RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 WDR59Q6PJI9 974 aa12.31□□□□□ -0.44
HERC1-214ENST00000561400 RNF19BQ6ZMZ0 732 aa12.31□□□□□ -0.44
HERC1-214ENST00000561400 PAQR9Q6ZVX9 377 aa12.31□□□□□ -0.44
HERC1-214ENST00000561400 OR8K1Q8NGG5 319 aa12.31□□□□□ -0.44
HERC1-214ENST00000561400 MYCBPAPQ8TBZ2 947 aa12.31□□□□□ -0.44
HERC1-214ENST00000561400 EPS8L1Q8TE68 723 aa12.31□□□□□ -0.44
HERC1-214ENST00000561400 ZNF606Q8WXB4 792 aa12.31□□□□□ -0.44
HERC1-214ENST00000561400 PGLYRP2Q96PD5 576 aa12.31□□□□□ -0.44
HERC1-214ENST00000561400 KLHL5Q96PQ7 755 aa12.31□□□□□ -0.44
HERC1-214ENST00000561400 OXCT2Q9BYC2 517 aaPredicted RBP12.31□□□□□ -0.44
HERC1-214ENST00000561400 LMAN2LQ9H0V9 348 aa12.31□□□□□ -0.44
HERC1-214ENST00000561400 HOMER3Q9NSC5 361 aa12.31□□□□□ -0.44
HERC1-214ENST00000561400 ABHD10Q9NUJ1 306 aa12.31□□□□□ -0.44
HERC1-214ENST00000561400 CLDN5O00501 218 aa12.3□□□□□ -0.44
HERC1-214ENST00000561400 CFHP08603 1231 aa12.3□□□□□ -0.44
HERC1-214ENST00000561400 CYP11B1P15538 503 aa12.3□□□□□ -0.44
HERC1-214ENST00000561400 HNRNPH3P31942 346 aaKnown RBP12.3□□□□□ -0.44
HERC1-214ENST00000561400 SSTR3P32745 418 aaPredicted RBP12.3□□□□□ -0.44
HERC1-214ENST00000561400 NDUFV1P49821 464 aa12.3□□□□□ -0.44
HERC1-214ENST00000561400 GPR17Q13304 367 aa12.3□□□□□ -0.44
HERC1-214ENST00000561400 LAMB3Q13751 1172 aa12.3□□□□□ -0.44
HERC1-214ENST00000561400 RAB33AQ14088 237 aa12.3□□□□□ -0.44
HERC1-214ENST00000561400 PREPLQ4J6C6 727 aaPredicted RBP12.3□□□□□ -0.44
HERC1-214ENST00000561400 HGSNATQ68CP4 663 aa12.3□□□□□ -0.44
HERC1-214ENST00000561400 PDE12Q6L8Q7 609 aaKnown RBP12.3□□□□□ -0.44
HERC1-214ENST00000561400 ADGRD2Q7Z7M1 963 aa12.3□□□□□ -0.44
HERC1-214ENST00000561400 NOP9Q86U38 636 aaKnown RBP12.3□□□□□ -0.44
HERC1-214ENST00000561400 PALB2Q86YC2 1186 aa12.3□□□□□ -0.44
HERC1-214ENST00000561400 CNGA4Q8IV77 575 aa12.3□□□□□ -0.44
HERC1-214ENST00000561400 FUKQ8N0W3 1084 aa12.3□□□□□ -0.44
HERC1-214ENST00000561400 DDX1Q92499 740 aaKnown RBP12.3□□□□□ -0.44
HERC1-214ENST00000561400 SYN2Q92777 582 aaPredicted RBP12.3□□□□□ -0.44
HERC1-214ENST00000561400 CYFIP2Q96F07 1278 aa12.3□□□□□ -0.44
HERC1-214ENST00000561400 FAM161BQ96MY7 647 aa12.3□□□□□ -0.44
HERC1-214ENST00000561400 B3GNT5Q9BYG0 378 aa12.3□□□□□ -0.44
HERC1-214ENST00000561400 RHOBTB2Q9BYZ6 727 aa12.3□□□□□ -0.44
HERC1-214ENST00000561400 FAM107BQ9H098 131 aa12.3□□□□□ -0.44
HERC1-214ENST00000561400 O00370 1275 aa12.3□□□□□ -0.44
HERC1-214ENST00000561400 ATP8B1O43520 1251 aa12.3□□□□□ -0.44
HERC1-214ENST00000561400 PEX14O75381 377 aa12.3□□□□□ -0.44
HERC1-214ENST00000561400 ABLIM3O94929 683 aa12.3□□□□□ -0.44
HERC1-214ENST00000561400 FERP16591 822 aa12.3□□□□□ -0.44
HERC1-214ENST00000561400 ASIC2Q16515 512 aa12.3□□□□□ -0.44
HERC1-214ENST00000561400 SGO2Q562F6 1265 aa12.3□□□□□ -0.44
HERC1-214ENST00000561400 HABP4Q5JVS0 413 aaKnown RBP12.3□□□□□ -0.44
HERC1-214ENST00000561400 DCP1BQ8IZD4 617 aaKnown RBP12.3□□□□□ -0.44
HERC1-214ENST00000561400 ATAD1Q8NBU5 361 aa12.3□□□□□ -0.44
HERC1-214ENST00000561400 ZNF461Q8TAF7 563 aa12.3□□□□□ -0.44
HERC1-214ENST00000561400 SLC2A14Q8TDB8 520 aa12.3□□□□□ -0.44
HERC1-214ENST00000561400 SLC20A1Q8WUM9 679 aa12.3□□□□□ -0.44
HERC1-214ENST00000561400 MYLPFQ96A32 169 aa12.3□□□□□ -0.44
HERC1-214ENST00000561400 MRPL38Q96DV4 380 aaKnown RBP12.3□□□□□ -0.44
HERC1-214ENST00000561400 CRISPLD1Q9H336 500 aa12.3□□□□□ -0.44
HERC1-214ENST00000561400 MMADHCQ9H3L0 296 aaPredicted RBP12.3□□□□□ -0.44
HERC1-214ENST00000561400 NOCTQ9UK39 431 aaKnown RBP12.3□□□□□ -0.44
HERC1-214ENST00000561400 KIAA1257Q9ULG3 409 aa12.3□□□□□ -0.44
HERC1-214ENST00000561400 PYCARDQ9ULZ3 195 aa12.3□□□□□ -0.44
HERC1-214ENST00000561400 EYSQ5T1H1 3165 aa12.3□□□□□ -0.44
HERC1-214ENST00000561400 MTMR11A4FU01 709 aa12.29□□□□□ -0.44
HERC1-214ENST00000561400 PER2O15055 1255 aa12.29□□□□□ -0.44
HERC1-214ENST00000561400 THAP12O43422 761 aa12.29□□□□□ -0.44
HERC1-214ENST00000561400 PRKCIP41743 596 aa12.29□□□□□ -0.44
HERC1-214ENST00000561400 BPIFB4P59827 614 aa12.29□□□□□ -0.44
HERC1-214ENST00000561400 CYP27A1Q02318 531 aa12.29□□□□□ -0.44
HERC1-214ENST00000561400 CREMQ03060 361 aa12.29□□□□□ -0.44
HERC1-214ENST00000561400 ZNF697Q5TEC3 545 aa12.29□□□□□ -0.44
HERC1-214ENST00000561400 TMCO4Q5TGY1 634 aa12.29□□□□□ -0.44
HERC1-214ENST00000561400 ARHGAP17Q68EM7 881 aa12.29□□□□□ -0.44
HERC1-214ENST00000561400 TTC9BQ8N6N2 239 aa12.29□□□□□ -0.44
HERC1-214ENST00000561400 B4GALNT2Q8NHY0 566 aa12.29□□□□□ -0.44
HERC1-214ENST00000561400 OLIG1Q8TAK6 271 aa12.29□□□□□ -0.44
HERC1-214ENST00000561400 EMILIN2Q9BXX0 1053 aa12.29□□□□□ -0.44
HERC1-214ENST00000561400 TSGA10Q9BZW7 698 aa12.29□□□□□ -0.44
HERC1-214ENST00000561400 ZNF518BQ9C0D4 1074 aa12.29□□□□□ -0.44
HERC1-214ENST00000561400 TMEM30AQ9NV96 361 aa12.29□□□□□ -0.44
HERC1-214ENST00000561400 TPPPO94811 219 aa12.29□□□□□ -0.44
HERC1-214ENST00000561400 ADH1AP07327 375 aa12.29□□□□□ -0.44
HERC1-214ENST00000561400 PLEKP08567 350 aaPredicted RBP12.29□□□□□ -0.44
HERC1-214ENST00000561400 CHRNB2P17787 502 aa12.29□□□□□ -0.44
HERC1-214ENST00000561400 KLRC2P26717 231 aa12.29□□□□□ -0.44
HERC1-214ENST00000561400 ADORA2BP29275 332 aa12.29□□□□□ -0.44
HERC1-214ENST00000561400 LMAN1P49257 510 aa12.29□□□□□ -0.44
HERC1-214ENST00000561400 PDE6CP51160 858 aa12.29□□□□□ -0.44
HERC1-214ENST00000561400 CACNA2D1P54289 1103 aa12.29□□□□□ -0.44
HERC1-214ENST00000561400 ADCY1Q08828 1119 aa12.29□□□□□ -0.44
HERC1-214ENST00000561400 ADGRE1Q14246 886 aa12.29□□□□□ -0.44
HERC1-214ENST00000561400 MAPRE1Q15691 268 aaKnown RBP12.29□□□□□ -0.44
HERC1-214ENST00000561400 CNGA2Q16280 664 aa12.29□□□□□ -0.44
HERC1-214ENST00000561400 LILRA6Q6PI73 481 aa12.29□□□□□ -0.44
HERC1-214ENST00000561400 RBM23Q86U06 439 aaKnown RBP12.29□□□□□ -0.44
HERC1-214ENST00000561400 CHP1Q99653 195 aa12.29□□□□□ -0.44
HERC1-214ENST00000561400 HNRNPABQ99729 332 aaKnown RBP12.29□□□□□ -0.44
HERC1-214ENST00000561400 SYT11Q9BT88 431 aa12.29□□□□□ -0.44
HERC1-214ENST00000561400 HAUS4Q9H6D7 363 aa12.29□□□□□ -0.44
HERC1-214ENST00000561400 ABI2Q9NYB9 513 aaPredicted RBP12.29□□□□□ -0.44
HERC1-214ENST00000561400 ARHGAP20Q9P2F6 1191 aa12.29□□□□□ -0.44
HERC1-214ENST00000561400 TSPAN16Q9UKR8 245 aa12.29□□□□□ -0.44
HERC1-214ENST00000561400 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.29□□□□□ -0.44
HERC1-214ENST00000561400 ITM2BQ9Y287 266 aa12.29□□□□□ -0.44
HERC1-214ENST00000561400 TGM5O43548 720 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms