RNA–Protein interactions for RNA: ENST00000563888.6

TCF4-221, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-221ENST00000563888 FXNQ16595 210 aa7.98□□□□□ -1.13
TCF4-221ENST00000563888 USP39Q53GS9 565 aaKnown RBP7.98□□□□□ -1.13
TCF4-221ENST00000563888 ARSHQ5FYA8 562 aa7.98□□□□□ -1.13
TCF4-221ENST00000563888 PMS2CLQ68D20 193 aa7.98□□□□□ -1.13
TCF4-221ENST00000563888 SLC6A19Q695T7 634 aa7.98□□□□□ -1.13
TCF4-221ENST00000563888 OVOS1Q6IE37 1185 aa7.98□□□□□ -1.13
TCF4-221ENST00000563888 NLRC3Q7RTR2 1065 aa7.98□□□□□ -1.13
TCF4-221ENST00000563888 NOP9Q86U38 636 aaKnown RBP7.98□□□□□ -1.13
TCF4-221ENST00000563888 RAB11FIP4Q86YS3 637 aa7.98□□□□□ -1.13
TCF4-221ENST00000563888 MCATQ8IVS2 390 aaKnown RBP7.98□□□□□ -1.13
TCF4-221ENST00000563888 SMYD4Q8IYR2 804 aaPredicted RBP7.98□□□□□ -1.13
TCF4-221ENST00000563888 PHACTR4Q8IZ21 702 aa7.98□□□□□ -1.13
TCF4-221ENST00000563888 WFDC12Q8WWY7 111 aa7.98□□□□□ -1.13
TCF4-221ENST00000563888 MRFAP1L1Q96HT8 127 aa7.98□□□□□ -1.13
TCF4-221ENST00000563888 CPB2Q96IY4 423 aa7.98□□□□□ -1.13
TCF4-221ENST00000563888 TMEM87BQ96K49 555 aa7.98□□□□□ -1.13
TCF4-221ENST00000563888 TMEM209Q96SK2 561 aa7.98□□□□□ -1.13
TCF4-221ENST00000563888 LZTS2Q9BRK4 669 aa7.98□□□□□ -1.13
TCF4-221ENST00000563888 TPSD1Q9BZJ3 242 aa7.98□□□□□ -1.13
TCF4-221ENST00000563888 TRIM6Q9C030 488 aaPredicted RBP7.98□□□□□ -1.13
TCF4-221ENST00000563888 IFT122Q9HBG6 1241 aa7.98□□□□□ -1.13
TCF4-221ENST00000563888 CYP4F11Q9HBI6 524 aa7.98□□□□□ -1.13
TCF4-221ENST00000563888 PCOLCE2Q9UKZ9 415 aa7.98□□□□□ -1.13
TCF4-221ENST00000563888 ACTL7BQ9Y614 415 aa7.98□□□□□ -1.13
TCF4-221ENST00000563888 FLNCQ14315 2725 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 ASCC3Q8N3C0 2202 aaKnown RBP7.97□□□□□ -1.13
TCF4-221ENST00000563888 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.97□□□□□ -1.13
TCF4-221ENST00000563888 WDR64B1ANS9 1081 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 CAPN9O14815 690 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 OPHN1O60890 802 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 MOSPD3O75425 235 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 APBB3O95704 486 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 FOSP01100 380 aaPredicted RBP7.97□□□□□ -1.13
TCF4-221ENST00000563888 IGHA1P01876 353 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 FTH1P19P0C7X4 201 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 CALM1P0DP23 149 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 CALM2P0DP24 149 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 CALM3P0DP25 149 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 NME1P15531 152 aaKnown RBP7.97□□□□□ -1.13
TCF4-221ENST00000563888 RXRAP19793 462 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 SDSP20132 328 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 RAB6AP20340 208 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 ITPKBP27987 946 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 SREBF1P36956 1147 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 NAPAP54920 295 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 CFHR1Q03591 330 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 SRSF1Q07955 248 aaKnown RBP eCLIP7.97□□□□□ -1.13
TCF4-221ENST00000563888 SPIRE1Q08AE8 756 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 SART3Q15020 963 aaKnown RBP7.97□□□□□ -1.13
TCF4-221ENST00000563888 JAKMIP3Q5VZ66 844 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 IQCEQ6IPM2 695 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 FSTL4Q6MZW2 842 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 PDXDC1Q6P996 788 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 RTL10Q7L3V2 364 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 NIPA1Q7RTP0 329 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 HAUS6Q7Z4H7 955 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 TTC30AQ86WT1 665 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 C2CD4AQ8NCU7 369 aaPredicted RBP7.97□□□□□ -1.13
TCF4-221ENST00000563888 GSTCDQ8NEC7 633 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 OR2I1PQ8NGU4 316 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 PRPF31Q8WWY3 499 aaKnown RBP7.97□□□□□ -1.13
TCF4-221ENST00000563888 ADAMTS14Q8WXS8 1223 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 E2F7Q96AV8 911 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 ZNF512Q96ME7 567 aaPredicted RBP7.97□□□□□ -1.13
TCF4-221ENST00000563888 LRRC3BQ96PB8 259 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 SRPK1Q96SB4 655 aaKnown RBP7.97□□□□□ -1.13
TCF4-221ENST00000563888 NXF3Q9H4D5 531 aaKnown RBP7.97□□□□□ -1.13
TCF4-221ENST00000563888 TRPV4Q9HBA0 871 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 ST7Q9NRC1 585 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 TMEM74BQ9NUR3 256 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 TJP2Q9UDY2 1190 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 GIT1Q9Y2X7 761 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 COL4A3BPQ9Y5P4 624 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 SPTAN1Q13813 2472 aaKnown RBP7.97□□□□□ -1.13
TCF4-221ENST00000563888 ABCA12Q86UK0 2595 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 SPAG17Q6Q759 2223 aa7.97□□□□□ -1.13
TCF4-221ENST00000563888 UTP20O75691 2785 aaKnown RBP7.96□□□□□ -1.13
TCF4-221ENST00000563888 IGLV3-22A0A075B6J6 115 aa7.96□□□□□ -1.14
TCF4-221ENST00000563888 A0A087WV48 116 aa7.96□□□□□ -1.14
TCF4-221ENST00000563888 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.96□□□□□ -1.14
TCF4-221ENST00000563888 IGKV6-21A0A0C4DH24 114 aa7.96□□□□□ -1.14
TCF4-221ENST00000563888 ARHGEF37A1IGU5 675 aa7.96□□□□□ -1.14
TCF4-221ENST00000563888 TRABD2BA6NFA1 517 aa7.96□□□□□ -1.14
TCF4-221ENST00000563888 UPK3BL1B0FP48 263 aa7.96□□□□□ -1.14
TCF4-221ENST00000563888 UPK3BL2E5RIL1 263 aa7.96□□□□□ -1.14
TCF4-221ENST00000563888 K7ELQ4 463 aaPredicted RBP7.96□□□□□ -1.14
TCF4-221ENST00000563888 SH3BP5O60239 455 aa7.96□□□□□ -1.14
TCF4-221ENST00000563888 MAFO75444 373 aaPredicted RBP7.96□□□□□ -1.14
TCF4-221ENST00000563888 ERLIN2O94905 339 aa7.96□□□□□ -1.14
TCF4-221ENST00000563888 EGFP01133 1207 aa7.96□□□□□ -1.14
TCF4-221ENST00000563888 IGFBP6P24592 240 aaPredicted RBP7.96□□□□□ -1.14
TCF4-221ENST00000563888 U2AF2P26368 475 aaKnown RBP eCLIP7.96□□□□□ -1.14
TCF4-221ENST00000563888 SMARCA1P28370 1054 aa7.96□□□□□ -1.14
TCF4-221ENST00000563888 GNAQP50148 359 aa7.96□□□□□ -1.14
TCF4-221ENST00000563888 ADCY7P51828 1080 aa7.96□□□□□ -1.14
TCF4-221ENST00000563888 NCBP1Q09161 790 aaKnown RBP7.96□□□□□ -1.14
TCF4-221ENST00000563888 FCHO2Q0JRZ9 810 aa7.96□□□□□ -1.14
TCF4-221ENST00000563888 GRIK3Q13003 919 aa7.96□□□□□ -1.14
TCF4-221ENST00000563888 MAPK6Q16659 721 aa7.96□□□□□ -1.14
TCF4-221ENST00000563888 PRR16Q569H4 304 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms