RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 CAPN12Q6ZSI9 719 aa14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 RFX6Q8HWS3 928 aa14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 ADGRF2Q8IZF7 708 aa14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 APPL2Q8NEU8 664 aa14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 HASPINQ8TF76 798 aa14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 MAIP1Q8WWC4 291 aa14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 SNX25Q9H3E2 840 aa14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 CDC42EP4Q9H3Q1 356 aaKnown RBP14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 DERAQ9Y315 318 aa14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 Q9Y3F1 56 aa14.78□□□□□ -0.04
CARMIL3-203ENST00000560349 C2CD4BA6NLJ0 364 aa14.77□□□□□ -0.04
CARMIL3-203ENST00000560349 GOLGA8MH3BSY2 632 aa14.77□□□□□ -0.04
CARMIL3-203ENST00000560349 SGK1O00141 431 aa14.77□□□□□ -0.04
CARMIL3-203ENST00000560349 GPD1P21695 349 aa14.77□□□□□ -0.04
CARMIL3-203ENST00000560349 KDELR1P24390 212 aa14.77□□□□□ -0.04
CARMIL3-203ENST00000560349 AXLP30530 894 aa14.77□□□□□ -0.04
CARMIL3-203ENST00000560349 TM4SF4P48230 202 aa14.77□□□□□ -0.04
CARMIL3-203ENST00000560349 TAF6P49848 677 aa14.77□□□□□ -0.04
CARMIL3-203ENST00000560349 SCNN1GP51170 649 aa14.77□□□□□ -0.04
CARMIL3-203ENST00000560349 ARSEP51690 589 aa14.77□□□□□ -0.04
CARMIL3-203ENST00000560349 MAGOHP61326 146 aaKnown RBP14.77□□□□□ -0.04
CARMIL3-203ENST00000560349 WSCD1Q658N2 575 aa14.77□□□□□ -0.04
CARMIL3-203ENST00000560349 TAF2Q6P1X5 1199 aa14.77□□□□□ -0.04
CARMIL3-203ENST00000560349 CTU1Q7Z7A3 348 aaKnown RBP14.77□□□□□ -0.04
CARMIL3-203ENST00000560349 GPBP1L1Q9HC44 474 aaPredicted RBP14.77□□□□□ -0.04
CARMIL3-203ENST00000560349 WDR35Q9P2L0 1181 aa14.77□□□□□ -0.04
CARMIL3-203ENST00000560349 ANAPC5Q9UJX4 755 aa14.77□□□□□ -0.04
CARMIL3-203ENST00000560349 NEU2Q9Y3R4 380 aa14.77□□□□□ -0.04
CARMIL3-203ENST00000560349 NDUFAB1O14561 156 aa14.77□□□□□ -0.05
CARMIL3-203ENST00000560349 SEPT4O43236 478 aa14.77□□□□□ -0.05
CARMIL3-203ENST00000560349 CDH6P55285 790 aa14.77□□□□□ -0.05
CARMIL3-203ENST00000560349 KYNUQ16719 465 aa14.77□□□□□ -0.05
CARMIL3-203ENST00000560349 HADHQ16836 314 aaKnown RBP14.77□□□□□ -0.05
CARMIL3-203ENST00000560349 CCDC14Q49A88 953 aa14.77□□□□□ -0.05
CARMIL3-203ENST00000560349 CCDC38Q502W7 563 aa14.77□□□□□ -0.05
CARMIL3-203ENST00000560349 PKDCCQ504Y2 493 aa14.77□□□□□ -0.05
CARMIL3-203ENST00000560349 LRRC38Q5VT99 294 aa14.77□□□□□ -0.05
CARMIL3-203ENST00000560349 CYP4V2Q6ZWL3 525 aaPredicted RBP14.77□□□□□ -0.05
CARMIL3-203ENST00000560349 C3orf58Q8NDZ4 430 aa14.77□□□□□ -0.05
CARMIL3-203ENST00000560349 GSTCDQ8NEC7 633 aa14.77□□□□□ -0.05
CARMIL3-203ENST00000560349 GRK7Q8WTQ7 553 aa14.77□□□□□ -0.05
CARMIL3-203ENST00000560349 SLC35F5Q8WV83 523 aa14.77□□□□□ -0.05
CARMIL3-203ENST00000560349 C9orf72Q96LT7 481 aa14.77□□□□□ -0.05
CARMIL3-203ENST00000560349 FAM107BQ9H098 131 aa14.77□□□□□ -0.05
CARMIL3-203ENST00000560349 FAM105AQ9NUU6 356 aa14.77□□□□□ -0.05
CARMIL3-203ENST00000560349 SYNJ2BP-COX16A0A087WUM0 186 aa14.76□□□□□ -0.05
CARMIL3-203ENST00000560349 TMEM88BA6NKF7 163 aa14.76□□□□□ -0.05
CARMIL3-203ENST00000560349 A6NNZ2 444 aa14.76□□□□□ -0.05
CARMIL3-203ENST00000560349 RIPK2O43353 540 aa14.76□□□□□ -0.05
CARMIL3-203ENST00000560349 MGEA5O60502 916 aa14.76□□□□□ -0.05
CARMIL3-203ENST00000560349 ADAMTS4O75173 837 aa14.76□□□□□ -0.05
CARMIL3-203ENST00000560349 BANF1O75531 89 aa14.76□□□□□ -0.05
CARMIL3-203ENST00000560349 BEST1O76090 585 aa14.76□□□□□ -0.05
CARMIL3-203ENST00000560349 LSP1P33241 339 aa14.76□□□□□ -0.05
CARMIL3-203ENST00000560349 CLCNKBP51801 687 aa14.76□□□□□ -0.05
CARMIL3-203ENST00000560349 ZNF143P52747 638 aaPredicted RBP14.76□□□□□ -0.05
CARMIL3-203ENST00000560349 GAD2Q05329 585 aa14.76□□□□□ -0.05
CARMIL3-203ENST00000560349 GPS1Q13098 491 aa14.76□□□□□ -0.05
CARMIL3-203ENST00000560349 CA9Q16790 459 aa14.76□□□□□ -0.05
CARMIL3-203ENST00000560349 TUBB8Q3ZCM7 444 aa14.76□□□□□ -0.05
CARMIL3-203ENST00000560349 LRIG3Q6UXM1 1119 aa14.76□□□□□ -0.05
CARMIL3-203ENST00000560349 FAM172AQ8WUF8 416 aa14.76□□□□□ -0.05
CARMIL3-203ENST00000560349 SLCO2A1Q92959 643 aa14.76□□□□□ -0.05
CARMIL3-203ENST00000560349 SPC25Q9HBM1 224 aa14.76□□□□□ -0.05
CARMIL3-203ENST00000560349 COX16Q9P0S2 106 aa14.76□□□□□ -0.05
CARMIL3-203ENST00000560349 TRPV2Q9Y5S1 764 aa14.76□□□□□ -0.05
CARMIL3-203ENST00000560349 SCN10AQ9Y5Y9 1956 aa14.76□□□□□ -0.05
CARMIL3-203ENST00000560349 RALGAPA2Q2PPJ7 1873 aa14.76□□□□□ -0.05
CARMIL3-203ENST00000560349 HUS1O60921 280 aa14.76□□□□□ -0.05
CARMIL3-203ENST00000560349 TRUB2O95900 331 aaKnown RBP14.76□□□□□ -0.05
CARMIL3-203ENST00000560349 MYCP01106 439 aaPredicted RBP14.76□□□□□ -0.05
CARMIL3-203ENST00000560349 POMCP01189 267 aa14.76□□□□□ -0.05
CARMIL3-203ENST00000560349 CD4P01730 458 aa14.76□□□□□ -0.05
CARMIL3-203ENST00000560349 KCNE1P15382 129 aa14.76□□□□□ -0.05
CARMIL3-203ENST00000560349 LONRF1Q17RB8 773 aa14.76□□□□□ -0.05
CARMIL3-203ENST00000560349 ZC3H18Q86VM9 953 aaKnown RBP14.76□□□□□ -0.05
CARMIL3-203ENST00000560349 KHSRPQ92945 711 aaKnown RBP eCLIP14.76□□□□□ -0.05
CARMIL3-203ENST00000560349 FAXDC2Q96IV6 333 aa14.76□□□□□ -0.05
CARMIL3-203ENST00000560349 RUNDC3BQ96NL0 473 aa14.76□□□□□ -0.05
CARMIL3-203ENST00000560349 SENP6Q9GZR1 1112 aaPredicted RBP14.76□□□□□ -0.05
CARMIL3-203ENST00000560349 DDX56Q9NY93 547 aaKnown RBP14.76□□□□□ -0.05
CARMIL3-203ENST00000560349 INPP5FQ9Y2H2 1132 aa14.76□□□□□ -0.05
CARMIL3-203ENST00000560349 CYB561D2O14569 222 aa14.75□□□□□ -0.05
CARMIL3-203ENST00000560349 KRT7P08729 469 aa14.75□□□□□ -0.05
CARMIL3-203ENST00000560349 KLRC2P26717 231 aa14.75□□□□□ -0.05
CARMIL3-203ENST00000560349 IRF5Q13568 498 aa14.75□□□□□ -0.05
CARMIL3-203ENST00000560349 PTGISQ16647 500 aa14.75□□□□□ -0.05
CARMIL3-203ENST00000560349 PPP6R3Q5H9R7 873 aaPredicted RBP14.75□□□□□ -0.05
CARMIL3-203ENST00000560349 KIAA0319Q5VV43 1072 aa14.75□□□□□ -0.05
CARMIL3-203ENST00000560349 RHBDF2Q6PJF5 856 aa14.75□□□□□ -0.05
CARMIL3-203ENST00000560349 NETO2Q8NC67 525 aa14.75□□□□□ -0.05
CARMIL3-203ENST00000560349 FNIP1Q8TF40 1166 aa14.75□□□□□ -0.05
CARMIL3-203ENST00000560349 ZNF560Q96MR9 790 aa14.75□□□□□ -0.05
CARMIL3-203ENST00000560349 WHRNQ9P202 907 aa14.75□□□□□ -0.05
CARMIL3-203ENST00000560349 CTNNAL1Q9UBT7 734 aa14.75□□□□□ -0.05
CARMIL3-203ENST00000560349 F8W810 466 aa14.75□□□□□ -0.05
CARMIL3-203ENST00000560349 TRPA1O75762 1119 aa14.75□□□□□ -0.05
CARMIL3-203ENST00000560349 IFI35P80217 286 aaPredicted RBP14.75□□□□□ -0.05
CARMIL3-203ENST00000560349 FASTKD3Q14CZ7 662 aaKnown RBP14.75□□□□□ -0.05
CARMIL3-203ENST00000560349 C1orf228Q6PIY5 440 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms