RNA–Protein interactions for RNA: ENST00000563678.1

CLUHP3-207, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

BASIC

Gene CLUHP3, Length 1,303 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-207ENST00000563678 COL28A1Q2UY09 1125 aa12.1□□□□□ -0.47
CLUHP3-207ENST00000563678 UAP1L1Q3KQV9 507 aa12.1□□□□□ -0.47
CLUHP3-207ENST00000563678 EEF1DP3Q658K8 133 aa12.1□□□□□ -0.47
CLUHP3-207ENST00000563678 CD300LGQ6UXG3 332 aa12.1□□□□□ -0.47
CLUHP3-207ENST00000563678 TMC6Q7Z403 805 aa12.1□□□□□ -0.47
CLUHP3-207ENST00000563678 BRSK2Q8IWQ3 736 aa12.1□□□□□ -0.47
CLUHP3-207ENST00000563678 ZSWIM2Q8NEG5 633 aa12.1□□□□□ -0.47
CLUHP3-207ENST00000563678 IQCDQ96DY2 449 aa12.1□□□□□ -0.47
CLUHP3-207ENST00000563678 TMEM209Q96SK2 561 aa12.1□□□□□ -0.47
CLUHP3-207ENST00000563678 CXCL16Q9H2A7 254 aa12.1□□□□□ -0.47
CLUHP3-207ENST00000563678 MAFFQ9ULX9 164 aa12.1□□□□□ -0.47
CLUHP3-207ENST00000563678 USP20Q9Y2K6 914 aa12.1□□□□□ -0.47
CLUHP3-207ENST00000563678 TRIP11Q15643 1979 aa12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 MYO18BQ8IUG5 2567 aa12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 SPTA1P02549 2419 aa12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 FAM221BA6H8Z2 402 aa12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 GOLGA8IPA6NC78 632 aa12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 GOLGA8JA6NMD2 632 aa12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 H0Y626 953 aa12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 PES1O00541 588 aaKnown RBP12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 DPYSL4O14531 572 aa12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 DCLK1O15075 740 aa12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 PMM2O15305 246 aa12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 XPOTO43592 962 aaKnown RBP12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 STX10O60499 249 aa12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 TRIM16O95361 564 aa12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 PAX3P23760 479 aa12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 MATR3P43243 847 aaKnown RBP eCLIP12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 BRCC3P46736 316 aa12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 CLCNKBP51801 687 aa12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 ARPP19P56211 112 aa12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 GSDMDP57764 484 aa12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 CLDN10P78369 228 aa12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 TWF1Q12792 350 aa12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 TBX2Q13207 712 aaPredicted RBP12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 PSMD6Q15008 389 aa12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 UPP1Q16831 310 aa12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 FIGNQ5HY92 759 aa12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 TCERG1LQ5VWI1 586 aa12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 CRELD2Q6UXH1 353 aaPredicted RBP12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 ARID3BQ8IVW6 561 aaPredicted RBP12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 DRC7Q8IY82 874 aa12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 C3orf58Q8NDZ4 430 aa12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 PARD3BQ8TEW8 1205 aa12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 ZFYVE19Q96K21 471 aa12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 HHIPQ96QV1 700 aa12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 FAM213AQ9BRX8 229 aa12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 OBP2AQ9NY56 170 aa12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 CPSF3Q9UKF6 684 aaKnown RBP12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 SIK3Q9Y2K2 1263 aa12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 URB1O60287 2271 aaKnown RBP12.09□□□□□ -0.47
CLUHP3-207ENST00000563678 KALRNO60229 2985 aa12.08□□□□□ -0.48
CLUHP3-207ENST00000563678 PI4KAP42356 2102 aa12.08□□□□□ -0.48
CLUHP3-207ENST00000563678 H7C4K7 107 aa12.08□□□□□ -0.48
CLUHP3-207ENST00000563678 SYN3O14994 580 aa12.08□□□□□ -0.48
CLUHP3-207ENST00000563678 P4HA2O15460 535 aa12.08□□□□□ -0.48
CLUHP3-207ENST00000563678 TRIM49P0CI25 452 aa12.08□□□□□ -0.48
CLUHP3-207ENST00000563678 TRIM49CP0CI26 452 aa12.08□□□□□ -0.48
CLUHP3-207ENST00000563678 GBP1P32455 592 aa12.08□□□□□ -0.48
CLUHP3-207ENST00000563678 RDXP35241 583 aaKnown RBP12.08□□□□□ -0.48
CLUHP3-207ENST00000563678 FMO5P49326 533 aa12.08□□□□□ -0.48
CLUHP3-207ENST00000563678 SIM1P81133 766 aaPredicted RBP12.08□□□□□ -0.48
CLUHP3-207ENST00000563678 MYL7Q01449 175 aa12.08□□□□□ -0.48
CLUHP3-207ENST00000563678 TNK2Q07912 1038 aa12.08□□□□□ -0.48
CLUHP3-207ENST00000563678 GRSF1Q12849 480 aaKnown RBP eCLIP12.08□□□□□ -0.48
CLUHP3-207ENST00000563678 SYCP1Q15431 976 aa12.08□□□□□ -0.48
CLUHP3-207ENST00000563678 SURF1Q15526 300 aa12.08□□□□□ -0.48
CLUHP3-207ENST00000563678 ITPRIPL2Q3MIP1 535 aa12.08□□□□□ -0.48
CLUHP3-207ENST00000563678 TMEM196Q5HYL7 178 aa12.08□□□□□ -0.48
CLUHP3-207ENST00000563678 C1orf220Q5T0J3 134 aa12.08□□□□□ -0.48
CLUHP3-207ENST00000563678 PMS2CLQ68D20 193 aa12.08□□□□□ -0.48
CLUHP3-207ENST00000563678 FSTL4Q6MZW2 842 aa12.08□□□□□ -0.48
CLUHP3-207ENST00000563678 CYP2U1Q7Z449 544 aa12.08□□□□□ -0.48
CLUHP3-207ENST00000563678 C11orf74Q86VG3 221 aa12.08□□□□□ -0.48
CLUHP3-207ENST00000563678 RDH13Q8NBN7 331 aa12.08□□□□□ -0.48
CLUHP3-207ENST00000563678 SPC24Q8NBT2 197 aa12.08□□□□□ -0.48
CLUHP3-207ENST00000563678 PLEKHO2Q8TD55 490 aa12.08□□□□□ -0.48
CLUHP3-207ENST00000563678 ACAP3Q96P50 834 aa12.08□□□□□ -0.48
CLUHP3-207ENST00000563678 LRRC3BQ96PB8 259 aa12.08□□□□□ -0.48
CLUHP3-207ENST00000563678 BBC3Q96PG8 261 aaPredicted RBP12.08□□□□□ -0.48
CLUHP3-207ENST00000563678 PPP1R10Q96QC0 940 aaKnown RBP12.08□□□□□ -0.48
CLUHP3-207ENST00000563678 CGRRF1Q99675 332 aa12.08□□□□□ -0.48
CLUHP3-207ENST00000563678 RBAKQ9NYW8 714 aaPredicted RBP12.08□□□□□ -0.48
CLUHP3-207ENST00000563678 AFF4Q9UHB7 1163 aaKnown RBP12.08□□□□□ -0.48
CLUHP3-207ENST00000563678 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.08□□□□□ -0.482e-7■■□□□ 12.4
CLUHP3-207ENST00000563678 CELSR3Q9NYQ7 3312 aa12.07□□□□□ -0.48
CLUHP3-207ENST00000563678 THADAQ6YHU6 1953 aa12.07□□□□□ -0.48
CLUHP3-207ENST00000563678 SPAARA0A1B0GVQ0 90 aa12.07□□□□□ -0.48
CLUHP3-207ENST00000563678 A0A1W2PRU2 124 aa12.07□□□□□ -0.48
CLUHP3-207ENST00000563678 LRRIQ3A6PVS8 624 aaPredicted RBP12.07□□□□□ -0.48
CLUHP3-207ENST00000563678 PATE3B3GLJ2 98 aa12.07□□□□□ -0.48
CLUHP3-207ENST00000563678 APBB3O95704 486 aa12.07□□□□□ -0.48
CLUHP3-207ENST00000563678 GYPCP04921 128 aa12.07□□□□□ -0.48
CLUHP3-207ENST00000563678 PTMAP06454 111 aaKnown RBP12.07□□□□□ -0.48
CLUHP3-207ENST00000563678 HARSP12081 509 aaKnown RBP12.07□□□□□ -0.48
CLUHP3-207ENST00000563678 GTF2H1P32780 548 aa12.07□□□□□ -0.48
CLUHP3-207ENST00000563678 RPL9P32969 192 aaKnown RBP12.07□□□□□ -0.48
CLUHP3-207ENST00000563678 GRM5P41594 1212 aa12.07□□□□□ -0.48
CLUHP3-207ENST00000563678 ACOT2P49753 483 aa12.07□□□□□ -0.48
CLUHP3-207ENST00000563678 MXI1P50539 228 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms