RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 CYTH4Q9UIA0 394 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 FARP1Q9Y4F1 1045 aaPredicted RBP11.47□□□□□ -0.57
NEIL1-202ENST00000561643 LCTP09848 1927 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 FZD9O00144 591 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 NPTXRO95502 500 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 CD48P09326 243 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 CXCL8P10145 99 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 SP100P23497 879 aaPredicted RBP11.47□□□□□ -0.57
NEIL1-202ENST00000561643 CCNG1P51959 295 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 GPX6P59796 221 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 EFTUD2Q15029 972 aaKnown RBP eCLIP11.47□□□□□ -0.57
NEIL1-202ENST00000561643 SLC1A5Q15758 541 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 PDK4Q16654 411 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 HSDL1Q3SXM5 330 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 LRRC23Q53EV4 343 aaPredicted RBP11.47□□□□□ -0.57
NEIL1-202ENST00000561643 EEF1DP3Q658K8 133 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 ARFGAP1Q8N6T3 406 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 PHC3Q8NDX5 983 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 TRAPPC12Q8WVT3 735 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 ERP27Q96DN0 273 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 CPXM1Q96SM3 734 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 CALN1Q9BXU9 219 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 RPF1Q9H9Y2 349 aaKnown RBP11.47□□□□□ -0.57
NEIL1-202ENST00000561643 ETNK1Q9HBU6 452 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 EFR3BQ9Y2G0 817 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 ASB3Q9Y575 518 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 CLUHO75153 1309 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 ACKR2O00590 384 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 MAGEB2O15479 319 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 GAS2O43903 313 aaKnown RBP11.47□□□□□ -0.57
NEIL1-202ENST00000561643 PAX3P23760 479 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 RPL22P35268 128 aaKnown RBP11.47□□□□□ -0.57
NEIL1-202ENST00000561643 SLC18A1P54219 525 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 BASP1P80723 227 aaKnown RBP11.47□□□□□ -0.57
NEIL1-202ENST00000561643 CCDC142Q17RM4 750 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 BBS9Q3SYG4 887 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 SH3D19Q5HYK7 790 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 EFHC2Q5JST6 749 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 NOL9Q5SY16 702 aaKnown RBP11.47□□□□□ -0.57
NEIL1-202ENST00000561643 FNBP1LQ5T0N5 605 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 LVRNQ6Q4G3 990 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 C3orf62Q6ZUJ4 267 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 DPH6Q7L8W6 267 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 PALM2Q8IXS6 379 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 KIAA0319LQ8IZA0 1049 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 UCMAQ8WVF2 138 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 MAK16Q9BXY0 300 aaKnown RBP11.47□□□□□ -0.57
NEIL1-202ENST00000561643 SPATC1LQ9H0A9 340 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 LHX5Q9H2C1 402 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 TXLNGQ9NUQ3 528 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 GRID1Q9ULK0 1009 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 PPME1Q9Y570 386 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 USH1CQ9Y6N9 552 aa11.47□□□□□ -0.57
NEIL1-202ENST00000561643 B4GALT4O60513 344 aa11.46□□□□□ -0.57
NEIL1-202ENST00000561643 ARIH2O95376 493 aa11.46□□□□□ -0.57
NEIL1-202ENST00000561643 CCDC15Q0P6D6 951 aa11.46□□□□□ -0.57
NEIL1-202ENST00000561643 MSS51Q4VC12 460 aa11.46□□□□□ -0.57
NEIL1-202ENST00000561643 GADL1Q6ZQY3 521 aa11.46□□□□□ -0.57
NEIL1-202ENST00000561643 TSHZ1Q6ZSZ6 1077 aa11.46□□□□□ -0.57
NEIL1-202ENST00000561643 FAM71DQ8N9W8 422 aa11.46□□□□□ -0.57
NEIL1-202ENST00000561643 FBXO36Q8NEA4 188 aa11.46□□□□□ -0.57
NEIL1-202ENST00000561643 FNIP1Q8TF40 1166 aa11.46□□□□□ -0.57
NEIL1-202ENST00000561643 LRRC37BQ96QE4 947 aa11.46□□□□□ -0.57
NEIL1-202ENST00000561643 FRMD8P1Q9BZ68 369 aaPredicted RBP11.46□□□□□ -0.57
NEIL1-202ENST00000561643 PPP1R12CQ9BZL4 782 aa11.46□□□□□ -0.57
NEIL1-202ENST00000561643 UBE2OQ9C0C9 1292 aaKnown RBP11.46□□□□□ -0.57
NEIL1-202ENST00000561643 MYLK2Q9H1R3 596 aa11.46□□□□□ -0.57
NEIL1-202ENST00000561643 RABGEF1Q9UJ41 708 aa11.46□□□□□ -0.57
NEIL1-202ENST00000561643 LRRC42Q9Y546 428 aa11.46□□□□□ -0.57
NEIL1-202ENST00000561643 SNCAIPQ9Y6H5 919 aa11.46□□□□□ -0.57
NEIL1-202ENST00000561643 MCF2LO15068 1137 aa11.46□□□□□ -0.58
NEIL1-202ENST00000561643 UNC5CO95185 931 aa11.46□□□□□ -0.58
NEIL1-202ENST00000561643 ERBB2P04626 1255 aa11.46□□□□□ -0.58
NEIL1-202ENST00000561643 GNAZP19086 355 aa11.46□□□□□ -0.58
NEIL1-202ENST00000561643 EIF3EP60228 445 aaKnown RBP11.46□□□□□ -0.58
NEIL1-202ENST00000561643 KLC1Q07866 573 aa11.46□□□□□ -0.58
NEIL1-202ENST00000561643 XYLT1Q86Y38 959 aa11.46□□□□□ -0.58
NEIL1-202ENST00000561643 UNC45BQ8IWX7 931 aa11.46□□□□□ -0.58
NEIL1-202ENST00000561643 TMEM192Q8IY95 271 aa11.46□□□□□ -0.58
NEIL1-202ENST00000561643 EXOC8Q8IYI6 725 aa11.46□□□□□ -0.58
NEIL1-202ENST00000561643 PDIK1LQ8N165 341 aa11.46□□□□□ -0.58
NEIL1-202ENST00000561643 NAT8LQ8N9F0 302 aa11.46□□□□□ -0.58
NEIL1-202ENST00000561643 ANKLE1Q8NAG6 615 aa11.46□□□□□ -0.58
NEIL1-202ENST00000561643 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.46□□□□□ -0.58
NEIL1-202ENST00000561643 ZFAND2BQ8WV99 257 aa11.46□□□□□ -0.58
NEIL1-202ENST00000561643 UTP4Q969X6 686 aaKnown RBP11.46□□□□□ -0.58
NEIL1-202ENST00000561643 PAFAH2Q99487 392 aa11.46□□□□□ -0.58
NEIL1-202ENST00000561643 GPR20Q99678 358 aa11.46□□□□□ -0.58
NEIL1-202ENST00000561643 PHACTR1Q9C0D0 580 aa11.46□□□□□ -0.58
NEIL1-202ENST00000561643 BLOC1S6Q9UL45 172 aa11.46□□□□□ -0.58
NEIL1-202ENST00000561643 TYROBPO43914 113 aa11.45□□□□□ -0.58
NEIL1-202ENST00000561643 EDF1O60869 148 aaKnown RBP11.45□□□□□ -0.58
NEIL1-202ENST00000561643 NFICP08651 508 aa11.45□□□□□ -0.58
NEIL1-202ENST00000561643 ATP6V1C1P21283 382 aa11.45□□□□□ -0.58
NEIL1-202ENST00000561643 SKIV2L2P42285 1042 aaKnown RBP11.45□□□□□ -0.58
NEIL1-202ENST00000561643 CLCN3P51790 818 aa11.45□□□□□ -0.58
NEIL1-202ENST00000561643 VGLL4Q14135 290 aa11.45□□□□□ -0.58
NEIL1-202ENST00000561643 TAF5Q15542 800 aa11.45□□□□□ -0.58
NEIL1-202ENST00000561643 KLHL38Q2WGJ6 581 aa11.45□□□□□ -0.58
NEIL1-202ENST00000561643 RGS9BPQ6ZS82 235 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 215.1 ms