□□□ -0.79
CLN6-203ENST00000563917 C2orf27AQ580R0 203 aa10.14□□□□□ -0.79
CLN6-203ENST00000563917 KBTBD6Q86V97 674 aa10.14□□□□□ -0.79
CLN6-203ENST00000563917 TTC30AQ86WT1 665 aa10.14□□□□□ -0.79
CLN6-203ENST00000563917 SLC9A9Q8IVB4 645 aa10.14□□□□□ -0.79
CLN6-203ENST00000563917 GRAMD1CQ8IYS0 662 aa10.14□□□□□ -0.79
CLN6-203ENST00000563917 RIN3Q8TB24 985 aa10.14□□□□□ -0.79
CLN6-203ENST00000563917 PARD3BQ8TEW8 1205 aa10.14□□□□□ -0.79
CLN6-203ENST00000563917 ZNF516Q92618 1163 aa10.14□□□□□ -0.79
CLN6-203ENST00000563917 OTUB2Q96DC9 234 aa10.14□□□□□ -0.79
CLN6-203ENST00000563917 PAGE5Q96GU1 130 aa10.14□□□□□ -0.79
CLN6-203ENST00000563917 ZC3H10Q96K80 434 aaKnown RBP10.14□□□□□ -0.79
CLN6-203ENST00000563917 PNKPQ96T60 521 aa10.14□□□□□ -0.79
CLN6-203ENST00000563917 DPEP3Q9H4B8 488 aa10.14□□□□□ -0.79
CLN6-203ENST00000563917 FBXO44Q9H4M3 255 aa10.14□□□□□ -0.79
CLN6-203ENST00000563917 SMYD3Q9H7B4 428 aa10.14□□□□□ -0.79
CLN6-203ENST00000563917 VRTNQ9H8Y1 702 aa10.14□□□□□ -0.79
CLN6-203ENST00000563917 FBRSL1Q9HCM7 1045 aaKnown RBP10.14□□□□□ -0.79
CLN6-203ENST00000563917 VPS45Q9NRW7 570 aa10.14□□□□□ -0.79
CLN6-203ENST00000563917 CIZ1Q9ULV3 898 aaPredicted RBP10.14□□□□□ -0.79
CLN6-203ENST00000563917 DMDP11532 3685 aa10.14□□□□□ -0.79
CLN6-203ENST00000563917 WDR87Q6ZQQ6 2873 aa10.13□□□□□ -0.79
CLN6-203ENST00000563917 A0A1B0GVL5 298 aa10.13□□□□□ -0.79
CLN6-203ENST00000563917 E2F8A0AVK6 867 aa10.13□□□□□ -0.79
CLN6-203ENST00000563917 LRRIQ3A6PVS8 624 aaPredicted RBP10.13□□□□□ -0.79
CLN6-203ENST00000563917 CLDN5O00501 218 aa10.13□□□□□ -0.79
CLN6-203ENST00000563917 IKBKBO14920 756 aa10.13□□□□□ -0.79
CLN6-203ENST00000563917 CYP17A1P05093 508 aa10.13□□□□□ -0.79
CLN6-203ENST00000563917 ADH5P11766 374 aa10.13□□□□□ -0.79
CLN6-203ENST00000563917 CMA1P23946 247 aa10.13□□□□□ -0.79
CLN6-203ENST00000563917 RPL13P26373 211 aaKnown RBP10.13□□□□□ -0.79
CLN6-203ENST00000563917 MPLP40238 635 aa10.13□□□□□ -0.79
CLN6-203ENST00000563917 EIF2DP41214 584 aaKnown RBP10.13□□□□□ -0.79
CLN6-203ENST00000563917 PIK3CAP42336 1068 aa10.13□□□□□ -0.79
CLN6-203ENST00000563917 SYKP43405 635 aa10.13□□□□□ -0.79
CLN6-203ENST00000563917 CREB5Q02930 508 aa10.13□□□□□ -0.79
CLN6-203ENST00000563917 GAD2Q05329 585 aa10.13□□□□□ -0.79
CLN6-203ENST00000563917 STK4Q13043 487 aa10.13□□□□□ -0.79
CLN6-203ENST00000563917 BYSLQ13895 437 aaKnown RBP10.13□□□□□ -0.79
CLN6-203ENST00000563917 DHCR24Q15392 516 aa10.13□□□□□ -0.79
CLN6-203ENST00000563917 HSF5Q4G112 596 aaPredicted RBP10.13□□□□□ -0.79
CLN6-203ENST00000563917 PPM1JQ5JR12 505 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms