RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 HERPUD2Q9BSE4 406 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 SELENOOQ9BVL4 669 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 NT5C1AQ9BXI3 368 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 DPEP3Q9H4B8 488 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 PARVAQ9NVD7 372 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 ANAPC7Q9UJX3 599 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 SNX9Q9Y5X1 595 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 SCINQ9Y6U3 715 aa6.9□□□□□ -1.3
CAPN3-210ENST00000561817 TCRBV7S2A1N4TA0A589 114 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 ARL5CA6NH57 179 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 SIGLEC16A6NMB1 481 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 C9IYK1 514 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 MYO1FO00160 1098 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 TULP2O00295 520 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 FSCN2O14926 492 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 XPOTO43592 962 aaKnown RBP6.89□□□□□ -1.31
CAPN3-210ENST00000561817 SASH3O75995 380 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 SEC31AO94979 1220 aaKnown RBP6.89□□□□□ -1.31
CAPN3-210ENST00000561817 FGGP02679 453 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 GLI1P08151 1106 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 MYBL2P10244 700 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 TCF4P15884 667 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 LORP23490 312 aaPredicted RBP6.89□□□□□ -1.31
CAPN3-210ENST00000561817 LMO2P25791 158 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 MLH1P40692 756 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 RAB27AP51159 221 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 RNASE9P60153 205 aaKnown RBP6.89□□□□□ -1.31
CAPN3-210ENST00000561817 MRPS25P82663 173 aaKnown RBP6.89□□□□□ -1.31
CAPN3-210ENST00000561817 PAK2Q13177 524 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 PDCLQ13371 301 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 ZNF211Q13398 564 aaPredicted RBP6.89□□□□□ -1.31
CAPN3-210ENST00000561817 ZNF268Q14587 947 aaPredicted RBP6.89□□□□□ -1.31
CAPN3-210ENST00000561817 STILQ15468 1287 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 CYP1B1Q16678 543 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 SV2CQ496J9 727 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 SGO2Q562F6 1265 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 PPP1R26Q5T8A7 1209 aaPredicted RBP6.89□□□□□ -1.31
CAPN3-210ENST00000561817 RNF187Q5TA31 235 aaPredicted RBP6.89□□□□□ -1.31
CAPN3-210ENST00000561817 CYP4A22Q5TCH4 519 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 KIAA0319Q5VV43 1072 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 DAB2IPQ5VWQ8 1189 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 TRNP1Q6NT89 227 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 CCNI2Q6ZMN8 369 aaPredicted RBP6.89□□□□□ -1.31
CAPN3-210ENST00000561817 PAQR9Q6ZVX9 377 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 ANKS1BQ7Z6G8 1248 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 TMEM110Q86TL2 294 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 ACOT1Q86TX2 421 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 ERICH1Q86X53 443 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 ECHDC2Q86YB7 292 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 TOP6BLQ8N6T0 577 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 PRELID2Q8N945 189 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 C3orf58Q8NDZ4 430 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 JOSD2Q8TAC2 188 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 UBA3Q8TBC4 463 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 FNIP1Q8TF40 1166 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 SLC35F5Q8WV83 523 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 SEC14L1Q92503 715 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 HEXIM2Q96MH2 286 aaKnown RBP6.89□□□□□ -1.31
CAPN3-210ENST00000561817 ZNF560Q96MR9 790 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 GLT1D1Q96MS3 346 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 ADAM2Q99965 735 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 FUT8Q9BYC5 575 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 PDCL3Q9H2J4 239 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 MRPL47Q9HD33 250 aaKnown RBP6.89□□□□□ -1.31
CAPN3-210ENST00000561817 GDF3Q9NR23 364 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 RGS18Q9NS28 235 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 CACNG4Q9UBN1 327 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 TSPAN16Q9UKR8 245 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 OGDHLQ9ULD0 1010 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 TSC2P49815 1807 aa6.89□□□□□ -1.31
CAPN3-210ENST00000561817 BRCA2P51587 3418 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 TANC1Q9C0D5 1861 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 F8VP50 259 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 CCDC188H7C350 402 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 M0QYV0 167 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 DNM1LO00429 736 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 MAP2K7O14733 419 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 SART1O43290 800 aaKnown RBP6.88□□□□□ -1.31
CAPN3-210ENST00000561817 RAD51CO43502 376 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 ATP8B1O43520 1251 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 PSTPIP1O43586 416 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 SPOPO43791 374 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 B4GALT3O60512 393 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 THP07101 528 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 SETSIPP0DME0 302 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 HSD3B2P26439 372 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 TKTP29401 623 aaKnown RBP6.88□□□□□ -1.31
CAPN3-210ENST00000561817 ECHS1P30084 290 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 RPL9P32969 192 aaKnown RBP6.88□□□□□ -1.31
CAPN3-210ENST00000561817 RFC1P35251 1148 aaPredicted RBP6.88□□□□□ -1.31
CAPN3-210ENST00000561817 GNL1P36915 607 aaPredicted RBP6.88□□□□□ -1.31
CAPN3-210ENST00000561817 PTGIRP43119 386 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 GJA8P48165 433 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 SCNN1GP51170 649 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 RWDD2BP57060 319 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 PSMC1P62191 440 aaKnown RBP6.88□□□□□ -1.31
CAPN3-210ENST00000561817 SLC7A5Q01650 507 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 TAP1Q03518 808 aa6.88□□□□□ -1.31
CAPN3-210ENST00000561817 KLF1Q13351 362 aaPredicted RBP6.88□□□□□ -1.31
CAPN3-210ENST00000561817 MRPL58Q14197 206 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms