RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 TUBP50607 506 aa12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 ORC1Q13415 861 aa12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 TSR1Q2NL82 804 aaKnown RBP12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 GOLGA7BQ2TAP0 167 aa12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 PKDCCQ504Y2 493 aa12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 RAB41Q5JT25 222 aa12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 PRSS36Q5K4E3 855 aa12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 SNX30Q5VWJ9 437 aa12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 GJB7Q6PEY0 223 aa12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 MON1AQ86VX9 555 aa12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 TMC8Q8IU68 726 aa12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 ZDHHC17Q8IUH5 632 aa12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 GIPC2Q8TF65 315 aa12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 SLC35F5Q8WV83 523 aa12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 IRGQQ8WZA9 623 aa12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 KCNK16Q96T55 309 aa12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 LPIN3Q9BQK8 851 aa12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 APOL5Q9BWW9 433 aa12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 TRIM5Q9C035 493 aa12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 XPO4Q9C0E2 1151 aaKnown RBP12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 ATXN3LQ9H3M9 355 aa12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 TASP1Q9H6P5 420 aa12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 NLRC4Q9NPP4 1024 aa12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 CNGB3Q9NQW8 809 aa12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 PRDM6Q9NQX0 595 aa12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 TLR8Q9NR97 1041 aaKnown RBP12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 AIPL1Q9NZN9 384 aa12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 SCML2Q9UQR0 700 aa12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 LUC7L2Q9Y383 392 aaKnown RBP12.72□□□□□ -0.37
RABGGTA-215ENST00000560207 C19orf67A6NJJ6 358 aa12.71□□□□□ -0.37
RABGGTA-215ENST00000560207 LOC730098B7Z3J9 87 aa12.71□□□□□ -0.37
RABGGTA-215ENST00000560207 M0QYV0 167 aa12.71□□□□□ -0.37
RABGGTA-215ENST00000560207 F11P03951 625 aa12.71□□□□□ -0.37
RABGGTA-215ENST00000560207 LAMP2P13473 410 aa12.71□□□□□ -0.37
RABGGTA-215ENST00000560207 KIF11P52732 1056 aa12.71□□□□□ -0.37
RABGGTA-215ENST00000560207 SLC5A3P53794 718 aa12.71□□□□□ -0.37
RABGGTA-215ENST00000560207 ZBED6P86452 979 aa12.71□□□□□ -0.37
RABGGTA-215ENST00000560207 CDR2Q01850 454 aa12.71□□□□□ -0.37
RABGGTA-215ENST00000560207 PDE4CQ08493 712 aa12.71□□□□□ -0.37
RABGGTA-215ENST00000560207 SFMBT2Q5VUG0 894 aa12.71□□□□□ -0.37
RABGGTA-215ENST00000560207 CCDC186Q7Z3E2 898 aa12.71□□□□□ -0.37
RABGGTA-215ENST00000560207 PIGZQ86VD9 579 aa12.71□□□□□ -0.37
RABGGTA-215ENST00000560207 VPS36Q86VN1 386 aa12.71□□□□□ -0.37
RABGGTA-215ENST00000560207 DRC7Q8IY82 874 aa12.71□□□□□ -0.37
RABGGTA-215ENST00000560207 SIX6OS1Q8N1H7 587 aa12.71□□□□□ -0.37
RABGGTA-215ENST00000560207 TMEM35BQ8NCS4 154 aa12.71□□□□□ -0.37
RABGGTA-215ENST00000560207 ZMIZ2Q8NF64 920 aa12.71□□□□□ -0.37
RABGGTA-215ENST00000560207 TFAP2BQ92481 460 aa12.71□□□□□ -0.37
RABGGTA-215ENST00000560207 GOLGA1Q92805 767 aa12.71□□□□□ -0.37
RABGGTA-215ENST00000560207 FGF13Q92913 245 aa12.71□□□□□ -0.37
RABGGTA-215ENST00000560207 FBXO32Q969P5 355 aa12.71□□□□□ -0.37
RABGGTA-215ENST00000560207 MRFAP1L1Q96HT8 127 aa12.71□□□□□ -0.37
RABGGTA-215ENST00000560207 KIF9Q9HAQ2 790 aa12.71□□□□□ -0.37
RABGGTA-215ENST00000560207 TRPV4Q9HBA0 871 aa12.71□□□□□ -0.37
RABGGTA-215ENST00000560207 HCFC1R1Q9NWW0 138 aa12.71□□□□□ -0.37
RABGGTA-215ENST00000560207 OBP2AQ9NY56 170 aa12.71□□□□□ -0.37
RABGGTA-215ENST00000560207 CLIC5Q9NZA1 410 aa12.71□□□□□ -0.37
RABGGTA-215ENST00000560207 CAPN11Q9UMQ6 739 aa12.71□□□□□ -0.37
RABGGTA-215ENST00000560207 MAGED2Q9UNF1 606 aaPredicted RBP12.71□□□□□ -0.37
RABGGTA-215ENST00000560207 USP3Q9Y6I4 520 aa12.71□□□□□ -0.37
RABGGTA-215ENST00000560207 NCOR1O75376 2440 aa12.71□□□□□ -0.38
RABGGTA-215ENST00000560207 MYO10Q9HD67 2058 aa12.71□□□□□ -0.38
RABGGTA-215ENST00000560207 HHLA1C9JL84 531 aa12.7□□□□□ -0.38
RABGGTA-215ENST00000560207 SOAT2O75908 522 aa12.7□□□□□ -0.38
RABGGTA-215ENST00000560207 USP17L7P0C7H9 530 aa12.7□□□□□ -0.38
RABGGTA-215ENST00000560207 IL9P15248 144 aa12.7□□□□□ -0.38
RABGGTA-215ENST00000560207 BRD2P25440 801 aaKnown RBP12.7□□□□□ -0.38
RABGGTA-215ENST00000560207 AVPR1AP37288 418 aa12.7□□□□□ -0.38
RABGGTA-215ENST00000560207 GPD2P43304 727 aa12.7□□□□□ -0.38
RABGGTA-215ENST00000560207 RPL34P49207 117 aaKnown RBP12.7□□□□□ -0.38
RABGGTA-215ENST00000560207 KCNQ1P51787 676 aa12.7□□□□□ -0.38
RABGGTA-215ENST00000560207 PLCB2Q00722 1185 aa12.7□□□□□ -0.38
RABGGTA-215ENST00000560207 ZP2Q05996 745 aa12.7□□□□□ -0.38
RABGGTA-215ENST00000560207 ZNF268Q14587 947 aaPredicted RBP12.7□□□□□ -0.38
RABGGTA-215ENST00000560207 PM20D1Q6GTS8 502 aa12.7□□□□□ -0.38
RABGGTA-215ENST00000560207 KLHDC10Q6PID8 442 aa12.7□□□□□ -0.38
RABGGTA-215ENST00000560207 GET4Q7L5D6 327 aaPredicted RBP12.7□□□□□ -0.38
RABGGTA-215ENST00000560207 SLC47A2Q86VL8 602 aa12.7□□□□□ -0.38
RABGGTA-215ENST00000560207 TTC30AQ86WT1 665 aa12.7□□□□□ -0.38
RABGGTA-215ENST00000560207 DDX42Q86XP3 938 aaKnown RBP eCLIP12.7□□□□□ -0.38
RABGGTA-215ENST00000560207 NPAS3Q8IXF0 933 aa12.7□□□□□ -0.38
RABGGTA-215ENST00000560207 TTYH3Q9C0H2 523 aa12.7□□□□□ -0.38
RABGGTA-215ENST00000560207 IL21Q9HBE4 155 aa12.7□□□□□ -0.38
RABGGTA-215ENST00000560207 OLA1Q9NTK5 396 aaKnown RBP12.7□□□□□ -0.38
RABGGTA-215ENST00000560207 TRAV19A0A0A6YYK7 116 aa12.69□□□□□ -0.38
RABGGTA-215ENST00000560207 A0A1W2PRU2 124 aa12.69□□□□□ -0.38
RABGGTA-215ENST00000560207 ZNF840PA6NDX5 716 aa12.69□□□□□ -0.38
RABGGTA-215ENST00000560207 GFPT2O94808 682 aa12.69□□□□□ -0.38
RABGGTA-215ENST00000560207 ZBED1O96006 694 aa12.69□□□□□ -0.38
RABGGTA-215ENST00000560207 ZDHHC11BP0C7U3 371 aa12.69□□□□□ -0.38
RABGGTA-215ENST00000560207 RALAP11233 206 aa12.69□□□□□ -0.38
RABGGTA-215ENST00000560207 CDH5P33151 784 aaPredicted RBP12.69□□□□□ -0.38
RABGGTA-215ENST00000560207 PRKCIP41743 596 aa12.69□□□□□ -0.38
RABGGTA-215ENST00000560207 GPR15P49685 360 aa12.69□□□□□ -0.38
RABGGTA-215ENST00000560207 KLK7P49862 253 aa12.69□□□□□ -0.38
RABGGTA-215ENST00000560207 CACNA2D1P54289 1103 aa12.69□□□□□ -0.38
RABGGTA-215ENST00000560207 APBA1Q02410 837 aa12.69□□□□□ -0.38
RABGGTA-215ENST00000560207 GOLGA8FQ08AF8 430 aa12.69□□□□□ -0.38
RABGGTA-215ENST00000560207 GOLGA8DPQ0D2H9 430 aa12.69□□□□□ -0.38
RABGGTA-215ENST00000560207 TAF10Q12962 218 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms