RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 ANXA13P27216 316 aa13.44□□□□□ -0.26
CHRNA3-208ENST00000561128 RPS9P46781 194 aaKnown RBP13.44□□□□□ -0.26
CHRNA3-208ENST00000561128 KPNA1P52294 538 aaPredicted RBP13.44□□□□□ -0.26
CHRNA3-208ENST00000561128 STX17P56962 302 aa13.44□□□□□ -0.26
CHRNA3-208ENST00000561128 SATB1Q01826 763 aa13.44□□□□□ -0.26
CHRNA3-208ENST00000561128 MESP2Q0VG99 397 aa13.44□□□□□ -0.26
CHRNA3-208ENST00000561128 ZNF268Q14587 947 aaPredicted RBP13.44□□□□□ -0.26
CHRNA3-208ENST00000561128 ZNF394Q53GI3 561 aa13.44□□□□□ -0.26
CHRNA3-208ENST00000561128 FSTL4Q6MZW2 842 aa13.44□□□□□ -0.26
CHRNA3-208ENST00000561128 CSGALNACT1Q8TDX6 532 aa13.44□□□□□ -0.26
CHRNA3-208ENST00000561128 TAF4BQ92750 862 aa13.44□□□□□ -0.26
CHRNA3-208ENST00000561128 SMARCD1Q96GM5 515 aa13.44□□□□□ -0.26
CHRNA3-208ENST00000561128 LINC00597Q9H2U6 94 aa13.44□□□□□ -0.26
CHRNA3-208ENST00000561128 LMAN1LQ9HAT1 526 aa13.44□□□□□ -0.26
CHRNA3-208ENST00000561128 DMAP1Q9NPF5 467 aaPredicted RBP13.44□□□□□ -0.26
CHRNA3-208ENST00000561128 OSER1Q9NX31 292 aa13.44□□□□□ -0.26
CHRNA3-208ENST00000561128 F5P12259 2224 aa13.44□□□□□ -0.26
CHRNA3-208ENST00000561128 CETN3O15182 167 aa13.43□□□□□ -0.26
CHRNA3-208ENST00000561128 SLC16A3O15427 465 aaKnown RBP13.43□□□□□ -0.26
CHRNA3-208ENST00000561128 CALCAP01258 141 aa13.43□□□□□ -0.26
CHRNA3-208ENST00000561128 USP17L7P0C7H9 530 aa13.43□□□□□ -0.26
CHRNA3-208ENST00000561128 MAP3K7CLP57077 242 aa13.43□□□□□ -0.26
CHRNA3-208ENST00000561128 CSTF1Q05048 431 aaKnown RBP13.43□□□□□ -0.26
CHRNA3-208ENST00000561128 ENPEPQ07075 957 aa13.43□□□□□ -0.26
CHRNA3-208ENST00000561128 RUNX3Q13761 415 aa13.43□□□□□ -0.26
CHRNA3-208ENST00000561128 EML3Q32P44 896 aa13.43□□□□□ -0.26
CHRNA3-208ENST00000561128 TCERG1LQ5VWI1 586 aa13.43□□□□□ -0.26
CHRNA3-208ENST00000561128 KRT39Q6A163 491 aa13.43□□□□□ -0.26
CHRNA3-208ENST00000561128 CLEC20AQ6ZU45 233 aa13.43□□□□□ -0.26
CHRNA3-208ENST00000561128 SFTPA1Q8IWL2 248 aa13.43□□□□□ -0.26
CHRNA3-208ENST00000561128 NELFBQ8WX92 580 aa13.43□□□□□ -0.26
CHRNA3-208ENST00000561128 KAT5Q92993 513 aa13.43□□□□□ -0.26
CHRNA3-208ENST00000561128 FBXO32Q969P5 355 aa13.43□□□□□ -0.26
CHRNA3-208ENST00000561128 CCSER2Q9H7U1 834 aa13.43□□□□□ -0.26
CHRNA3-208ENST00000561128 KIF9Q9HAQ2 790 aa13.43□□□□□ -0.26
CHRNA3-208ENST00000561128 CSNK1G1Q9HCP0 422 aa13.43□□□□□ -0.26
CHRNA3-208ENST00000561128 RAB20Q9NX57 234 aa13.43□□□□□ -0.26
CHRNA3-208ENST00000561128 IL37Q9NZH6 218 aa13.43□□□□□ -0.26
CHRNA3-208ENST00000561128 MYO15AQ9UKN7 3530 aa13.43□□□□□ -0.26
CHRNA3-208ENST00000561128 ARHGAP26Q9UNA1 814 aa13.43□□□□□ -0.26
CHRNA3-208ENST00000561128 CPQQ9Y646 472 aa13.43□□□□□ -0.26
CHRNA3-208ENST00000561128 PIEZO1Q92508 2521 aa13.42□□□□□ -0.26
CHRNA3-208ENST00000561128 LEFTY2O00292 366 aa13.42□□□□□ -0.26
CHRNA3-208ENST00000561128 MAN2B1O00754 1011 aa13.42□□□□□ -0.26
CHRNA3-208ENST00000561128 CYP26A1O43174 497 aa13.42□□□□□ -0.26
CHRNA3-208ENST00000561128 COCHO43405 550 aa13.42□□□□□ -0.26
CHRNA3-208ENST00000561128 ABL1P00519 1130 aa13.42□□□□□ -0.26
CHRNA3-208ENST00000561128 HDCP19113 662 aa13.42□□□□□ -0.26
CHRNA3-208ENST00000561128 GTF2H1P32780 548 aa13.42□□□□□ -0.26
CHRNA3-208ENST00000561128 RAD23BP54727 409 aa13.42□□□□□ -0.26
CHRNA3-208ENST00000561128 FKBP3Q00688 224 aaKnown RBP13.42□□□□□ -0.26
CHRNA3-208ENST00000561128 LRRC63Q05C16 580 aa13.42□□□□□ -0.26
CHRNA3-208ENST00000561128 LRMPQ12912 555 aa13.42□□□□□ -0.26
CHRNA3-208ENST00000561128 CCINQ13939 588 aa13.42□□□□□ -0.26
CHRNA3-208ENST00000561128 CAMK4Q16566 473 aa13.42□□□□□ -0.26
CHRNA3-208ENST00000561128 ITPRIPL2Q3MIP1 535 aa13.42□□□□□ -0.26
CHRNA3-208ENST00000561128 PPP1R26Q5T8A7 1209 aaPredicted RBP13.42□□□□□ -0.26
CHRNA3-208ENST00000561128 UNC93AQ86WB7 457 aa13.42□□□□□ -0.26
CHRNA3-208ENST00000561128 RALGPS2Q86X27 583 aaPredicted RBP13.42□□□□□ -0.26
CHRNA3-208ENST00000561128 ELOA2Q8IYF1 753 aaPredicted RBP13.42□□□□□ -0.26
CHRNA3-208ENST00000561128 NUP93Q8N1F7 819 aa13.42□□□□□ -0.26
CHRNA3-208ENST00000561128 UBR7Q8N806 425 aa13.42□□□□□ -0.26
CHRNA3-208ENST00000561128 SLC4A11Q8NBS3 891 aa13.42□□□□□ -0.26
CHRNA3-208ENST00000561128 FBXL13Q8NEE6 735 aa13.42□□□□□ -0.26
CHRNA3-208ENST00000561128 TNIP3Q96KP6 325 aa13.42□□□□□ -0.26
CHRNA3-208ENST00000561128 C8orf33Q9H7E9 229 aaPredicted RBP13.42□□□□□ -0.26
CHRNA3-208ENST00000561128 NMUR1Q9HB89 426 aa13.42□□□□□ -0.26
CHRNA3-208ENST00000561128 CISHQ9NSE2 258 aa13.42□□□□□ -0.26
CHRNA3-208ENST00000561128 TRPM5Q9NZQ8 1165 aa13.42□□□□□ -0.26
CHRNA3-208ENST00000561128 CHMP5Q9NZZ3 219 aa13.42□□□□□ -0.26
CHRNA3-208ENST00000561128 CHORDC1Q9UHD1 332 aaPredicted RBP13.42□□□□□ -0.26
CHRNA3-208ENST00000561128 COQ4Q9Y3A0 265 aa13.42□□□□□ -0.26
CHRNA3-208ENST00000561128 USP34Q70CQ2 3546 aa13.42□□□□□ -0.26
CHRNA3-208ENST00000561128 VPS13AQ96RL7 3174 aa13.41□□□□□ -0.26
CHRNA3-208ENST00000561128 FAM92AA1XBS5 289 aa13.41□□□□□ -0.26
CHRNA3-208ENST00000561128 TULP2O00295 520 aa13.41□□□□□ -0.26
CHRNA3-208ENST00000561128 LAMTOR5O43504 91 aa13.41□□□□□ -0.26
CHRNA3-208ENST00000561128 EGFP01133 1207 aa13.41□□□□□ -0.26
CHRNA3-208ENST00000561128 ZDHHC11BP0C7U3 371 aa13.41□□□□□ -0.26
CHRNA3-208ENST00000561128 CHRM1P11229 460 aaPredicted RBP13.41□□□□□ -0.26
CHRNA3-208ENST00000561128 P4HA1P13674 534 aa13.41□□□□□ -0.26
CHRNA3-208ENST00000561128 YWHAQP27348 245 aa13.41□□□□□ -0.26
CHRNA3-208ENST00000561128 GJA4P35212 333 aa13.41□□□□□ -0.26
CHRNA3-208ENST00000561128 SLC7A9P82251 487 aa13.41□□□□□ -0.26
CHRNA3-208ENST00000561128 PLCB2Q00722 1185 aa13.41□□□□□ -0.26
CHRNA3-208ENST00000561128 C12orf40Q86WS4 652 aa13.41□□□□□ -0.26
CHRNA3-208ENST00000561128 OSCP1Q8WVF1 389 aa13.41□□□□□ -0.26
CHRNA3-208ENST00000561128 NELL1Q92832 810 aa13.41□□□□□ -0.26
CHRNA3-208ENST00000561128 P2RY11Q96G91 374 aa13.41□□□□□ -0.26
CHRNA3-208ENST00000561128 CEP295NLQ96MC4 621 aa13.41□□□□□ -0.26
CHRNA3-208ENST00000561128 HNRNPABQ99729 332 aaKnown RBP13.41□□□□□ -0.26
CHRNA3-208ENST00000561128 TSG101Q99816 390 aa13.41□□□□□ -0.26
CHRNA3-208ENST00000561128 ZSWIM1Q9BR11 485 aa13.41□□□□□ -0.26
CHRNA3-208ENST00000561128 NT5C1AQ9BXI3 368 aa13.41□□□□□ -0.26
CHRNA3-208ENST00000561128 IMPG2Q9BZV3 1241 aa13.41□□□□□ -0.26
CHRNA3-208ENST00000561128 ECT2Q9H8V3 914 aa13.41□□□□□ -0.26
CHRNA3-208ENST00000561128 CYP3A43Q9HB55 503 aa13.41□□□□□ -0.26
CHRNA3-208ENST00000561128 DUS2Q9NX74 493 aaKnown RBP13.41□□□□□ -0.26
CHRNA3-208ENST00000561128 CFAP97Q9P2B7 532 aa13.41□□□□□ -0.26
CHRNA3-208ENST00000561128 MRPS17Q9Y2R5 130 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms