RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 NPSP0C0P6 89 aa2.88□□□□□ -1.95
CHD9-204ENST00000561869 MYF5P13349 255 aa2.88□□□□□ -1.95
CHD9-204ENST00000561869 IL1R1P14778 569 aa2.88□□□□□ -1.95
CHD9-204ENST00000561869 BRAFP15056 766 aa2.88□□□□□ -1.95
CHD9-204ENST00000561869 SFPQP23246 707 aaKnown RBP eCLIP2.88□□□□□ -1.95
CHD9-204ENST00000561869 FPR3P25089 353 aa2.88□□□□□ -1.95
CHD9-204ENST00000561869 PRKAG1P54619 331 aa2.88□□□□□ -1.95
CHD9-204ENST00000561869 PSG6Q00889 435 aa2.88□□□□□ -1.95
CHD9-204ENST00000561869 E2F1Q01094 437 aa2.88□□□□□ -1.95
CHD9-204ENST00000561869 SATB1Q01826 763 aa2.88□□□□□ -1.95
CHD9-204ENST00000561869 GRM1Q13255 1194 aa2.88□□□□□ -1.95
CHD9-204ENST00000561869 CCNIQ14094 377 aa2.88□□□□□ -1.95
CHD9-204ENST00000561869 RNASE12Q5GAN4 147 aaKnown RBP2.88□□□□□ -1.95
CHD9-204ENST00000561869 CERCAMQ5T4B2 595 aa2.88□□□□□ -1.95
CHD9-204ENST00000561869 FCRL6Q6DN72 434 aa2.88□□□□□ -1.95
CHD9-204ENST00000561869 KIRREL2Q6UWL6 708 aa2.88□□□□□ -1.95
CHD9-204ENST00000561869 TRIM72Q6ZMU5 477 aa2.88□□□□□ -1.95
CHD9-204ENST00000561869 SRGAP1Q7Z6B7 1085 aa2.88□□□□□ -1.95
CHD9-204ENST00000561869 C14orf80Q86SX3 495 aa2.88□□□□□ -1.95
CHD9-204ENST00000561869 MYO1HQ8N1T3 1032 aa2.88□□□□□ -1.95
CHD9-204ENST00000561869 VGLL2Q8N8G2 317 aa2.88□□□□□ -1.95
CHD9-204ENST00000561869 TERB1Q8NA31 727 aa2.88□□□□□ -1.95
CHD9-204ENST00000561869 ABHD11Q8NFV4 315 aa2.88□□□□□ -1.95
CHD9-204ENST00000561869 TTC8Q8TAM2 541 aa2.88□□□□□ -1.95
CHD9-204ENST00000561869 DNAJB14Q8TBM8 379 aa2.88□□□□□ -1.95
CHD9-204ENST00000561869 LRTOMTQ8WZ04 291 aa2.88□□□□□ -1.95
CHD9-204ENST00000561869 SPSB4Q96A44 273 aa2.88□□□□□ -1.95
CHD9-204ENST00000561869 APIPQ96GX9 242 aa2.88□□□□□ -1.95
CHD9-204ENST00000561869 RITA1Q96K30 269 aa2.88□□□□□ -1.95
CHD9-204ENST00000561869 FAM204AQ9H8W3 233 aa2.88□□□□□ -1.95
CHD9-204ENST00000561869 SACM1LQ9NTJ5 587 aa2.88□□□□□ -1.95
CHD9-204ENST00000561869 TRMT13Q9NUP7 481 aaKnown RBP2.88□□□□□ -1.95
CHD9-204ENST00000561869 ASIC5Q9NY37 505 aa2.88□□□□□ -1.95
CHD9-204ENST00000561869 KLHL42Q9P2K6 505 aa2.88□□□□□ -1.95
CHD9-204ENST00000561869 ZNF70Q9UC06 446 aaPredicted RBP2.88□□□□□ -1.95
CHD9-204ENST00000561869 AFF4Q9UHB7 1163 aaKnown RBP2.88□□□□□ -1.95
CHD9-204ENST00000561869 PAXBP1Q9Y5B6 917 aa2.88□□□□□ -1.95
CHD9-204ENST00000561869 LOC102723971A0A1B0GUV8 181 aa2.87□□□□□ -1.95
CHD9-204ENST00000561869 WDR91A4D1P6 747 aa2.87□□□□□ -1.95
CHD9-204ENST00000561869 H7C4K7 107 aa2.87□□□□□ -1.95
CHD9-204ENST00000561869 AGPSO00116 658 aa2.87□□□□□ -1.95
CHD9-204ENST00000561869 AP4M1O00189 453 aa2.87□□□□□ -1.95
CHD9-204ENST00000561869 CD3EAPO15446 510 aaKnown RBP2.87□□□□□ -1.95
CHD9-204ENST00000561869 CCP110O43303 1012 aa2.87□□□□□ -1.95
CHD9-204ENST00000561869 RRP9O43818 475 aaKnown RBP2.87□□□□□ -1.95
CHD9-204ENST00000561869 PMPCBO75439 489 aa2.87□□□□□ -1.95
CHD9-204ENST00000561869 FGAP02671 866 aa2.87□□□□□ -1.95
CHD9-204ENST00000561869 DLDP09622 509 aaKnown RBP2.87□□□□□ -1.95
CHD9-204ENST00000561869 PRR35P0CG20 571 aa2.87□□□□□ -1.95
CHD9-204ENST00000561869 TXNP10599 105 aaKnown RBP2.87□□□□□ -1.95
CHD9-204ENST00000561869 KLRC1P26715 233 aa2.87□□□□□ -1.95
CHD9-204ENST00000561869 MPGP29372 298 aa2.87□□□□□ -1.95
CHD9-204ENST00000561869 UQCRC1P31930 480 aa2.87□□□□□ -1.95
CHD9-204ENST00000561869 GKP32189 559 aa2.87□□□□□ -1.95
CHD9-204ENST00000561869 TIRAPP58753 221 aa2.87□□□□□ -1.95
CHD9-204ENST00000561869 RPS16P62249 146 aaKnown RBP2.87□□□□□ -1.95
CHD9-204ENST00000561869 TIAL1Q01085 375 aaKnown RBP eCLIP2.87□□□□□ -1.95
CHD9-204ENST00000561869 POLD3Q15054 466 aaPredicted RBP2.87□□□□□ -1.95
CHD9-204ENST00000561869 SRSF7Q16629 238 aaKnown RBP eCLIP2.87□□□□□ -1.95
CHD9-204ENST00000561869 INSCQ1MX18 579 aa2.87□□□□□ -1.95
CHD9-204ENST00000561869 ZNF750Q32MQ0 723 aa2.87□□□□□ -1.95
CHD9-204ENST00000561869 CEP78Q5JTW2 689 aa2.87□□□□□ -1.95
CHD9-204ENST00000561869 L1TD1Q5T7N2 865 aaKnown RBP2.87□□□□□ -1.95
CHD9-204ENST00000561869 ZNF626Q68DY1 528 aa2.87□□□□□ -1.95
CHD9-204ENST00000561869 ZNF425Q6IV72 752 aa2.87□□□□□ -1.95
CHD9-204ENST00000561869 DARS2Q6PI48 645 aaKnown RBP2.87□□□□□ -1.95
CHD9-204ENST00000561869 CATSPERGQ6ZRH7 1159 aa2.87□□□□□ -1.95
CHD9-204ENST00000561869 BCDIN3DQ7Z5W3 292 aaKnown RBP2.87□□□□□ -1.95
CHD9-204ENST00000561869 NEK8Q86SG6 692 aa2.87□□□□□ -1.95
CHD9-204ENST00000561869 C8orf58Q8NAV2 365 aa2.87□□□□□ -1.95
CHD9-204ENST00000561869 DAZAP1Q96EP5 407 aaKnown RBP2.87□□□□□ -1.95
CHD9-204ENST00000561869 MSLNLQ96KJ4 702 aa2.87□□□□□ -1.95
CHD9-204ENST00000561869 SNX18Q96RF0 628 aa2.87□□□□□ -1.95
CHD9-204ENST00000561869 SH2D3AQ9BRG2 576 aa2.87□□□□□ -1.95
CHD9-204ENST00000561869 QTRT1Q9BXR0 403 aaKnown RBP2.87□□□□□ -1.95
CHD9-204ENST00000561869 SEMA4CQ9C0C4 833 aa2.87□□□□□ -1.95
CHD9-204ENST00000561869 CHST8Q9H2A9 424 aa2.87□□□□□ -1.95
CHD9-204ENST00000561869 DHX36Q9H2U1 1008 aaKnown RBP2.87□□□□□ -1.95
CHD9-204ENST00000561869 ZSCAN32Q9NX65 697 aa2.87□□□□□ -1.95
CHD9-204ENST00000561869 OBP2AQ9NY56 170 aa2.87□□□□□ -1.95
CHD9-204ENST00000561869 RNF7Q9UBF6 113 aa2.87□□□□□ -1.95
CHD9-204ENST00000561869 DKK4Q9UBT3 224 aa2.87□□□□□ -1.95
CHD9-204ENST00000561869 TCEAL9Q9UHQ7 104 aa2.87□□□□□ -1.95
CHD9-204ENST00000561869 CCNL1Q9UK58 526 aaPredicted RBP2.87□□□□□ -1.95
CHD9-204ENST00000561869 DRG1Q9Y295 367 aaKnown RBP2.87□□□□□ -1.95
CHD9-204ENST00000561869 BTBD3Q9Y2F9 522 aa2.87□□□□□ -1.95
CHD9-204ENST00000561869 ZNF804BA4D1E1 1349 aa2.87□□□□□ -1.95
CHD9-204ENST00000561869 GOLIM4O00461 696 aa2.86□□□□□ -1.95
CHD9-204ENST00000561869 PPP6CO00743 305 aa2.86□□□□□ -1.95
CHD9-204ENST00000561869 TP73O15350 636 aa2.86□□□□□ -1.95
CHD9-204ENST00000561869 SPRY2O43597 315 aa2.86□□□□□ -1.95
CHD9-204ENST00000561869 MARCH6O60337 910 aa2.86□□□□□ -1.95
CHD9-204ENST00000561869 SRGAP2O75044 1071 aa2.86□□□□□ -1.95
CHD9-204ENST00000561869 TUBB4AP04350 444 aa2.86□□□□□ -1.95
CHD9-204ENST00000561869 HMGB1P09429 215 aaKnown RBP2.86□□□□□ -1.95
CHD9-204ENST00000561869 CYP2D6P10635 497 aa2.86□□□□□ -1.95
CHD9-204ENST00000561869 MYCLP12524 364 aaPredicted RBP2.86□□□□□ -1.95
CHD9-204ENST00000561869 RHCEP18577 417 aa2.86□□□□□ -1.95
CHD9-204ENST00000561869 BTF3P20290 206 aaKnown RBP2.86□□□□□ -1.95
CHD9-204ENST00000561869 KELP23276 732 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms