RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 PCDHGB2Q9Y5G2 931 aa6.67□□□□□ -1.34
CHD9-205ENST00000562785 USP54Q70EL1 1684 aa6.66□□□□□ -1.34
CHD9-205ENST00000562785 F5H423 210 aaPredicted RBP6.66□□□□□ -1.34
CHD9-205ENST00000562785 TCEA3O75764 348 aa6.66□□□□□ -1.34
CHD9-205ENST00000562785 GCLCP48506 637 aaPredicted RBP6.66□□□□□ -1.34
CHD9-205ENST00000562785 HSPA7P48741 367 aa6.66□□□□□ -1.34
CHD9-205ENST00000562785 ANXA11P50995 505 aaKnown RBP6.66□□□□□ -1.34
CHD9-205ENST00000562785 LOXL3P58215 753 aa6.66□□□□□ -1.34
CHD9-205ENST00000562785 FAM189BP81408 668 aa6.66□□□□□ -1.34
CHD9-205ENST00000562785 MC2RQ01718 297 aa6.66□□□□□ -1.34
CHD9-205ENST00000562785 TNFAIP2Q03169 654 aa6.66□□□□□ -1.34
CHD9-205ENST00000562785 MPEG1Q2M385 716 aa6.66□□□□□ -1.34
CHD9-205ENST00000562785 ZDHHC24Q6UX98 284 aa6.66□□□□□ -1.34
CHD9-205ENST00000562785 SLC30A10Q6XR72 485 aa6.66□□□□□ -1.34
CHD9-205ENST00000562785 RNF44Q7L0R7 432 aa6.66□□□□□ -1.34
CHD9-205ENST00000562785 CLNKQ7Z7G1 428 aa6.66□□□□□ -1.34
CHD9-205ENST00000562785 MYLK4Q86YV6 388 aaPredicted RBP6.66□□□□□ -1.34
CHD9-205ENST00000562785 YAF2Q8IY57 180 aa6.66□□□□□ -1.34
CHD9-205ENST00000562785 TMEM132CQ8N3T6 1108 aa6.66□□□□□ -1.34
CHD9-205ENST00000562785 POF1BQ8WVV4 589 aa6.66□□□□□ -1.34
CHD9-205ENST00000562785 RAPGEF4Q8WZA2 1011 aa6.66□□□□□ -1.34
CHD9-205ENST00000562785 C8orf49Q96NF6 230 aa6.66□□□□□ -1.34
CHD9-205ENST00000562785 PPP1R9BQ96SB3 815 aa6.66□□□□□ -1.34
CHD9-205ENST00000562785 KRTAP4-12Q9BQ66 201 aa6.66□□□□□ -1.34
CHD9-205ENST00000562785 KRTAP3-1Q9BYR8 98 aa6.66□□□□□ -1.34
CHD9-205ENST00000562785 ZNF703Q9H7S9 590 aaPredicted RBP6.66□□□□□ -1.34
CHD9-205ENST00000562785 ZNF212Q9UDV6 495 aa6.66□□□□□ -1.34
CHD9-205ENST00000562785 MID2Q9UJV3 735 aa6.66□□□□□ -1.34
CHD9-205ENST00000562785 CDC23Q9UJX2 597 aa6.66□□□□□ -1.34
CHD9-205ENST00000562785 SHOC2Q9UQ13 582 aa6.66□□□□□ -1.34
CHD9-205ENST00000562785 RAD54BQ9Y620 910 aa6.66□□□□□ -1.34
CHD9-205ENST00000562785 CD163L1Q9NR16 1453 aa6.66□□□□□ -1.34
CHD9-205ENST00000562785 PRAMEF33A0A0G2JMD5 474 aa6.65□□□□□ -1.34
CHD9-205ENST00000562785 RNASET2O00584 256 aaKnown RBP6.65□□□□□ -1.34
CHD9-205ENST00000562785 TOR1BO14657 336 aa6.65□□□□□ -1.34
CHD9-205ENST00000562785 AREL1O15033 823 aa6.65□□□□□ -1.34
CHD9-205ENST00000562785 CCP110O43303 1012 aa6.65□□□□□ -1.34
CHD9-205ENST00000562785 PRAMEF10O60809 474 aa6.65□□□□□ -1.34
CHD9-205ENST00000562785 ERN1O75460 977 aaKnown RBP6.65□□□□□ -1.34
CHD9-205ENST00000562785 RASSF9O75901 435 aa6.65□□□□□ -1.34
CHD9-205ENST00000562785 ZFPL1O95159 310 aa6.65□□□□□ -1.34
CHD9-205ENST00000562785 CENPBP07199 599 aaPredicted RBP6.65□□□□□ -1.34
CHD9-205ENST00000562785 EEF1GP26641 437 aaKnown RBP6.65□□□□□ -1.34
CHD9-205ENST00000562785 ACVR2AP27037 513 aa6.65□□□□□ -1.34
CHD9-205ENST00000562785 IL1R2P27930 398 aa6.65□□□□□ -1.34
CHD9-205ENST00000562785 TRAPPC10P48553 1259 aa6.65□□□□□ -1.34
CHD9-205ENST00000562785 ZNF134P52741 427 aa6.65□□□□□ -1.34
CHD9-205ENST00000562785 MAPK10P53779 464 aa6.65□□□□□ -1.34
CHD9-205ENST00000562785 CTSWP56202 376 aa6.65□□□□□ -1.34
CHD9-205ENST00000562785 CXADRP78310 365 aa6.65□□□□□ -1.34
CHD9-205ENST00000562785 TMEM41AQ96HV5 264 aa6.65□□□□□ -1.34
CHD9-205ENST00000562785 CDK5RAP1Q96SZ6 601 aaKnown RBP6.65□□□□□ -1.34
CHD9-205ENST00000562785 CDK19Q9BWU1 502 aa6.65□□□□□ -1.34
CHD9-205ENST00000562785 EIF2AQ9BY44 585 aaKnown RBP6.65□□□□□ -1.34
CHD9-205ENST00000562785 DHX36Q9H2U1 1008 aaKnown RBP6.65□□□□□ -1.34
CHD9-205ENST00000562785 SMOC2Q9H3U7 446 aa6.65□□□□□ -1.34
CHD9-205ENST00000562785 ZNF768Q9H5H4 540 aaKnown RBP6.65□□□□□ -1.34
CHD9-205ENST00000562785 AKIP1Q9NQ31 210 aa6.65□□□□□ -1.34
CHD9-205ENST00000562785 GJB4Q9NTQ9 266 aa6.65□□□□□ -1.34
CHD9-205ENST00000562785 CEP72Q9P209 647 aa6.65□□□□□ -1.34
CHD9-205ENST00000562785 HDAC9Q9UKV0 1011 aa6.65□□□□□ -1.34
CHD9-205ENST00000562785 MTO1Q9Y2Z2 717 aaKnown RBP6.65□□□□□ -1.34
CHD9-205ENST00000562785 INSRP06213 1382 aa6.65□□□□□ -1.35
CHD9-205ENST00000562785 CPSF1Q10570 1443 aaKnown RBP6.65□□□□□ -1.35
CHD9-205ENST00000562785 A0A087WV62 115 aa6.64□□□□□ -1.35
CHD9-205ENST00000562785 LOC102723971A0A1B0GUV8 181 aa6.64□□□□□ -1.35
CHD9-205ENST00000562785 ADAMTS3O15072 1205 aa6.64□□□□□ -1.35
CHD9-205ENST00000562785 NCR1O76036 304 aa6.64□□□□□ -1.35
CHD9-205ENST00000562785 INMTO95050 263 aa6.64□□□□□ -1.35
CHD9-205ENST00000562785 A1BGP04217 495 aa6.64□□□□□ -1.35
CHD9-205ENST00000562785 MYL4P12829 197 aa6.64□□□□□ -1.35
CHD9-205ENST00000562785 TECP42680 631 aa6.64□□□□□ -1.35
CHD9-205ENST00000562785 LILRA4P59901 499 aa6.64□□□□□ -1.35
CHD9-205ENST00000562785 DYRK1AQ13627 763 aa6.64□□□□□ -1.35
CHD9-205ENST00000562785 BEAN1Q3B7T3 259 aa6.64□□□□□ -1.35
CHD9-205ENST00000562785 PLA1AQ53H76 456 aa6.64□□□□□ -1.35
CHD9-205ENST00000562785 FBLN7Q53RD9 439 aa6.64□□□□□ -1.35
CHD9-205ENST00000562785 TXLNBQ8N3L3 684 aa6.64□□□□□ -1.35
CHD9-205ENST00000562785 VGLL2Q8N8G2 317 aa6.64□□□□□ -1.35
CHD9-205ENST00000562785 IL17DQ8TAD2 202 aa6.64□□□□□ -1.35
CHD9-205ENST00000562785 DVL3Q92997 716 aaPredicted RBP6.64□□□□□ -1.35
CHD9-205ENST00000562785 BOD1Q96IK1 185 aa6.64□□□□□ -1.35
CHD9-205ENST00000562785 TTLL2Q9BWV7 592 aa6.64□□□□□ -1.35
CHD9-205ENST00000562785 C1QTNF3Q9BXJ4 246 aa6.64□□□□□ -1.35
CHD9-205ENST00000562785 STK33Q9BYT3 514 aa6.64□□□□□ -1.35
CHD9-205ENST00000562785 TMEM74BQ9NUR3 256 aa6.64□□□□□ -1.35
CHD9-205ENST00000562785 ZSCAN32Q9NX65 697 aa6.64□□□□□ -1.35
CHD9-205ENST00000562785 CAPN11Q9UMQ6 739 aa6.64□□□□□ -1.35
CHD9-205ENST00000562785 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.64□□□□□ -1.35
CHD9-205ENST00000562785 SPATA31A3Q5VYP0 1347 aa6.64□□□□□ -1.35
CHD9-205ENST00000562785 MYADML2A6NDP7 307 aa6.63□□□□□ -1.35
CHD9-205ENST00000562785 POLR3AO14802 1390 aaPredicted RBP6.63□□□□□ -1.35
CHD9-205ENST00000562785 PLA2G6O60733 806 aa6.63□□□□□ -1.35
CHD9-205ENST00000562785 FAM20BO75063 409 aa6.63□□□□□ -1.35
CHD9-205ENST00000562785 HLA-DOAP06340 250 aa6.63□□□□□ -1.35
CHD9-205ENST00000562785 BTF3P20290 206 aaKnown RBP6.63□□□□□ -1.35
CHD9-205ENST00000562785 ITGALP20701 1170 aa6.63□□□□□ -1.35
CHD9-205ENST00000562785 LRPAP1P30533 357 aa6.63□□□□□ -1.35
CHD9-205ENST00000562785 USP6P35125 1406 aa6.63□□□□□ -1.35
CHD9-205ENST00000562785 PXNP49023 591 aaPredicted RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms