RNA–Protein interactions for RNA: ENST00000560721.6

ZEB1-219, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,368 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-219ENST00000560721 SH3TC2Q8TF17 1288 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 SEC14L1Q92503 715 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 SMARCD1Q96GM5 515 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 SLC39A13Q96H72 371 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 LMLNQ96KR4 655 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 OSBPL9Q96SU4 736 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 PCED1AQ9H1Q7 454 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 SLC39A2Q9NP94 309 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 PCDHA13Q9Y5I0 950 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 CAPN6Q9Y6Q1 641 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 A0A087WUV0 522 aaPredicted RBP5.72□□□□□ -1.49
ZEB1-219ENST00000560721 NPHP3-ACAD11A0A0J9YXS1 232 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 GOLGA6BA6NDN3 693 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 DRGXA6NNA5 263 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 TOR1BO14657 336 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 EIF3HO15372 352 aaKnown RBP eCLIP5.72□□□□□ -1.49
ZEB1-219ENST00000560721 IDEP14735 1019 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 CES1P23141 567 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 CLCN4P51793 760 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 NOMO3P69849 1222 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 CYP4A11Q02928 519 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 XRCC4Q13426 336 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 TRIP4Q15650 581 aaPredicted RBP5.72□□□□□ -1.49
ZEB1-219ENST00000560721 SOWAHAQ2M3V2 549 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 WDR44Q5JSH3 913 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 PPP1R26Q5T8A7 1209 aaPredicted RBP5.72□□□□□ -1.49
ZEB1-219ENST00000560721 ZNF280DQ6N043 979 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 Q6ZNB5 142 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 YTHDF3Q7Z739 585 aaKnown RBP5.72□□□□□ -1.49
ZEB1-219ENST00000560721 ITIH5Q86UX2 942 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 METTL23Q86XA0 190 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 GOLGA6L1Q8N7Z2 621 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 TBATAQ96M53 351 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 ZMAT2Q96NC0 199 aaKnown RBP5.72□□□□□ -1.49
ZEB1-219ENST00000560721 EMILIN2Q9BXX0 1053 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 S1PR5Q9H228 398 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 SMOC2Q9H3U7 446 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 APOBEC3GQ9HC16 384 aaKnown RBP5.72□□□□□ -1.49
ZEB1-219ENST00000560721 SLC2A4RGQ9NR83 387 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 TRMT13Q9NUP7 481 aaKnown RBP5.72□□□□□ -1.49
ZEB1-219ENST00000560721 OSER1Q9NX31 292 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 MAPK8IP1Q9UQF2 711 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 EXOC3O60645 756 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 ECI2O75521 394 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 VNN2O95498 520 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 GPD2P43304 727 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 CKAP5Q14008 2032 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 SWT1Q5T5J6 900 aaKnown RBP5.72□□□□□ -1.49
ZEB1-219ENST00000560721 PHLDB3Q6NSJ2 640 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 KIAA1328Q86T90 577 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 TRIM50Q86XT4 487 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 SYCE1Q8N0S2 351 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 IQCKQ8N0W5 287 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 FAM76AQ8TAV0 307 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 ASB12Q8WXK4 309 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 LRRC1Q9BTT6 524 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 DDX23Q9BUQ8 820 aaKnown RBP5.72□□□□□ -1.49
ZEB1-219ENST00000560721 VN1R3Q9BXE9 311 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 NT5C1AQ9BXI3 368 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 GCNT4Q9P109 453 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 STIM2Q9P246 746 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 GGA2Q9UJY4 613 aa5.72□□□□□ -1.49
ZEB1-219ENST00000560721 LRRIQ4A6NIV6 560 aa5.71□□□□□ -1.5
ZEB1-219ENST00000560721 KIF11P52732 1056 aa5.71□□□□□ -1.5
ZEB1-219ENST00000560721 APBA1Q02410 837 aa5.71□□□□□ -1.5
ZEB1-219ENST00000560721 AGERQ15109 404 aa5.71□□□□□ -1.5
ZEB1-219ENST00000560721 CBWD6Q4V339 395 aa5.71□□□□□ -1.5
ZEB1-219ENST00000560721 ZNF667Q5HYK9 610 aa5.71□□□□□ -1.5
ZEB1-219ENST00000560721 CBWD3Q5JTY5 395 aa5.71□□□□□ -1.5
ZEB1-219ENST00000560721 CBWD5Q5RIA9 395 aa5.71□□□□□ -1.5
ZEB1-219ENST00000560721 GALNT7Q86SF2 657 aa5.71□□□□□ -1.5
ZEB1-219ENST00000560721 NLRP8Q86W28 1048 aa5.71□□□□□ -1.5
ZEB1-219ENST00000560721 TMC8Q8IU68 726 aa5.71□□□□□ -1.5
ZEB1-219ENST00000560721 SYNPOQ8N3V7 929 aa5.71□□□□□ -1.5
ZEB1-219ENST00000560721 MRPL43Q8N983 215 aaKnown RBP5.71□□□□□ -1.5
ZEB1-219ENST00000560721 LRRC57Q8N9N7 239 aa5.71□□□□□ -1.5
ZEB1-219ENST00000560721 FAM174AQ8TBP5 190 aa5.71□□□□□ -1.5
ZEB1-219ENST00000560721 MAIP1Q8WWC4 291 aa5.71□□□□□ -1.5
ZEB1-219ENST00000560721 RIN2Q8WYP3 895 aaPredicted RBP5.71□□□□□ -1.5
ZEB1-219ENST00000560721 PSMG2Q969U7 264 aa5.71□□□□□ -1.5
ZEB1-219ENST00000560721 ZNF599Q96NL3 588 aa5.71□□□□□ -1.5
ZEB1-219ENST00000560721 TSGA13Q96PP4 275 aa5.71□□□□□ -1.5
ZEB1-219ENST00000560721 SRPK1Q96SB4 655 aaKnown RBP5.71□□□□□ -1.5
ZEB1-219ENST00000560721 AGPAT1Q99943 283 aa5.71□□□□□ -1.5
ZEB1-219ENST00000560721 ADAM2Q99965 735 aa5.71□□□□□ -1.5
ZEB1-219ENST00000560721 TLR10Q9BXR5 811 aa5.71□□□□□ -1.5
ZEB1-219ENST00000560721 EIF2AQ9BY44 585 aaKnown RBP5.71□□□□□ -1.5
ZEB1-219ENST00000560721 FOXP3Q9BZS1 431 aa5.71□□□□□ -1.5
ZEB1-219ENST00000560721 DCLK3Q9C098 648 aa5.71□□□□□ -1.5
ZEB1-219ENST00000560721 TWSG1Q9GZX9 223 aa5.71□□□□□ -1.5
ZEB1-219ENST00000560721 SFXN1Q9H9B4 322 aa5.71□□□□□ -1.5
ZEB1-219ENST00000560721 GPRC5CQ9NQ84 441 aa5.71□□□□□ -1.5
ZEB1-219ENST00000560721 HOMER3Q9NSC5 361 aa5.71□□□□□ -1.5
ZEB1-219ENST00000560721 DDX56Q9NY93 547 aaKnown RBP5.71□□□□□ -1.5
ZEB1-219ENST00000560721 GDE1Q9NZC3 331 aa5.71□□□□□ -1.5
ZEB1-219ENST00000560721 DMGDHQ9UI17 866 aaKnown RBP5.71□□□□□ -1.5
ZEB1-219ENST00000560721 HYOU1Q9Y4L1 999 aa5.71□□□□□ -1.5
ZEB1-219ENST00000560721 PCDHB12Q9Y5F1 795 aa5.71□□□□□ -1.5
ZEB1-219ENST00000560721 FANCMQ8IYD8 2048 aa5.71□□□□□ -1.5
ZEB1-219ENST00000560721 TSPAN11A1L157 253 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms