RNA–Protein interactions for RNA: ENST00000560469.5

PBX1-218, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 1,674 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-218ENST00000560469 CUL1Q13616 776 aa23.61■■□□□ 1.37
PBX1-218ENST00000560469 MAPRE1Q15691 268 aaKnown RBP23.61■■□□□ 1.37
PBX1-218ENST00000560469 CCDC142Q17RM4 750 aa23.61■■□□□ 1.37
PBX1-218ENST00000560469 TRNP1Q6NT89 227 aa23.61■■□□□ 1.37
PBX1-218ENST00000560469 FAM171BQ6P995 826 aa23.61■■□□□ 1.37
PBX1-218ENST00000560469 CCDC137Q6PK04 289 aaKnown RBP23.61■■□□□ 1.37
PBX1-218ENST00000560469 SPOCD1Q6ZMY3 1216 aa23.61■■□□□ 1.37
PBX1-218ENST00000560469 ARMC5Q96C12 935 aa23.61■■□□□ 1.37
PBX1-218ENST00000560469 FUT8Q9BYC5 575 aa23.61■■□□□ 1.37
PBX1-218ENST00000560469 UBXN6Q9BZV1 441 aa23.61■■□□□ 1.37
PBX1-218ENST00000560469 B4GALT3O60512 393 aa23.6■■□□□ 1.37
PBX1-218ENST00000560469 AP1G2O75843 785 aa23.6■■□□□ 1.37
PBX1-218ENST00000560469 TRUB2O95900 331 aaKnown RBP23.6■■□□□ 1.37
PBX1-218ENST00000560469 MYBL2P10244 700 aa23.6■■□□□ 1.37
PBX1-218ENST00000560469 CCL23P55773 120 aa23.6■■□□□ 1.37
PBX1-218ENST00000560469 TAF5Q15542 800 aa23.6■■□□□ 1.37
PBX1-218ENST00000560469 PKN2Q16513 984 aaKnown RBP23.6■■□□□ 1.37
PBX1-218ENST00000560469 CCDC14Q49A88 953 aa23.6■■□□□ 1.37
PBX1-218ENST00000560469 TXNRD3NBQ6F5E7 133 aa23.6■■□□□ 1.37
PBX1-218ENST00000560469 AENQ8WTP8 325 aaKnown RBP23.6■■□□□ 1.37
PBX1-218ENST00000560469 CASKIN2Q8WXE0 1202 aa23.6■■□□□ 1.37
PBX1-218ENST00000560469 SMARCD1Q96GM5 515 aa23.6■■□□□ 1.37
PBX1-218ENST00000560469 PLEKHA4Q9H4M7 779 aa23.6■■□□□ 1.37
PBX1-218ENST00000560469 ZWILCHQ9H900 591 aa23.6■■□□□ 1.37
PBX1-218ENST00000560469 LRRC4Q9HBW1 653 aa23.6■■□□□ 1.37
PBX1-218ENST00000560469 KLHL11Q9NVR0 708 aa23.6■■□□□ 1.37
PBX1-218ENST00000560469 USP18Q9UMW8 372 aa23.6■■□□□ 1.37
PBX1-218ENST00000560469 ZSCAN5CA6NGD5 496 aaPredicted RBP23.6■■□□□ 1.37
PBX1-218ENST00000560469 BEST1O76090 585 aa23.6■■□□□ 1.37
PBX1-218ENST00000560469 TJP3O95049 919 aa23.6■■□□□ 1.37
PBX1-218ENST00000560469 IL1R2P27930 398 aa23.6■■□□□ 1.37
PBX1-218ENST00000560469 PTPN9P43378 593 aa23.6■■□□□ 1.37
PBX1-218ENST00000560469 MAP3K7CLP57077 242 aa23.6■■□□□ 1.37
PBX1-218ENST00000560469 TSPY1Q01534 308 aa23.6■■□□□ 1.37
PBX1-218ENST00000560469 TFDP3Q5H9I0 405 aa23.6■■□□□ 1.37
PBX1-218ENST00000560469 EMBQ6PCB8 327 aa23.6■■□□□ 1.37
PBX1-218ENST00000560469 MFSD7Q6UXD7 560 aa23.6■■□□□ 1.37
PBX1-218ENST00000560469 IFT81Q8WYA0 676 aa23.6■■□□□ 1.37
PBX1-218ENST00000560469 SEC14L1Q92503 715 aa23.6■■□□□ 1.37
PBX1-218ENST00000560469 CASD1Q96PB1 797 aa23.6■■□□□ 1.37
PBX1-218ENST00000560469 HERPUD2Q9BSE4 406 aa23.6■■□□□ 1.37
PBX1-218ENST00000560469 HEMGNQ9BXL5 484 aa23.6■■□□□ 1.37
PBX1-218ENST00000560469 PPP1R12CQ9BZL4 782 aa23.6■■□□□ 1.37
PBX1-218ENST00000560469 EFR3BQ9Y2G0 817 aa23.6■■□□□ 1.37
PBX1-218ENST00000560469 LRRD1A4D1F6 860 aa23.59■■□□□ 1.37
PBX1-218ENST00000560469 PI4K2BG5E9Z4 385 aa23.59■■□□□ 1.37
PBX1-218ENST00000560469 FBXO21O94952 628 aa23.59■■□□□ 1.37
PBX1-218ENST00000560469 PTGIRP43119 386 aa23.59■■□□□ 1.37
PBX1-218ENST00000560469 CARSP49589 748 aaKnown RBP23.59■■□□□ 1.37
PBX1-218ENST00000560469 YWHAHQ04917 246 aaPredicted RBP23.59■■□□□ 1.37
PBX1-218ENST00000560469 ADIGQ0VDE8 80 aa23.59■■□□□ 1.37
PBX1-218ENST00000560469 LLGL1Q15334 1064 aa23.59■■□□□ 1.37
PBX1-218ENST00000560469 TCTN1Q2MV58 587 aa23.59■■□□□ 1.37
PBX1-218ENST00000560469 TTC27Q6P3X3 843 aa23.59■■□□□ 1.37
PBX1-218ENST00000560469 NPAS4Q8IUM7 802 aa23.59■■□□□ 1.37
PBX1-218ENST00000560469 CCDC105Q8IYK2 499 aa23.59■■□□□ 1.37
PBX1-218ENST00000560469 CLEC4CQ8WTT0 213 aa23.59■■□□□ 1.37
PBX1-218ENST00000560469 RAPGEF5Q92565 580 aa23.59■■□□□ 1.37
PBX1-218ENST00000560469 MYLPFQ96A32 169 aa23.59■■□□□ 1.37
PBX1-218ENST00000560469 CFAP57Q96MR6 1250 aa23.59■■□□□ 1.37
PBX1-218ENST00000560469 SMOQ99835 787 aa23.59■■□□□ 1.37
PBX1-218ENST00000560469 MRPL9Q9BYD2 267 aaKnown RBP23.59■■□□□ 1.37
PBX1-218ENST00000560469 BRCA2P51587 3418 aa23.59■■□□□ 1.37
PBX1-218ENST00000560469 ESYT3A0FGR9 886 aa23.58■■□□□ 1.37
PBX1-218ENST00000560469 HSF2BPO75031 334 aa23.58■■□□□ 1.37
PBX1-218ENST00000560469 CYP2C18P33260 490 aa23.58■■□□□ 1.37
PBX1-218ENST00000560469 GJA8P48165 433 aa23.58■■□□□ 1.37
PBX1-218ENST00000560469 MRPS5P82675 430 aaKnown RBP23.58■■□□□ 1.37
PBX1-218ENST00000560469 C15orf59Q2T9L4 293 aaPredicted RBP23.58■■□□□ 1.37
PBX1-218ENST00000560469 JAMLQ86YT9 394 aa23.58■■□□□ 1.37
PBX1-218ENST00000560469 GSPT2Q8IYD1 628 aaKnown RBP23.58■■□□□ 1.37
PBX1-218ENST00000560469 SIX6OS1Q8N1H7 587 aa23.58■■□□□ 1.37
PBX1-218ENST00000560469 CRIPAKQ8N1N5 446 aa23.58■■□□□ 1.37
PBX1-218ENST00000560469 CMASQ8NFW8 434 aaPredicted RBP23.58■■□□□ 1.37
PBX1-218ENST00000560469 SLCO2A1Q92959 643 aa23.58■■□□□ 1.37
PBX1-218ENST00000560469 PKMYT1Q99640 499 aa23.58■■□□□ 1.37
PBX1-218ENST00000560469 ERP44Q9BS26 406 aa23.58■■□□□ 1.37
PBX1-218ENST00000560469 DCLK3Q9C098 648 aa23.58■■□□□ 1.37
PBX1-218ENST00000560469 CSNK1G1Q9HCP0 422 aa23.58■■□□□ 1.37
PBX1-218ENST00000560469 FAM114A2Q9NRY5 505 aa23.58■■□□□ 1.37
PBX1-218ENST00000560469 DNAJB4Q9UDY4 337 aa23.58■■□□□ 1.37
PBX1-218ENST00000560469 PCSK1NQ9UHG2 260 aa23.58■■□□□ 1.37
PBX1-218ENST00000560469 FEZ2Q9UHY8 353 aaPredicted RBP23.58■■□□□ 1.37
PBX1-218ENST00000560469 TBX21Q9UL17 535 aa23.58■■□□□ 1.37
PBX1-218ENST00000560469 SCN5AQ14524 2016 aa23.58■■□□□ 1.37
PBX1-218ENST00000560469 hCG_1818297A0A087WSY0 165 aa23.57■■□□□ 1.36
PBX1-218ENST00000560469 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.57■■□□□ 1.36
PBX1-218ENST00000560469 F8W810 466 aa23.57■■□□□ 1.36
PBX1-218ENST00000560469 PRPSAP2O60256 369 aa23.57■■□□□ 1.36
PBX1-218ENST00000560469 TADA2AO75478 443 aa23.57■■□□□ 1.36
PBX1-218ENST00000560469 KDELR1P24390 212 aa23.57■■□□□ 1.36
PBX1-218ENST00000560469 CDKN2BP42772 138 aa23.57■■□□□ 1.36
PBX1-218ENST00000560469 CCNG2Q16589 344 aa23.57■■□□□ 1.36
PBX1-218ENST00000560469 DIS3LQ8TF46 1054 aaKnown RBP23.57■■□□□ 1.36
PBX1-218ENST00000560469 FAM172AQ8WUF8 416 aa23.57■■□□□ 1.36
PBX1-218ENST00000560469 DDX23Q9BUQ8 820 aaKnown RBP23.57■■□□□ 1.36
PBX1-218ENST00000560469 NRDE2Q9H7Z3 1164 aa23.57■■□□□ 1.36
PBX1-218ENST00000560469 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.57■■□□□ 1.36
PBX1-218ENST00000560469 ATP11BQ9Y2G3 1177 aa23.57■■□□□ 1.36
PBX1-218ENST00000560469 TTC3P53804 2025 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms